PubMed:40610
Annnotations
Test-Species-PubTator
| Id | Subject | Object | Predicate | Lexical cue | resolved_to |
|---|---|---|---|---|---|
| 1 | 47-60 | Gene | denotes | neuraminidase | 4758 |
| 25 | 122-135 | Gene | denotes | neuraminidase | 4758 |
| 26 | 139-144 | Species | denotes | human | 9606 |
| 27 | 234-256 | Chemical | denotes | sialyloligosaccharides | MESH:C016735 |
| 28 | 258-289 | Chemical | denotes | alpha(2 lead to 3)sialyllactose | - |
| 29 | 291-323 | Chemical | denotes | alpha(2 leads to 6)sialyllactose | - |
| 30 | 325-340 | Chemical | denotes | disialyllactose | MESH:C509062 |
| 31 | 343-361 | Chemical | denotes | sialylglycoplipids | - |
| 32 | 363-387 | Chemical | denotes | disialogangliosides GD1a | - |
| 33 | 392-396 | Chemical | denotes | GD1b | - |
| 34 | 399-418 | Chemical | denotes | sialylglycoproteins | - |
| 35 | 423-442 | Chemical | denotes | sialylglycopeptides | - |
| 36 | 579-602 | Chemical | denotes | N-acetylneuraminic acid | MESH:D019158 |
| 37 | 604-609 | Chemical | denotes | NeuAc | MESH:D019158 |
| 38 | 681-703 | Chemical | denotes | sialyloligosaccharides | MESH:C016735 |
| 39 | 728-740 | Chemical | denotes | Triton X-100 | MESH:D017830 |
| 40 | 745-757 | Chemical | denotes | gangliosides | MESH:D005732 |
| 41 | 795-814 | Chemical | denotes | sialylglycoproteins | - |
| 42 | 819-838 | Chemical | denotes | sialylglycopeptides | - |
| 43 | 920-942 | Chemical | denotes | sialyloligosaccharides | MESH:C016735 |
| 44 | 971-983 | Chemical | denotes | gangliosides | MESH:D005732 |
| 45 | 1048-1080 | Chemical | denotes | alpha(2 leads to 3)sialyllactose | - |
| 46 | 1271-1276 | Chemical | denotes | NeuAc | MESH:D019158 |
| 47 | 1346-1378 | Chemical | denotes | alpha(2 leads to 3)sialyllactose | - |
Test-Species-PubDictionaries
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 139-144 | OrganismTaxon | denotes | human | 9606 |
Test-Species-PubDictionaries-PubMedBERT
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 139-144 | Species | denotes | human | 9606 |
| T2 | 672-677 | Species | denotes | acted | 443555 |
| T3 | 728-734 | Species | denotes | Triton | 385657 |
| T4 | 745-757 | Species | denotes | gangliosides | 2904946 |
| T5 | 971-983 | Species | denotes | gangliosides | 2904946 |
| T6 | 1136-1140 | Species | denotes | time | 269157 |
GlyCosmos15-Glycan
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 383-387 | Glycan | denotes | GD1a | https://api.glycosmos.org/wurcs2image/latest/png/binary/G46677TE |
| T2 | 392-396 | Glycan | denotes | GD1b | https://api.glycosmos.org/wurcs2image/latest/png/binary/G37184KW |
| T3 | 604-609 | Glycan | denotes | NeuAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR |
| T4 | 1271-1276 | Glycan | denotes | NeuAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR |
Glycan-GlyCosmos
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 383-387 | Glycan | denotes | GD1a | https://api.glycosmos.org/wurcs2image/latest/png/binary/G46677TE |
| T2 | 392-396 | Glycan | denotes | GD1b | https://api.glycosmos.org/wurcs2image/latest/png/binary/G37184KW |
| T3 | 604-609 | Glycan | denotes | NeuAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR |
| T4 | 1271-1276 | Glycan | denotes | NeuAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR |
GlyCosmos-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 383-387 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | GD1a | http://www.glycoepitope.jp/epitopes/EP0056 |
| T2 | 392-396 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | GD1b | http://www.glycoepitope.jp/epitopes/EP0059 |
Organism-PubDic
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 139-144 | Species | denotes | human | 9606 |
Organism-PubTator
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 139-144 | Species | denotes | human | 9606 |
Organism-PubDic-Bert-9
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 139-144 | Species | denotes | human | 9606 |
Organism-PubDic-Bert-8
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 139-144 | Species | denotes | human | 9606 |
| T2 | 672-677 | Species | denotes | acted | 443555 |
| T3 | 728-734 | Species | denotes | Triton | 385657 |
| T4 | 745-757 | Species | denotes | gangliosides | 2904946 |
| T5 | 971-983 | Species | denotes | gangliosides | 2904946 |
| T6 | 1136-1140 | Species | denotes | time | 269157 |
Organism-Gold
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 139-144 | Species | denotes | human | 9606 |
GlyCosmos15-CL
| Id | Subject | Object | Predicate | Lexical cue | cl_id |
|---|---|---|---|---|---|
| T1 | 36-46 | Cell | denotes | fibroblast | http://purl.obolibrary.org/obo/CL:0000057 |
| T2 | 154-165 | Cell | denotes | fibroblasts | http://purl.obolibrary.org/obo/CL:0000057 |
| T3 | 1329-1340 | Cell | denotes | fibroblasts | http://purl.obolibrary.org/obo/CL:0000057 |
GlyCosmos15-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 36-46 | Body_part | denotes | fibroblast | http://purl.obolibrary.org/obo/CL_0000057 |
| T2 | 154-165 | Body_part | denotes | fibroblasts | http://purl.obolibrary.org/obo/CL_0000057 |
| T3 | 1329-1340 | Body_part | denotes | fibroblasts | http://purl.obolibrary.org/obo/CL_0000057 |
GlyCosmos15-Taxon
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 139-144 | Organism | denotes | human | 9606 |
GlyCosmos15-Sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-95 | Sentence | denotes | Optimal conditions for the assay of fibroblast neuraminidase with different natural substrates. |
| T2 | 96-186 | Sentence | denotes | A method for the assay of neuraminidase in human cultured fibroblasts has been worked out. |
| T3 | 187-507 | Sentence | denotes | The substrates, all naturally occurring, were: sialyloligosaccharides (alpha(2 lead to 3)sialyllactose, alpha(2 leads to 6)sialyllactose, disialyllactose), sialylglycoplipids (disialogangliosides GD1a and GD1b), sialylglycoproteins and sialylglycopeptides (ovine submaxillary glycoprotein and its pronase-glycopeptides). |
| T4 | 508-660 | Sentence | denotes | The method was based on the determination of the enzymically liberated N-acetylneuraminic acid (NeuAc) by a chromatographic-colorimetric microprocedure. |
| T5 | 661-839 | Sentence | denotes | The enzyme acted on sialyloligosaccharides and, in the presence of Triton X-100, on gangliosides, while it did not appreciably affect sialylglycoproteins and sialylglycopeptides. |
| T6 | 840-1197 | Sentence | denotes | The optimum pH was 4.0 for all tested substrates; the Km values were higher for sialyloligosaccharides (about 10(-3) M), lower for gangliosides (about 10(-4) M); the apparent maximum velocity was higher with alpha(2 leads to 3)sialyllactose (400 mU/mg protein); the reaction rate was linear with time for up to 2 h, and with up to 0.6 mg of enzymic protein. |
| T7 | 1198-1379 | Sentence | denotes | The assay method proved to be sufficiently sensitive (3-4 nmol liberated NeuAc), simple, and reproducible (mean activity on pooled fibroblasts with alpha(2 leads to 3)sialyllactose: |
| T8 | 1380-1399 | Sentence | denotes | 400 mU +/- 6 S.E.). |
GlyCosmos15-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 383-387 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | GD1a | http://www.glycoepitope.jp/epitopes/EP0056 |
| T2 | 392-396 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | GD1b | http://www.glycoepitope.jp/epitopes/EP0059 |
GlyCosmos15-FMA
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 36-46 | Body_part | denotes | fibroblast | FMA:63877 |
| T2 | 154-165 | Body_part | denotes | fibroblasts | FMA:63877 |
| T3 | 1329-1340 | Body_part | denotes | fibroblasts | FMA:63877 |
NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 139-144 | OrganismTaxon | denotes | human | 9606 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 36-46 | Body_part | denotes | fibroblast | http://purl.obolibrary.org/obo/CL_0000057 |
| T2 | 154-165 | Body_part | denotes | fibroblasts | http://purl.obolibrary.org/obo/CL_0000057 |
| T3 | 1329-1340 | Body_part | denotes | fibroblasts | http://purl.obolibrary.org/obo/CL_0000057 |
CL-cell
| Id | Subject | Object | Predicate | Lexical cue | cl_id |
|---|---|---|---|---|---|
| T1 | 36-46 | Cell | denotes | fibroblast | http://purl.obolibrary.org/obo/CL:0000057 |
| T2 | 154-165 | Cell | denotes | fibroblasts | http://purl.obolibrary.org/obo/CL:0000057 |
| T3 | 1329-1340 | Cell | denotes | fibroblasts | http://purl.obolibrary.org/obo/CL:0000057 |