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PubMed:6796586 JSONTXT

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Test-Species-PubTator

Id Subject Object Predicate Lexical cue resolved_to
3 32-48 Chemical denotes oligosaccharides MESH:D009844
4 65-71 Species denotes canine 9615
5 72-90 Disease denotes GM1 gangliosidosis MESH:D016537
25 165-181 Chemical denotes oligosaccharides MESH:D009844
26 257-261 Species denotes dogs 9615
27 276-294 Disease denotes GM1 gangliosidosis MESH:D016537
28 312-327 Chemical denotes oligosaccharide MESH:D009844
29 355-363 Chemical denotes charcoal MESH:D002606
30 392-404 Chemical denotes silicic acid MESH:D012824
31 517-533 Chemical denotes oligosaccharides MESH:D009844
32 561-566 Chemical denotes sugar MESH:D000073893
33 667-693 Chemical denotes oligosaccharides 1,2 and 3 -
34 695-701 Chemical denotes OS 1,2 -
35 706-710 Chemical denotes OS 3 MESH:D010126
36 889-904 Chemical denotes hexasaccharides -
37 920-934 Chemical denotes nonasaccharide -
38 969-977 Chemical denotes mannosyl -
39 1078-1094 Chemical denotes oligosaccharides MESH:D009844
40 1105-1110 Species denotes human 9606
41 1111-1129 Disease denotes GM1 gangliosidosis MESH:D016537
42 1161-1166 Species denotes human 9606
43 1207-1213 Chemical denotes GlcNAc MESH:D000117

Test-Species-PubDictionaries

Id Subject Object Predicate Lexical cue db_id
T1 257-261 OrganismTaxon denotes dogs 9615
T2 1105-1110 OrganismTaxon denotes human 9606
T3 1161-1166 OrganismTaxon denotes human 9606
T4 1363-1372 OrganismTaxon denotes mammalian 40674

Test-Species-PubDictionaries-PubMedBERT

Id Subject Object Predicate Lexical cue db_id
T1 26-31 Species denotes major 1925465
T2 65-71 Species denotes canine 9615
T3 76-90 Species denotes gangliosidosis 574000
T4 257-261 Species denotes dogs 9615
T5 280-294 Species denotes gangliosidosis 574000
T6 880-888 Species denotes isomeric 1498600
T7 1105-1110 Species denotes human 9606
T8 1115-1129 Species denotes gangliosidosis 574000
T9 1161-1166 Species denotes human 9606
T10 1363-1372 Species denotes mammalian 40674

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 72-75 Glycan_Motif denotes GM1 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G48558GR|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G46613JI
T3 276-279 Glycan_Motif denotes GM1 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G48558GR|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G46613JI
T5 1111-1114 Glycan_Motif denotes GM1 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G48558GR|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G46613JI

Glycosmos6-GlycoEpitope

Id Subject Object Predicate Lexical cue
T1 72-75 http://www.glycoepitope.jp/epitopes/EP0050 denotes GM1
T2 276-279 http://www.glycoepitope.jp/epitopes/EP0050 denotes GM1
T3 1111-1114 http://www.glycoepitope.jp/epitopes/EP0050 denotes GM1

sentences

Id Subject Object Predicate Lexical cue
T1 0-97 Sentence denotes Structure analysis of the major oligosaccharides accumulating in canine GM1 gangliosidosis liver.
T2 98-295 Sentence denotes A homologous series of structurally related, high molecular weight oligosaccharides have been isolated and purified from the livers of a mixed breed of Beagle dogs affected with GM1 gangliosidosis.
T3 296-466 Sentence denotes Five individual oligosaccharide fractions were purified by charcoal chromatography, preparative silicic acid thin layer chromatography, and gel filtration chromatography.
T4 467-590 Sentence denotes Molecular size determinations revealed that these oligosaccharides contained 6, 9, 11, and 13 sugar residues, respectively.
T5 591-844 Sentence denotes Detailed structure analysis was carried out on the most abundant fractions, oligosaccharides 1,2 and 3 (OS 1,2 and OS 3) using permethylation analysis and 360-MHz proton magnetic resonance spectroscopy coupled with sequential exoglycosidase degradation.
T6 845-983 Sentence denotes OS 1,2 was a mixture of two linear isomeric hexasaccharides and OS 3 was a nonasaccharide containing a bianntenary branched mannosyl core.
T7 984-1381 Sentence denotes The proposed structures are: (formula see text) These compounds are nearly identical with the oligosaccharides stored in human GM1 gangliosidosis liver but they differ from the human compounds uniquely since they contain 2 GlcNAc residues at the reducing terminus instead of 1, suggesting that there may be significant differences in glycoprotein metabolism or structure between mammalian species.
T1 0-97 Sentence denotes Structure analysis of the major oligosaccharides accumulating in canine GM1 gangliosidosis liver.
T2 98-295 Sentence denotes A homologous series of structurally related, high molecular weight oligosaccharides have been isolated and purified from the livers of a mixed breed of Beagle dogs affected with GM1 gangliosidosis.
T3 296-466 Sentence denotes Five individual oligosaccharide fractions were purified by charcoal chromatography, preparative silicic acid thin layer chromatography, and gel filtration chromatography.
T4 467-590 Sentence denotes Molecular size determinations revealed that these oligosaccharides contained 6, 9, 11, and 13 sugar residues, respectively.
T5 591-844 Sentence denotes Detailed structure analysis was carried out on the most abundant fractions, oligosaccharides 1,2 and 3 (OS 1,2 and OS 3) using permethylation analysis and 360-MHz proton magnetic resonance spectroscopy coupled with sequential exoglycosidase degradation.
T6 845-983 Sentence denotes OS 1,2 was a mixture of two linear isomeric hexasaccharides and OS 3 was a nonasaccharide containing a bianntenary branched mannosyl core.
T7 984-1381 Sentence denotes The proposed structures are: (formula see text) These compounds are nearly identical with the oligosaccharides stored in human GM1 gangliosidosis liver but they differ from the human compounds uniquely since they contain 2 GlcNAc residues at the reducing terminus instead of 1, suggesting that there may be significant differences in glycoprotein metabolism or structure between mammalian species.

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 72-75 https://glytoucan.org/Structures/Glycans/G46613JI denotes GM1
T2 72-75 https://glytoucan.org/Structures/Glycans/G48558GR denotes GM1
T3 276-279 https://glytoucan.org/Structures/Glycans/G46613JI denotes GM1
T4 276-279 https://glytoucan.org/Structures/Glycans/G48558GR denotes GM1
T5 1111-1114 https://glytoucan.org/Structures/Glycans/G46613JI denotes GM1
T6 1111-1114 https://glytoucan.org/Structures/Glycans/G48558GR denotes GM1

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 91-96 http://purl.obolibrary.org/obo/MAT_0000097 denotes liver
T2 223-229 http://purl.obolibrary.org/obo/MAT_0000097 denotes livers
T3 1130-1135 http://purl.obolibrary.org/obo/MAT_0000097 denotes liver

NGLY1-deficiency

Id Subject Object Predicate Lexical cue
PD-NGLY1-deficiency-B_T1 1207-1213 chem:24139 denotes GlcNAc

GlyCosmos15-Glycan

Id Subject Object Predicate Lexical cue image
T1 72-75 Glycan denotes GM1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G48558GR
T2 276-279 Glycan denotes GM1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G48558GR
T3 1111-1114 Glycan denotes GM1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G48558GR

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 72-90 Disease denotes GM1 gangliosidosis http://purl.obolibrary.org/obo/MONDO_0018149
T2 276-294 Disease denotes GM1 gangliosidosis http://purl.obolibrary.org/obo/MONDO_0018149
T3 1111-1129 Disease denotes GM1 gangliosidosis http://purl.obolibrary.org/obo/MONDO_0018149

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 91-96 Body_part denotes liver http://purl.obolibrary.org/obo/MAT_0000097
T2 223-229 Body_part denotes livers http://purl.obolibrary.org/obo/MAT_0000097
T3 1130-1135 Body_part denotes liver http://purl.obolibrary.org/obo/MAT_0000097

Glycan-GlyCosmos

Id Subject Object Predicate Lexical cue image
T1 72-75 Glycan denotes GM1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G48558GR
T2 276-279 Glycan denotes GM1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G48558GR
T3 1111-1114 Glycan denotes GM1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G48558GR

GlyCosmos-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T1 72-75 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GM1 http://www.glycoepitope.jp/epitopes/EP0050
T2 276-279 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GM1 http://www.glycoepitope.jp/epitopes/EP0050
T3 1111-1114 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GM1 http://www.glycoepitope.jp/epitopes/EP0050

GlyCosmos15-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 72-90 Disease denotes GM1 gangliosidosis MONDO:0018149
T2 276-294 Disease denotes GM1 gangliosidosis MONDO:0018149
T3 1111-1129 Disease denotes GM1 gangliosidosis MONDO:0018149

GlyCosmos15-Taxon

Id Subject Object Predicate Lexical cue db_id
T1 257-261 Organism denotes dogs 9615
T2 1105-1110 Organism denotes human 9606
T3 1161-1166 Organism denotes human 9606
T4 1363-1372 Organism denotes mammalian 40674

GlyCosmos15-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T1 72-75 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GM1 http://www.glycoepitope.jp/epitopes/EP0050
T2 276-279 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GM1 http://www.glycoepitope.jp/epitopes/EP0050
T3 1111-1114 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GM1 http://www.glycoepitope.jp/epitopes/EP0050

GlyCosmos15-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 65-71 Body_part denotes canine http://purl.obolibrary.org/obo/UBERON_0003674
T2 91-96 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T3 1130-1135 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107

GlyCosmos15-Sentences

Id Subject Object Predicate Lexical cue
T1 0-97 Sentence denotes Structure analysis of the major oligosaccharides accumulating in canine GM1 gangliosidosis liver.
T2 98-295 Sentence denotes A homologous series of structurally related, high molecular weight oligosaccharides have been isolated and purified from the livers of a mixed breed of Beagle dogs affected with GM1 gangliosidosis.
T3 296-466 Sentence denotes Five individual oligosaccharide fractions were purified by charcoal chromatography, preparative silicic acid thin layer chromatography, and gel filtration chromatography.
T4 467-590 Sentence denotes Molecular size determinations revealed that these oligosaccharides contained 6, 9, 11, and 13 sugar residues, respectively.
T5 591-844 Sentence denotes Detailed structure analysis was carried out on the most abundant fractions, oligosaccharides 1,2 and 3 (OS 1,2 and OS 3) using permethylation analysis and 360-MHz proton magnetic resonance spectroscopy coupled with sequential exoglycosidase degradation.
T6 845-983 Sentence denotes OS 1,2 was a mixture of two linear isomeric hexasaccharides and OS 3 was a nonasaccharide containing a bianntenary branched mannosyl core.
T7 984-1381 Sentence denotes The proposed structures are: (formula see text) These compounds are nearly identical with the oligosaccharides stored in human GM1 gangliosidosis liver but they differ from the human compounds uniquely since they contain 2 GlcNAc residues at the reducing terminus instead of 1, suggesting that there may be significant differences in glycoprotein metabolism or structure between mammalian species.

GlyCosmos15-FMA

Id Subject Object Predicate Lexical cue db_id
T1 91-96 Body_part denotes liver FMA:7197
T2 1130-1135 Body_part denotes liver FMA:7197

GlyCosmos15-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 91-96 Body_part denotes liver http://purl.obolibrary.org/obo/MAT_0000097
T2 223-229 Body_part denotes livers http://purl.obolibrary.org/obo/MAT_0000097
T3 1130-1135 Body_part denotes liver http://purl.obolibrary.org/obo/MAT_0000097

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 257-261 OrganismTaxon denotes dogs 9615
T2 1105-1110 OrganismTaxon denotes human 9606
T3 1161-1166 OrganismTaxon denotes human 9606

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 65-71 Body_part denotes canine http://purl.obolibrary.org/obo/UBERON_0003674
T2 91-96 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T3 410-415 Body_part denotes layer http://purl.obolibrary.org/obo/UBERON_0000119|http://purl.obolibrary.org/obo/UBERON_0022303
T5 1130-1135 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107