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Test-Species-PubTator

Id Subject Object Predicate Lexical cue resolved_to
4 13-40 Chemical denotes 6-oxoprostaglandin F1 alpha MESH:D015121
5 42-74 Chemical denotes 6,15-dioxoprostaglandin F1 alpha -
6 80-112 Chemical denotes monohydroxyicosatetraenoic acids -
7 118-134 Chemical denotes arachidonic acid MESH:D016718
33 241-257 Chemical denotes arachidonic acid MESH:D016718
34 330-370 Chemical denotes 12-hydroxy-5,8,10-heptadecatrienoic acid MESH:C008033
35 372-413 Chemical denotes 11-hydroxy-5,8,12,14-icosatetraenoic acid -
36 415-423 Chemical denotes 11h-20:4 -
37 430-471 Chemical denotes 15-hydroxy-5,8,11,13-icosatetraenoic acid -
38 516-557 Chemical denotes 12-hydroxy-5,8,10,14-icosatetraenoic acid -
39 559-567 Chemical denotes 12h-20:4 -
40 755-763 Chemical denotes 11h-20:4 -
41 909-921 Chemical denotes indomethacin MESH:D007213
42 933-958 Chemical denotes nordihydroguaiaretic acid MESH:D009637
43 977-985 Chemical denotes 12h-20:4 -
44 1024-1036 Chemical denotes indomethacin MESH:D007213
45 1105-1133 Chemical denotes hydroxyicosatetraenoic acids -
46 1161-1171 Chemical denotes adrenaline MESH:D004837
47 1234-1250 Chemical denotes arachidonic acid MESH:D016718
48 1458-1468 Chemical denotes adrenaline MESH:D004837
49 1470-1481 Chemical denotes glutathione MESH:D005978
50 1487-1497 Chemical denotes tryptophan MESH:D014364
51 1572-1588 Chemical denotes arachidonic acid MESH:D016718
52 1592-1610 Chemical denotes 15-hydroperoxyPGI2 -
53 1685-1689 Chemical denotes PGI2 MESH:D011464
54 1712-1722 Chemical denotes 15-oxoPGI2 -
55 1741-1755 Chemical denotes hydroperoxides MESH:D006861
56 1761-1777 Chemical denotes arachidonic acid MESH:D016718
57 1821-1825 Chemical denotes PGI2 MESH:D011464

Test-Species-PubDictionaries-PubMedBERT

Id Subject Object Predicate Lexical cue db_id
T1 574-578 Species denotes also 209674
T2 684-690 Species denotes normal 2974449

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 32-40 Glycan_Motif denotes F1 alpha https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G61730RY|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G21312EA
T3 66-74 Glycan_Motif denotes F1 alpha https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G61730RY|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G21312EA
T5 280-288 Glycan_Motif denotes F1 alpha https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G61730RY|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G21312EA

sentences

Id Subject Object Predicate Lexical cue
T1 0-177 Sentence denotes Formation of 6-oxoprostaglandin F1 alpha, 6,15-dioxoprostaglandin F1 alpha, and monohydroxyicosatetraenoic acids from arachidonic acid by fetal calf aorta and ductus arteriosus.
T2 178-483 Sentence denotes Particulate fractions and slices from fetal calf aorta convert arachidonic acid to 6-oxoprostaglandin F1 alpha (6-oxoPGF1 alpha), 6,15-dioxoPGF1 alpha, 12-hydroxy-5,8,10-heptadecatrienoic acid, 11-hydroxy-5,8,12,14-icosatetraenoic acid (11h-20:4), and 15-hydroxy-5,8,11,13-icosatetraenoic acid (15h-20:4).
T3 484-588 Sentence denotes In some cases, small amounts of 12-hydroxy-5,8,10,14-icosatetraenoic acid (12h-20:4) were also detected.
T4 589-749 Sentence denotes The products were all identified by gas chromatography-mass spectrometry after purification by normal phase and argentation high pressure liquid chromatography.
T5 750-959 Sentence denotes Both 11h-20:4 and 15h-20:4 appeared to be formed by prostaglandin endoperoxide synthetase rather than by lipoxygenases, since their formation was inhibited by indomethacin but not by nordihydroguaiaretic acid.
T6 960-1087 Sentence denotes The formation of 12h-20:4, on the other hand, was stimulated by indomethacin, probably due to increased substrate availability.
T7 1088-1172 Sentence denotes The formation of hydroxyicosatetraenoic acids was markedly stimulated by adrenaline.
T8 1173-1378 Sentence denotes Substantial amounts of 6,15-dioxoPGF1 alpha were formed from arachidonic acid by particulate fractions from fetal calf blood vessels, especially in the presence of relatively high substrate concentrations.
T9 1379-1498 Sentence denotes The formation of this product was stimulated by methemoglobin and inhibited by adrenaline, glutathione, and tryptophan.
T10 1499-1723 Sentence denotes It would appear that particulate fractions from fetal calf aorta convert arachidonic acid to 15-hydroperoxyPGI2, which can either be reduced in the presence of various cofactors to form PGI2 or dehydrated to give 15-oxoPGI2.
T11 1724-1912 Sentence denotes The formation of hydroperoxides from arachidonic acid could be an important factor in regulating PGI2 synthesis in aorta, since PGI2 synthetase is strongly inhibited by such intermediates.
T1 0-177 Sentence denotes Formation of 6-oxoprostaglandin F1 alpha, 6,15-dioxoprostaglandin F1 alpha, and monohydroxyicosatetraenoic acids from arachidonic acid by fetal calf aorta and ductus arteriosus.
T2 178-483 Sentence denotes Particulate fractions and slices from fetal calf aorta convert arachidonic acid to 6-oxoprostaglandin F1 alpha (6-oxoPGF1 alpha), 6,15-dioxoPGF1 alpha, 12-hydroxy-5,8,10-heptadecatrienoic acid, 11-hydroxy-5,8,12,14-icosatetraenoic acid (11h-20:4), and 15-hydroxy-5,8,11,13-icosatetraenoic acid (15h-20:4).
T3 484-588 Sentence denotes In some cases, small amounts of 12-hydroxy-5,8,10,14-icosatetraenoic acid (12h-20:4) were also detected.
T4 589-749 Sentence denotes The products were all identified by gas chromatography-mass spectrometry after purification by normal phase and argentation high pressure liquid chromatography.
T5 750-959 Sentence denotes Both 11h-20:4 and 15h-20:4 appeared to be formed by prostaglandin endoperoxide synthetase rather than by lipoxygenases, since their formation was inhibited by indomethacin but not by nordihydroguaiaretic acid.
T6 960-1087 Sentence denotes The formation of 12h-20:4, on the other hand, was stimulated by indomethacin, probably due to increased substrate availability.
T7 1088-1172 Sentence denotes The formation of hydroxyicosatetraenoic acids was markedly stimulated by adrenaline.
T8 1173-1378 Sentence denotes Substantial amounts of 6,15-dioxoPGF1 alpha were formed from arachidonic acid by particulate fractions from fetal calf blood vessels, especially in the presence of relatively high substrate concentrations.
T9 1379-1498 Sentence denotes The formation of this product was stimulated by methemoglobin and inhibited by adrenaline, glutathione, and tryptophan.
T10 1499-1723 Sentence denotes It would appear that particulate fractions from fetal calf aorta convert arachidonic acid to 15-hydroperoxyPGI2, which can either be reduced in the presence of various cofactors to form PGI2 or dehydrated to give 15-oxoPGI2.
T11 1724-1912 Sentence denotes The formation of hydroperoxides from arachidonic acid could be an important factor in regulating PGI2 synthesis in aorta, since PGI2 synthetase is strongly inhibited by such intermediates.

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 32-40 https://glytoucan.org/Structures/Glycans/G21312EA denotes F1 alpha
T2 32-40 https://glytoucan.org/Structures/Glycans/G61730RY denotes F1 alpha
T3 66-74 https://glytoucan.org/Structures/Glycans/G21312EA denotes F1 alpha
T4 66-74 https://glytoucan.org/Structures/Glycans/G61730RY denotes F1 alpha
T5 280-288 https://glytoucan.org/Structures/Glycans/G21312EA denotes F1 alpha
T6 280-288 https://glytoucan.org/Structures/Glycans/G61730RY denotes F1 alpha

Glycosmos6-GlycoEpitope

Id Subject Object Predicate Lexical cue
T1 32-40 http://www.glycoepitope.jp/epitopes/EP0024 denotes F1 alpha
T2 66-74 http://www.glycoepitope.jp/epitopes/EP0024 denotes F1 alpha
T3 280-288 http://www.glycoepitope.jp/epitopes/EP0024 denotes F1 alpha

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 149-154 http://purl.obolibrary.org/obo/MAT_0000035 denotes aorta
T2 227-232 http://purl.obolibrary.org/obo/MAT_0000035 denotes aorta
T3 1000-1004 http://purl.obolibrary.org/obo/MAT_0000091 denotes hand
T4 1292-1305 http://purl.obolibrary.org/obo/MAT_0000393 denotes blood vessels
T5 1292-1297 http://purl.obolibrary.org/obo/MAT_0000083 denotes blood
T6 1292-1297 http://purl.obolibrary.org/obo/MAT_0000315 denotes blood
T7 1558-1563 http://purl.obolibrary.org/obo/MAT_0000035 denotes aorta
T8 1839-1844 http://purl.obolibrary.org/obo/MAT_0000035 denotes aorta

GlyCosmos15-Glycan

Id Subject Object Predicate Lexical cue image
T1 32-40 Glycan denotes F1 alpha https://api.glycosmos.org/wurcs2image/latest/png/binary/G61730RY
T2 66-74 Glycan denotes F1 alpha https://api.glycosmos.org/wurcs2image/latest/png/binary/G61730RY
T3 280-288 Glycan denotes F1 alpha https://api.glycosmos.org/wurcs2image/latest/png/binary/G61730RY

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 149-154 Body_part denotes aorta http://purl.obolibrary.org/obo/MAT_0000035
T2 227-232 Body_part denotes aorta http://purl.obolibrary.org/obo/MAT_0000035
T3 1000-1004 Body_part denotes hand http://purl.obolibrary.org/obo/MAT_0000091
T4 1292-1305 Body_part denotes blood vessels http://purl.obolibrary.org/obo/MAT_0000393
T5 1558-1563 Body_part denotes aorta http://purl.obolibrary.org/obo/MAT_0000035
T6 1839-1844 Body_part denotes aorta http://purl.obolibrary.org/obo/MAT_0000035

Glycan-GlyCosmos

Id Subject Object Predicate Lexical cue image
T1 32-40 Glycan denotes F1 alpha https://api.glycosmos.org/wurcs2image/latest/png/binary/G61730RY
T2 66-74 Glycan denotes F1 alpha https://api.glycosmos.org/wurcs2image/latest/png/binary/G61730RY
T3 280-288 Glycan denotes F1 alpha https://api.glycosmos.org/wurcs2image/latest/png/binary/G61730RY

GlyCosmos-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T1 32-40 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes F1 alpha http://www.glycoepitope.jp/epitopes/EP0024
T2 66-74 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes F1 alpha http://www.glycoepitope.jp/epitopes/EP0024
T3 280-288 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes F1 alpha http://www.glycoepitope.jp/epitopes/EP0024

GlyCosmos15-HP

Id Subject Object Predicate Lexical cue hp_id
T1 159-176 Phenotype denotes ductus arteriosus HP:0001643

GlyCosmos15-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 149-154 Body_part denotes aorta http://purl.obolibrary.org/obo/UBERON_0000947
T2 159-176 Body_part denotes ductus arteriosus http://purl.obolibrary.org/obo/UBERON_0005440
T3 227-232 Body_part denotes aorta http://purl.obolibrary.org/obo/UBERON_0000947
T4 1000-1004 Body_part denotes hand http://purl.obolibrary.org/obo/UBERON_0002398
T5 1292-1305 Body_part denotes blood vessels http://purl.obolibrary.org/obo/UBERON_0004537
T6 1558-1563 Body_part denotes aorta http://purl.obolibrary.org/obo/UBERON_0000947
T7 1839-1844 Body_part denotes aorta http://purl.obolibrary.org/obo/UBERON_0000947

GlyCosmos15-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T1 32-40 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes F1 alpha http://www.glycoepitope.jp/epitopes/EP0024
T2 66-74 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes F1 alpha http://www.glycoepitope.jp/epitopes/EP0024
T3 280-288 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes F1 alpha http://www.glycoepitope.jp/epitopes/EP0024

GlyCosmos15-Sentences

Id Subject Object Predicate Lexical cue
T1 0-177 Sentence denotes Formation of 6-oxoprostaglandin F1 alpha, 6,15-dioxoprostaglandin F1 alpha, and monohydroxyicosatetraenoic acids from arachidonic acid by fetal calf aorta and ductus arteriosus.
T2 178-483 Sentence denotes Particulate fractions and slices from fetal calf aorta convert arachidonic acid to 6-oxoprostaglandin F1 alpha (6-oxoPGF1 alpha), 6,15-dioxoPGF1 alpha, 12-hydroxy-5,8,10-heptadecatrienoic acid, 11-hydroxy-5,8,12,14-icosatetraenoic acid (11h-20:4), and 15-hydroxy-5,8,11,13-icosatetraenoic acid (15h-20:4).
T3 484-588 Sentence denotes In some cases, small amounts of 12-hydroxy-5,8,10,14-icosatetraenoic acid (12h-20:4) were also detected.
T4 589-749 Sentence denotes The products were all identified by gas chromatography-mass spectrometry after purification by normal phase and argentation high pressure liquid chromatography.
T5 750-959 Sentence denotes Both 11h-20:4 and 15h-20:4 appeared to be formed by prostaglandin endoperoxide synthetase rather than by lipoxygenases, since their formation was inhibited by indomethacin but not by nordihydroguaiaretic acid.
T6 960-1087 Sentence denotes The formation of 12h-20:4, on the other hand, was stimulated by indomethacin, probably due to increased substrate availability.
T7 1088-1172 Sentence denotes The formation of hydroxyicosatetraenoic acids was markedly stimulated by adrenaline.
T8 1173-1378 Sentence denotes Substantial amounts of 6,15-dioxoPGF1 alpha were formed from arachidonic acid by particulate fractions from fetal calf blood vessels, especially in the presence of relatively high substrate concentrations.
T9 1379-1498 Sentence denotes The formation of this product was stimulated by methemoglobin and inhibited by adrenaline, glutathione, and tryptophan.
T10 1499-1723 Sentence denotes It would appear that particulate fractions from fetal calf aorta convert arachidonic acid to 15-hydroperoxyPGI2, which can either be reduced in the presence of various cofactors to form PGI2 or dehydrated to give 15-oxoPGI2.
T11 1724-1912 Sentence denotes The formation of hydroperoxides from arachidonic acid could be an important factor in regulating PGI2 synthesis in aorta, since PGI2 synthetase is strongly inhibited by such intermediates.

GlyCosmos15-FMA

Id Subject Object Predicate Lexical cue db_id
T1 144-148 Body_part denotes calf FMA:24984
T2 149-154 Body_part denotes aorta FMA:3734
T3 159-176 Body_part denotes ductus arteriosus FMA:79871
T4 222-226 Body_part denotes calf FMA:24984
T5 227-232 Body_part denotes aorta FMA:3734
T6 1000-1004 Body_part denotes hand FMA:9712
T7 1287-1291 Body_part denotes calf FMA:24984
T8 1292-1305 Body_part denotes blood vessels FMA:63183
T9 1553-1557 Body_part denotes calf FMA:24984
T10 1558-1563 Body_part denotes aorta FMA:3734
T11 1839-1844 Body_part denotes aorta FMA:3734

GlyCosmos15-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 149-154 Body_part denotes aorta http://purl.obolibrary.org/obo/MAT_0000035
T2 227-232 Body_part denotes aorta http://purl.obolibrary.org/obo/MAT_0000035
T3 1000-1004 Body_part denotes hand http://purl.obolibrary.org/obo/MAT_0000091
T4 1292-1305 Body_part denotes blood vessels http://purl.obolibrary.org/obo/MAT_0000393
T5 1558-1563 Body_part denotes aorta http://purl.obolibrary.org/obo/MAT_0000035
T6 1839-1844 Body_part denotes aorta http://purl.obolibrary.org/obo/MAT_0000035

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 149-154 Body_part denotes aorta http://purl.obolibrary.org/obo/UBERON_0000947
T2 159-176 Body_part denotes ductus arteriosus http://purl.obolibrary.org/obo/UBERON_0005440
T3 227-232 Body_part denotes aorta http://purl.obolibrary.org/obo/UBERON_0000947
T4 1000-1004 Body_part denotes hand http://purl.obolibrary.org/obo/UBERON_0002398
T5 1292-1305 Body_part denotes blood vessels http://purl.obolibrary.org/obo/UBERON_0004537
T6 1558-1563 Body_part denotes aorta http://purl.obolibrary.org/obo/UBERON_0000947
T7 1839-1844 Body_part denotes aorta http://purl.obolibrary.org/obo/UBERON_0000947

HP-phenotype

Id Subject Object Predicate Lexical cue hp_id
T1 159-176 Phenotype denotes ductus arteriosus HP:0001643