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PubMed:6222769 JSONTXT

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Test-Species-PubTator

Id Subject Object Predicate Lexical cue resolved_to
1 91-97 Species denotes bovine 9913
12 159-165 Species denotes bovine 9913
13 358-381 Chemical denotes guanidine hydrochloride MESH:D019791
14 427-431 Chemical denotes CsCl MESH:C028019
15 745-758 Chemical denotes guanidine-HCl MESH:D019791
16 798-802 Chemical denotes CsCl MESH:C028019
17 1014-1029 Chemical denotes Sepharose CL-6B MESH:C047264
18 1322-1342 Disease denotes platelet aggregation MESH:D001791
19 1748-1752 Chemical denotes Ca2+ -
20 1987-1994 Chemical denotes sulfate MESH:D013431
21 2327-2350 Disease denotes cardiovascular diseases MESH:D002318

Test-Species-PubDictionaries

Id Subject Object Predicate Lexical cue db_id
T1 91-97 OrganismTaxon denotes bovine 9913
T2 159-165 OrganismTaxon denotes bovine 9913

Test-Species-PubDictionaries-PubMedBERT

Id Subject Object Predicate Lexical cue db_id
T1 91-97 Species denotes bovine 9913
T2 136-141 Species denotes major 1925465
T3 159-165 Species denotes bovine 9913
T4 226-234 Species denotes dermatan 2338555
T5 693-701 Species denotes dermatan 2338555
T6 948-956 Species denotes dermatan 2338555
T7 1030-1036 Species denotes column 48766
T8 1142-1145 Species denotes kav 130404
T9 1200-1203 Species denotes kav 130404
T10 1394-1402 Species denotes dermatan 2338555
T11 1687-1695 Species denotes dermatan 2338555
T12 1815-1819 Species denotes also 209674
T13 1920-1928 Species denotes dermatan 2338555

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 98-103 Body_part denotes aorta http://purl.obolibrary.org/obo/MAT_0000035
T2 166-171 Body_part denotes aorta http://purl.obolibrary.org/obo/MAT_0000035
T3 397-402 Body_part denotes aorta http://purl.obolibrary.org/obo/MAT_0000035
T4 773-778 Body_part denotes aorta http://purl.obolibrary.org/obo/MAT_0000035

GlyCosmos15-Glycan

Id Subject Object Predicate Lexical cue image
T1 206-217 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T2 673-684 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T3 928-939 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T4 1374-1385 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T5 1667-1678 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T6 1900-1911 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T7 57-72 Glycan denotes heparan sulfate https://api.glycosmos.org/wurcs2image/latest/png/binary/G17927IW
T8 173-188 Glycan denotes heparan sulfate https://api.glycosmos.org/wurcs2image/latest/png/binary/G17927IW
T10 275-290 Glycan denotes heparan sulfate https://api.glycosmos.org/wurcs2image/latest/png/binary/G17927IW
T11 583-598 Glycan denotes heparan sulfate https://api.glycosmos.org/wurcs2image/latest/png/binary/G17927IW
T13 862-877 Glycan denotes heparan sulfate https://api.glycosmos.org/wurcs2image/latest/png/binary/G17927IW
T15 1042-1057 Glycan denotes heparan sulfate https://api.glycosmos.org/wurcs2image/latest/png/binary/G17927IW
T16 1226-1241 Glycan denotes heparan sulfate https://api.glycosmos.org/wurcs2image/latest/png/binary/G17927IW
T18 1569-1584 Glycan denotes heparan sulfate https://api.glycosmos.org/wurcs2image/latest/png/binary/G17927IW
T20 1774-1789 Glycan denotes heparan sulfate https://api.glycosmos.org/wurcs2image/latest/png/binary/G17927IW
T22 2121-2136 Glycan denotes heparan sulfate https://api.glycosmos.org/wurcs2image/latest/png/binary/G17927IW

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 226-255 Disease denotes dermatan sulfate proteoglycan http://purl.obolibrary.org/obo/MONDO_0007526|http://purl.obolibrary.org/obo/MONDO_0020682
T3 693-722 Disease denotes dermatan sulfate proteoglycan http://purl.obolibrary.org/obo/MONDO_0007526|http://purl.obolibrary.org/obo/MONDO_0020682
T5 948-977 Disease denotes dermatan sulfate proteoglycan http://purl.obolibrary.org/obo/MONDO_0007526|http://purl.obolibrary.org/obo/MONDO_0020682
T7 1394-1423 Disease denotes dermatan sulfate proteoglycan http://purl.obolibrary.org/obo/MONDO_0007526|http://purl.obolibrary.org/obo/MONDO_0020682
T9 1687-1716 Disease denotes dermatan sulfate proteoglycan http://purl.obolibrary.org/obo/MONDO_0007526|http://purl.obolibrary.org/obo/MONDO_0020682
T11 1920-1949 Disease denotes dermatan sulfate proteoglycan http://purl.obolibrary.org/obo/MONDO_0007526|http://purl.obolibrary.org/obo/MONDO_0020682
T13 2327-2350 Disease denotes cardiovascular diseases http://purl.obolibrary.org/obo/MONDO_0004995

HP-phenotype

Id Subject Object Predicate Lexical cue hp_id
T1 2327-2350 Phenotype denotes cardiovascular diseases HP:0001626

Glycan-GlyCosmos

Id Subject Object Predicate Lexical cue image
T1 206-217 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T2 673-684 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T3 928-939 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T4 1374-1385 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T5 1667-1678 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T6 1900-1911 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T7 57-72 Glycan denotes heparan sulfate https://api.glycosmos.org/wurcs2image/latest/png/binary/G17927IW
T8 173-188 Glycan denotes heparan sulfate https://api.glycosmos.org/wurcs2image/latest/png/binary/G17927IW
T10 275-290 Glycan denotes heparan sulfate https://api.glycosmos.org/wurcs2image/latest/png/binary/G17927IW
T11 583-598 Glycan denotes heparan sulfate https://api.glycosmos.org/wurcs2image/latest/png/binary/G17927IW
T13 862-877 Glycan denotes heparan sulfate https://api.glycosmos.org/wurcs2image/latest/png/binary/G17927IW
T15 1042-1057 Glycan denotes heparan sulfate https://api.glycosmos.org/wurcs2image/latest/png/binary/G17927IW
T16 1226-1241 Glycan denotes heparan sulfate https://api.glycosmos.org/wurcs2image/latest/png/binary/G17927IW
T18 1569-1584 Glycan denotes heparan sulfate https://api.glycosmos.org/wurcs2image/latest/png/binary/G17927IW
T20 1774-1789 Glycan denotes heparan sulfate https://api.glycosmos.org/wurcs2image/latest/png/binary/G17927IW
T22 2121-2136 Glycan denotes heparan sulfate https://api.glycosmos.org/wurcs2image/latest/png/binary/G17927IW

GlyCosmos-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T1 57-72 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes heparan sulfate http://www.glycoepitope.jp/epitopes/EP0086
T2 173-188 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes heparan sulfate http://www.glycoepitope.jp/epitopes/EP0086
T3 206-217 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T4 275-290 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes heparan sulfate http://www.glycoepitope.jp/epitopes/EP0086
T5 583-598 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes heparan sulfate http://www.glycoepitope.jp/epitopes/EP0086
T6 673-684 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T7 862-877 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes heparan sulfate http://www.glycoepitope.jp/epitopes/EP0086
T8 928-939 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T9 1042-1057 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes heparan sulfate http://www.glycoepitope.jp/epitopes/EP0086
T10 1226-1241 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes heparan sulfate http://www.glycoepitope.jp/epitopes/EP0086
T11 1374-1385 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T12 1569-1584 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes heparan sulfate http://www.glycoepitope.jp/epitopes/EP0086
T13 1667-1678 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T14 1774-1789 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes heparan sulfate http://www.glycoepitope.jp/epitopes/EP0086
T15 1900-1911 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T16 2121-2136 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes heparan sulfate http://www.glycoepitope.jp/epitopes/EP0086

GlyCosmos15-HP

Id Subject Object Predicate Lexical cue hp_id
T1 2327-2350 Phenotype denotes cardiovascular diseases HP:0001626

GlyCosmos15-CL

Id Subject Object Predicate Lexical cue cl_id
T1 1322-1330 Cell denotes platelet http://purl.obolibrary.org/obo/CL:0000233

GlyCosmos15-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 98-103 Body_part denotes aorta http://purl.obolibrary.org/obo/UBERON_0000947
T2 166-171 Body_part denotes aorta http://purl.obolibrary.org/obo/UBERON_0000947
T3 397-402 Body_part denotes aorta http://purl.obolibrary.org/obo/UBERON_0000947
T4 403-409 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T5 619-625 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T6 773-778 Body_part denotes aorta http://purl.obolibrary.org/obo/UBERON_0000947
T7 779-785 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T8 1322-1330 Body_part denotes platelet http://purl.obolibrary.org/obo/CL_0000233

GlyCosmos15-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 226-255 Disease denotes dermatan sulfate proteoglycan MONDO:0007526|MONDO:0020682
T3 693-722 Disease denotes dermatan sulfate proteoglycan MONDO:0007526|MONDO:0020682
T5 948-977 Disease denotes dermatan sulfate proteoglycan MONDO:0007526|MONDO:0020682
T7 1394-1423 Disease denotes dermatan sulfate proteoglycan MONDO:0007526|MONDO:0020682
T9 1687-1716 Disease denotes dermatan sulfate proteoglycan MONDO:0007526|MONDO:0020682
T11 1920-1949 Disease denotes dermatan sulfate proteoglycan MONDO:0007526|MONDO:0020682
T13 2327-2350 Disease denotes cardiovascular diseases MONDO:0004995

GlyCosmos15-Taxon

Id Subject Object Predicate Lexical cue db_id
T1 91-97 Organism denotes bovine 9913
T2 159-165 Organism denotes bovine 9913

GlyCosmos15-Sentences

Id Subject Object Predicate Lexical cue
T1 0-104 Sentence denotes Hemostatic properties and serum lipoprotein binding of a heparan sulfate proteoglycan from bovine aorta.
T2 105-270 Sentence denotes The biologic properties of two major proteoglycans of bovine aorta, heparan sulfate proteoglycan and chondroitin sulfate-dermatan sulfate proteoglycan were compared.
T3 271-502 Sentence denotes The heparan sulfate proteoglycan was isolated either by elastase digestion or by 4.0 M guanidine hydrochloride extraction, of aorta tissue, fractionated by CsCl isopycnic centrifugation and purified by chondroitinase ABC treatment.
T4 503-668 Sentence denotes The first method resulted in considerably greater yield (about 70% of the total heparan sulfate proteoglycan of the tissue) than the second procedure (12% of total).
T5 669-828 Sentence denotes The chondroitin sulfate-dermatan sulfate proteoglycan was obtained by 4.0 M guanidine-HCl extraction of aorta tissue followed by CsCl isopycnic centrifugation.
T6 829-916 Sentence denotes The chemical composition of both heparan sulfate proteoglycan preparations was similar.
T7 917-1221 Sentence denotes Unlike the chondroitin sulfate-dermatan sulfate proteoglycan, which eluted in the void volume of Sepharose CL-6B column, the heparan sulfate proteoglycan preparations were each resolved into a high molecular weight fraction (kav = 0.18 and 0.13) and a low molecular weight fraction (kav = 0.47 and 0.36).
T8 1222-1424 Sentence denotes The heparan sulfate proteoglycan preparations exhibited significantly more potent anticoagulant and platelet aggregation inhibitory activities than the chondroitin sulfate-dermatan sulfate proteoglycan.
T9 1425-1533 Sentence denotes The protein core of the proteoglycan molecules did not seem to be essential for their hemostatic properties.
T10 1534-1753 Sentence denotes The complex forming ability of the heparan sulfate proteoglycan with serum low density lipoproteins (LDL) was much less than that of chondroitin sulfate-dermatan sulfate proteoglycan in the presence and absence of Ca2+.
T11 1754-1970 Sentence denotes Interaction between heparan sulfate proteoglycan and LDL was also much more sensitive to changes in the ionic strength of the medium than that of chondroitin sulfate-dermatan sulfate proteoglycan and the lipoprotein.
T12 1971-2212 Sentence denotes Since the total sulfate content of both proteoglycans is almost similar, the smaller molecular size and hence the lower overall charge density of the heparan sulfate proteoglycan appears to be partly responsible for its low affinity for LDL.
T13 2213-2351 Sentence denotes The differences in biologic properties of the two proteoglycans might have implications in the pathophysiology of cardiovascular diseases.

GlyCosmos15-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T1 57-72 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes heparan sulfate http://www.glycoepitope.jp/epitopes/EP0086
T2 173-188 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes heparan sulfate http://www.glycoepitope.jp/epitopes/EP0086
T3 206-217 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T4 275-290 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes heparan sulfate http://www.glycoepitope.jp/epitopes/EP0086
T5 583-598 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes heparan sulfate http://www.glycoepitope.jp/epitopes/EP0086
T6 673-684 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T7 862-877 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes heparan sulfate http://www.glycoepitope.jp/epitopes/EP0086
T8 928-939 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T9 1042-1057 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes heparan sulfate http://www.glycoepitope.jp/epitopes/EP0086
T10 1226-1241 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes heparan sulfate http://www.glycoepitope.jp/epitopes/EP0086
T11 1374-1385 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T12 1569-1584 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes heparan sulfate http://www.glycoepitope.jp/epitopes/EP0086
T13 1667-1678 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T14 1774-1789 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes heparan sulfate http://www.glycoepitope.jp/epitopes/EP0086
T15 1900-1911 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T16 2121-2136 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes heparan sulfate http://www.glycoepitope.jp/epitopes/EP0086

GlyCosmos15-FMA

Id Subject Object Predicate Lexical cue db_id
T1 26-31 Body_part denotes serum FMA:63083
T2 98-103 Body_part denotes aorta FMA:3734
T3 166-171 Body_part denotes aorta FMA:3734
T4 397-402 Body_part denotes aorta FMA:3734
T5 403-409 Body_part denotes tissue FMA:9637
T6 619-625 Body_part denotes tissue FMA:9637
T7 773-778 Body_part denotes aorta FMA:3734
T8 779-785 Body_part denotes tissue FMA:9637
T9 1322-1330 Body_part denotes platelet FMA:62851
T10 1603-1608 Body_part denotes serum FMA:63083

GlyCosmos15-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 98-103 Body_part denotes aorta http://purl.obolibrary.org/obo/MAT_0000035
T2 166-171 Body_part denotes aorta http://purl.obolibrary.org/obo/MAT_0000035
T3 397-402 Body_part denotes aorta http://purl.obolibrary.org/obo/MAT_0000035
T4 773-778 Body_part denotes aorta http://purl.obolibrary.org/obo/MAT_0000035

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 91-97 OrganismTaxon denotes bovine 9913
T2 159-165 OrganismTaxon denotes bovine 9913

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 98-103 Body_part denotes aorta http://purl.obolibrary.org/obo/UBERON_0000947
T2 166-171 Body_part denotes aorta http://purl.obolibrary.org/obo/UBERON_0000947
T3 397-402 Body_part denotes aorta http://purl.obolibrary.org/obo/UBERON_0000947
T4 403-409 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T5 619-625 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T6 773-778 Body_part denotes aorta http://purl.obolibrary.org/obo/UBERON_0000947
T7 779-785 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T8 1322-1330 Body_part denotes platelet http://purl.obolibrary.org/obo/CL_0000233

CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 1322-1330 Cell denotes platelet http://purl.obolibrary.org/obo/CL:0000233