PubMed:3928622
Annnotations
GlyCosmos6-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T1 | 138-144 | Body_part | denotes | plasma | http://purl.obolibrary.org/obo/UBERON_0001969 |
T2 | 194-199 | Body_part | denotes | fluid | http://purl.obolibrary.org/obo/UBERON_0006314 |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 0-94 | Sentence | denotes | Interaction of gelatin with a fluorescein-labeled 42-kDa chymotryptic fragment of fibronectin. |
T2 | 95-248 | Sentence | denotes | A 42-kDa gelatin binding fragment of human plasma fibronectin was labeled with fluorescein and its fluid-phase interaction with gelatin was investigated. |
T3 | 249-430 | Sentence | denotes | At 25 degrees C in 0.1 M Tris, 0.15 M NaCl, pH 7.3, a dissociation constant, Kd = 0.6 microM, was obtained from the dependence of fluorescence polarization on gelatin concentration. |
T4 | 431-505 | Sentence | denotes | An identical value was obtained for the unlabeled fragment by competition. |
T5 | 506-630 | Sentence | denotes | Binding was unaffected by higher concentrations of NaCl up to 1.0 M, but increased as much as 20-fold at low ionic strength. |
T6 | 631-750 | Sentence | denotes | The dependence of Kd on temperature revealed that dissociation of the complex is accompanied by an increase in entropy. |
T7 | 751-888 | Sentence | denotes | Thus, the interaction is not dominated by either hydrophobic or electrostatic forces; an important role for hydrogen binding is proposed. |
T1 | 0-94 | Sentence | denotes | Interaction of gelatin with a fluorescein-labeled 42-kDa chymotryptic fragment of fibronectin. |
T2 | 95-248 | Sentence | denotes | A 42-kDa gelatin binding fragment of human plasma fibronectin was labeled with fluorescein and its fluid-phase interaction with gelatin was investigated. |
T3 | 249-430 | Sentence | denotes | At 25 degrees C in 0.1 M Tris, 0.15 M NaCl, pH 7.3, a dissociation constant, Kd = 0.6 microM, was obtained from the dependence of fluorescence polarization on gelatin concentration. |
T4 | 431-505 | Sentence | denotes | An identical value was obtained for the unlabeled fragment by competition. |
T5 | 506-630 | Sentence | denotes | Binding was unaffected by higher concentrations of NaCl up to 1.0 M, but increased as much as 20-fold at low ionic strength. |
T6 | 631-750 | Sentence | denotes | The dependence of Kd on temperature revealed that dissociation of the complex is accompanied by an increase in entropy. |
T7 | 751-888 | Sentence | denotes | Thus, the interaction is not dominated by either hydrophobic or electrostatic forces; an important role for hydrogen binding is proposed. |
GlyCosmos6-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 42-49 | http://purl.obolibrary.org/obo/CLO_0007225 | denotes | labeled |
T2 | 161-168 | http://purl.obolibrary.org/obo/CLO_0007225 | denotes | labeled |
NCBITAXON
Id | Subject | Object | Predicate | Lexical cue | db_id |
---|---|---|---|---|---|
T1 | 132-137 | OrganismTaxon | denotes | human | NCBItxid:9606 |
spacy-test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
spaCy_T0 | 0-11 | NNP | denotes | Interaction |
spaCy_T1 | 12-14 | IN | denotes | of |
spaCy_T2 | 15-22 | NN | denotes | gelatin |
spaCy_T3 | 23-27 | IN | denotes | with |
spaCy_T4 | 28-29 | DT | denotes | a |
spaCy_T5 | 30-49 | JJ | denotes | fluorescein-labeled |
spaCy_T6 | 50-56 | NN | denotes | 42-kDa |
spaCy_T7 | 57-69 | JJ | denotes | chymotryptic |
spaCy_T8 | 70-78 | NN | denotes | fragment |
spaCy_T9 | 79-81 | IN | denotes | of |
spaCy_T10 | 82-93 | NN | denotes | fibronectin |
spaCy_T11 | 93-94 | . | denotes | . |
spaCy_T12 | 95-96 | DT | denotes | A |
spaCy_T13 | 97-103 | JJ | denotes | 42-kDa |
spaCy_T14 | 104-111 | NN | denotes | gelatin |
spaCy_T15 | 112-119 | JJ | denotes | binding |
spaCy_T16 | 120-128 | NN | denotes | fragment |
spaCy_T17 | 129-131 | IN | denotes | of |
spaCy_T18 | 132-137 | JJ | denotes | human |
spaCy_T19 | 138-144 | NN | denotes | plasma |
spaCy_T20 | 145-156 | NN | denotes | fibronectin |
spaCy_T21 | 157-160 | VBD | denotes | was |
spaCy_T22 | 161-168 | VBN | denotes | labeled |
spaCy_T23 | 169-173 | IN | denotes | with |
spaCy_T24 | 174-185 | NN | denotes | fluorescein |
spaCy_T25 | 186-189 | CC | denotes | and |
spaCy_T26 | 190-193 | PRP$ | denotes | its |
spaCy_T27 | 194-205 | JJ | denotes | fluid-phase |
spaCy_T28 | 206-217 | NN | denotes | interaction |
spaCy_T29 | 218-222 | IN | denotes | with |
spaCy_T30 | 223-230 | NN | denotes | gelatin |
spaCy_T31 | 231-234 | VBD | denotes | was |
spaCy_T32 | 235-247 | VBN | denotes | investigated |
spaCy_T33 | 247-248 | . | denotes | . |
spaCy_T34 | 249-251 | IN | denotes | At |
spaCy_T35 | 252-254 | CD | denotes | 25 |
spaCy_T36 | 255-262 | NNS | denotes | degrees |
spaCy_T37 | 263-264 | $ | denotes | C |
spaCy_T38 | 265-267 | IN | denotes | in |
spaCy_T39 | 268-271 | CD | denotes | 0.1 |
spaCy_T40 | 272-273 | NNP | denotes | M |
spaCy_T41 | 274-278 | NNP | denotes | Tris |
spaCy_T42 | 278-279 | , | denotes | , |
spaCy_T43 | 280-284 | CD | denotes | 0.15 |
spaCy_T44 | 285-286 | NNP | denotes | M |
spaCy_T45 | 287-291 | NNP | denotes | NaCl |
spaCy_T46 | 291-292 | , | denotes | , |
spaCy_T47 | 293-295 | NNP | denotes | pH |
spaCy_T48 | 296-299 | CD | denotes | 7.3 |
spaCy_T49 | 299-300 | , | denotes | , |
spaCy_T50 | 301-302 | DT | denotes | a |
spaCy_T51 | 303-315 | NN | denotes | dissociation |
spaCy_T112 | 655-666 | NN | denotes | temperature |
spaCy_T113 | 667-675 | VBD | denotes | revealed |
spaCy_T52 | 316-324 | JJ | denotes | constant |
spaCy_T53 | 324-325 | , | denotes | , |
spaCy_T54 | 326-328 | NNP | denotes | Kd |
spaCy_T55 | 329-330 | SYM | denotes | = |
spaCy_T56 | 331-334 | CD | denotes | 0.6 |
spaCy_T57 | 335-341 | NNP | denotes | microM |
spaCy_T58 | 341-342 | , | denotes | , |
spaCy_T59 | 343-346 | VBD | denotes | was |
spaCy_T60 | 347-355 | VBN | denotes | obtained |
spaCy_T61 | 356-360 | IN | denotes | from |
spaCy_T62 | 361-364 | DT | denotes | the |
spaCy_T63 | 365-375 | NN | denotes | dependence |
spaCy_T64 | 376-378 | IN | denotes | of |
spaCy_T65 | 379-391 | NN | denotes | fluorescence |
spaCy_T66 | 392-404 | NN | denotes | polarization |
spaCy_T67 | 405-407 | IN | denotes | on |
spaCy_T68 | 408-415 | NN | denotes | gelatin |
spaCy_T69 | 416-429 | NN | denotes | concentration |
spaCy_T70 | 429-430 | . | denotes | . |
spaCy_T71 | 431-433 | DT | denotes | An |
spaCy_T72 | 434-443 | JJ | denotes | identical |
spaCy_T73 | 444-449 | NN | denotes | value |
spaCy_T74 | 450-453 | VBD | denotes | was |
spaCy_T75 | 454-462 | VBN | denotes | obtained |
spaCy_T76 | 463-466 | IN | denotes | for |
spaCy_T77 | 467-470 | DT | denotes | the |
spaCy_T78 | 471-480 | JJ | denotes | unlabeled |
spaCy_T79 | 481-489 | NN | denotes | fragment |
spaCy_T80 | 490-492 | IN | denotes | by |
spaCy_T81 | 493-504 | NN | denotes | competition |
spaCy_T82 | 504-505 | . | denotes | . |
spaCy_T83 | 506-513 | VBG | denotes | Binding |
spaCy_T84 | 514-517 | VBD | denotes | was |
spaCy_T85 | 518-528 | JJ | denotes | unaffected |
spaCy_T86 | 529-531 | IN | denotes | by |
spaCy_T87 | 532-538 | JJR | denotes | higher |
spaCy_T88 | 539-553 | NNS | denotes | concentrations |
spaCy_T89 | 554-556 | IN | denotes | of |
spaCy_T90 | 557-561 | NNP | denotes | NaCl |
spaCy_T91 | 562-564 | IN | denotes | up |
spaCy_T92 | 565-567 | TO | denotes | to |
spaCy_T93 | 568-571 | CD | denotes | 1.0 |
spaCy_T94 | 572-573 | NNP | denotes | M |
spaCy_T95 | 573-574 | , | denotes | , |
spaCy_T96 | 575-578 | CC | denotes | but |
spaCy_T97 | 579-588 | VBD | denotes | increased |
spaCy_T98 | 589-591 | RB | denotes | as |
spaCy_T99 | 592-596 | JJ | denotes | much |
spaCy_T100 | 597-599 | IN | denotes | as |
spaCy_T101 | 600-607 | JJ | denotes | 20-fold |
spaCy_T102 | 608-610 | IN | denotes | at |
spaCy_T103 | 611-614 | JJ | denotes | low |
spaCy_T104 | 615-620 | JJ | denotes | ionic |
spaCy_T105 | 621-629 | NN | denotes | strength |
spaCy_T106 | 629-630 | . | denotes | . |
spaCy_T107 | 631-634 | DT | denotes | The |
spaCy_T108 | 635-645 | NN | denotes | dependence |
spaCy_T109 | 646-648 | IN | denotes | of |
spaCy_T110 | 649-651 | NNP | denotes | Kd |
spaCy_T111 | 652-654 | IN | denotes | on |
spaCy_T114 | 676-680 | IN | denotes | that |
spaCy_T115 | 681-693 | NN | denotes | dissociation |
spaCy_T116 | 694-696 | IN | denotes | of |
spaCy_T117 | 697-700 | DT | denotes | the |
spaCy_T118 | 701-708 | NN | denotes | complex |
spaCy_T119 | 709-711 | VBZ | denotes | is |
spaCy_T120 | 712-723 | VBN | denotes | accompanied |
spaCy_T121 | 724-726 | IN | denotes | by |
spaCy_T122 | 727-729 | DT | denotes | an |
spaCy_T123 | 730-738 | NN | denotes | increase |
spaCy_T124 | 739-741 | IN | denotes | in |
spaCy_T125 | 742-749 | JJ | denotes | entropy |
spaCy_T126 | 749-750 | . | denotes | . |
spaCy_T127 | 751-755 | RB | denotes | Thus |
spaCy_T128 | 755-756 | , | denotes | , |
spaCy_T129 | 757-760 | DT | denotes | the |
spaCy_T130 | 761-772 | NN | denotes | interaction |
spaCy_T131 | 773-775 | VBZ | denotes | is |
spaCy_T132 | 776-779 | RB | denotes | not |
spaCy_T133 | 780-789 | VBN | denotes | dominated |
spaCy_T134 | 790-792 | IN | denotes | by |
spaCy_T135 | 793-799 | DT | denotes | either |
spaCy_T136 | 800-811 | JJ | denotes | hydrophobic |
spaCy_T137 | 812-814 | CC | denotes | or |
spaCy_T138 | 815-828 | JJ | denotes | electrostatic |
spaCy_T139 | 829-835 | NNS | denotes | forces |
spaCy_T140 | 835-836 | : | denotes | ; |
spaCy_T141 | 837-839 | DT | denotes | an |
spaCy_T142 | 840-849 | JJ | denotes | important |
spaCy_T143 | 850-854 | NN | denotes | role |
spaCy_T144 | 855-858 | IN | denotes | for |
spaCy_T145 | 859-867 | NN | denotes | hydrogen |
spaCy_T146 | 868-875 | JJ | denotes | binding |
spaCy_T147 | 876-878 | VBZ | denotes | is |
spaCy_T148 | 879-887 | VBN | denotes | proposed |
spaCy_T149 | 887-888 | . | denotes | . |
spaCy_R18 | spaCy_T18 | spaCy_T19 | amod | human,plasma |
spaCy_R97 | spaCy_T97 | spaCy_T85 | conj | increased,unaffected |
spaCy_R2 | spaCy_T2 | spaCy_T1 | pobj | gelatin,of |
spaCy_R3 | spaCy_T3 | spaCy_T0 | prep | with,Interaction |
spaCy_R4 | spaCy_T4 | spaCy_T8 | det | a,fragment |
spaCy_R6 | spaCy_T6 | spaCy_T8 | nmod | 42-kDa,fragment |
spaCy_R7 | spaCy_T7 | spaCy_T8 | amod | chymotryptic,fragment |
spaCy_R8 | spaCy_T8 | spaCy_T3 | pobj | fragment,with |
spaCy_R9 | spaCy_T9 | spaCy_T8 | prep | of,fragment |
spaCy_R10 | spaCy_T10 | spaCy_T9 | pobj | fibronectin,of |
spaCy_R90 | spaCy_T90 | spaCy_T89 | pobj | NaCl,of |
spaCy_R0 | spaCy_T0 | spaCy_T0 | ROOT | Interaction,Interaction |
spaCy_R1 | spaCy_T1 | spaCy_T0 | prep | of,Interaction |
spaCy_R5 | spaCy_T5 | spaCy_T8 | amod | fluorescein-labeled,fragment |
spaCy_R11 | spaCy_T11 | spaCy_T0 | punct | .,Interaction |
spaCy_R12 | spaCy_T12 | spaCy_T16 | det | A,fragment |
spaCy_R13 | spaCy_T13 | spaCy_T16 | amod | 42-kDa,fragment |
spaCy_R14 | spaCy_T14 | spaCy_T16 | amod | gelatin,fragment |
spaCy_R15 | spaCy_T15 | spaCy_T16 | amod | binding,fragment |
spaCy_R16 | spaCy_T16 | spaCy_T22 | nsubjpass | fragment,labeled |
spaCy_R17 | spaCy_T17 | spaCy_T16 | prep | of,fragment |
spaCy_R19 | spaCy_T19 | spaCy_T20 | compound | plasma,fibronectin |
spaCy_R20 | spaCy_T20 | spaCy_T17 | pobj | fibronectin,of |
spaCy_R21 | spaCy_T21 | spaCy_T22 | auxpass | was,labeled |
spaCy_R22 | spaCy_T22 | spaCy_T22 | ROOT | labeled,labeled |
spaCy_R23 | spaCy_T23 | spaCy_T22 | prep | with,labeled |
spaCy_R24 | spaCy_T24 | spaCy_T23 | pobj | fluorescein,with |
spaCy_R25 | spaCy_T25 | spaCy_T24 | cc | and,fluorescein |
spaCy_R26 | spaCy_T26 | spaCy_T28 | poss | its,interaction |
spaCy_R27 | spaCy_T27 | spaCy_T28 | amod | fluid-phase,interaction |
spaCy_R28 | spaCy_T28 | spaCy_T32 | nsubjpass | interaction,investigated |
spaCy_R29 | spaCy_T29 | spaCy_T28 | prep | with,interaction |
spaCy_R30 | spaCy_T30 | spaCy_T29 | pobj | gelatin,with |
spaCy_R31 | spaCy_T31 | spaCy_T32 | auxpass | was,investigated |
spaCy_R32 | spaCy_T32 | spaCy_T22 | conj | investigated,labeled |
spaCy_R33 | spaCy_T33 | spaCy_T32 | punct | .,investigated |
spaCy_R34 | spaCy_T34 | spaCy_T60 | prep | At,obtained |
spaCy_R35 | spaCy_T35 | spaCy_T36 | nummod | 25,degrees |
spaCy_R36 | spaCy_T36 | spaCy_T34 | pobj | degrees,At |
spaCy_R37 | spaCy_T37 | spaCy_T60 | nsubjpass | C,obtained |
spaCy_R38 | spaCy_T38 | spaCy_T60 | prep | in,obtained |
spaCy_R39 | spaCy_T39 | spaCy_T41 | nummod | 0.1,Tris |
spaCy_R40 | spaCy_T40 | spaCy_T41 | compound | M,Tris |
spaCy_R41 | spaCy_T41 | spaCy_T38 | pobj | Tris,in |
spaCy_R42 | spaCy_T42 | spaCy_T60 | punct | ",",obtained |
spaCy_R43 | spaCy_T43 | spaCy_T45 | nummod | 0.15,NaCl |
spaCy_R44 | spaCy_T44 | spaCy_T45 | compound | M,NaCl |
spaCy_R45 | spaCy_T45 | spaCy_T60 | advcl | NaCl,obtained |
spaCy_R46 | spaCy_T46 | spaCy_T45 | punct | ",",NaCl |
spaCy_R47 | spaCy_T47 | spaCy_T60 | nsubjpass | pH,obtained |
spaCy_R48 | spaCy_T48 | spaCy_T47 | nummod | 7.3,pH |
spaCy_R49 | spaCy_T49 | spaCy_T47 | punct | ",",pH |
spaCy_R50 | spaCy_T50 | spaCy_T51 | det | a,dissociation |
spaCy_R51 | spaCy_T51 | spaCy_T52 | npadvmod | dissociation,constant |
spaCy_R52 | spaCy_T52 | spaCy_T57 | amod | constant,microM |
spaCy_R53 | spaCy_T53 | spaCy_T57 | punct | ",",microM |
spaCy_R54 | spaCy_T54 | spaCy_T57 | nmod | Kd,microM |
spaCy_R55 | spaCy_T55 | spaCy_T56 | punct | =,0.6 |
spaCy_R56 | spaCy_T56 | spaCy_T57 | nummod | 0.6,microM |
spaCy_R57 | spaCy_T57 | spaCy_T47 | appos | microM,pH |
spaCy_R58 | spaCy_T58 | spaCy_T60 | punct | ",",obtained |
spaCy_R59 | spaCy_T59 | spaCy_T60 | auxpass | was,obtained |
spaCy_R60 | spaCy_T60 | spaCy_T60 | ROOT | obtained,obtained |
spaCy_R61 | spaCy_T61 | spaCy_T60 | prep | from,obtained |
spaCy_R62 | spaCy_T62 | spaCy_T63 | det | the,dependence |
spaCy_R63 | spaCy_T63 | spaCy_T61 | pobj | dependence,from |
spaCy_R64 | spaCy_T64 | spaCy_T63 | prep | of,dependence |
spaCy_R65 | spaCy_T65 | spaCy_T66 | compound | fluorescence,polarization |
spaCy_R66 | spaCy_T66 | spaCy_T64 | pobj | polarization,of |
spaCy_R67 | spaCy_T67 | spaCy_T66 | prep | on,polarization |
spaCy_R68 | spaCy_T68 | spaCy_T69 | compound | gelatin,concentration |
spaCy_R69 | spaCy_T69 | spaCy_T67 | pobj | concentration,on |
spaCy_R70 | spaCy_T70 | spaCy_T60 | punct | .,obtained |
spaCy_R71 | spaCy_T71 | spaCy_T73 | det | An,value |
spaCy_R72 | spaCy_T72 | spaCy_T73 | amod | identical,value |
spaCy_R73 | spaCy_T73 | spaCy_T75 | nsubjpass | value,obtained |
spaCy_R74 | spaCy_T74 | spaCy_T75 | auxpass | was,obtained |
spaCy_R75 | spaCy_T75 | spaCy_T75 | ROOT | obtained,obtained |
spaCy_R76 | spaCy_T76 | spaCy_T75 | prep | for,obtained |
spaCy_R77 | spaCy_T77 | spaCy_T79 | det | the,fragment |
spaCy_R78 | spaCy_T78 | spaCy_T79 | amod | unlabeled,fragment |
spaCy_R79 | spaCy_T79 | spaCy_T76 | pobj | fragment,for |
spaCy_R80 | spaCy_T80 | spaCy_T79 | prep | by,fragment |
spaCy_R81 | spaCy_T81 | spaCy_T80 | pobj | competition,by |
spaCy_R82 | spaCy_T82 | spaCy_T75 | punct | .,obtained |
spaCy_R83 | spaCy_T83 | spaCy_T85 | nsubjpass | Binding,unaffected |
spaCy_R84 | spaCy_T84 | spaCy_T85 | auxpass | was,unaffected |
spaCy_R85 | spaCy_T85 | spaCy_T85 | ROOT | unaffected,unaffected |
spaCy_R86 | spaCy_T86 | spaCy_T85 | agent | by,unaffected |
spaCy_R87 | spaCy_T87 | spaCy_T88 | amod | higher,concentrations |
spaCy_R88 | spaCy_T88 | spaCy_T86 | pobj | concentrations,by |
spaCy_R89 | spaCy_T89 | spaCy_T88 | prep | of,concentrations |
spaCy_R91 | spaCy_T91 | spaCy_T93 | quantmod | up,1.0 |
spaCy_R92 | spaCy_T92 | spaCy_T93 | quantmod | to,1.0 |
spaCy_R93 | spaCy_T93 | spaCy_T94 | nummod | 1.0,M |
spaCy_R94 | spaCy_T94 | spaCy_T85 | npadvmod | M,unaffected |
spaCy_R95 | spaCy_T95 | spaCy_T85 | punct | ",",unaffected |
spaCy_R96 | spaCy_T96 | spaCy_T85 | cc | but,unaffected |
spaCy_R98 | spaCy_T98 | spaCy_T99 | advmod | as,much |
spaCy_R99 | spaCy_T99 | spaCy_T97 | advmod | much,increased |
spaCy_R100 | spaCy_T100 | spaCy_T99 | prep | as,much |
spaCy_R101 | spaCy_T101 | spaCy_T100 | amod | 20-fold,as |
spaCy_R102 | spaCy_T102 | spaCy_T97 | prep | at,increased |
spaCy_R103 | spaCy_T103 | spaCy_T105 | amod | low,strength |
spaCy_R104 | spaCy_T104 | spaCy_T105 | amod | ionic,strength |
spaCy_R105 | spaCy_T105 | spaCy_T102 | pobj | strength,at |
spaCy_R106 | spaCy_T106 | spaCy_T97 | punct | .,increased |
spaCy_R107 | spaCy_T107 | spaCy_T108 | det | The,dependence |
spaCy_R108 | spaCy_T108 | spaCy_T113 | nsubj | dependence,revealed |
spaCy_R109 | spaCy_T109 | spaCy_T108 | prep | of,dependence |
spaCy_R110 | spaCy_T110 | spaCy_T109 | pobj | Kd,of |
spaCy_R111 | spaCy_T111 | spaCy_T108 | prep | on,dependence |
spaCy_R112 | spaCy_T112 | spaCy_T111 | pobj | temperature,on |
spaCy_R113 | spaCy_T113 | spaCy_T113 | ROOT | revealed,revealed |
spaCy_R114 | spaCy_T114 | spaCy_T120 | mark | that,accompanied |
spaCy_R115 | spaCy_T115 | spaCy_T120 | nsubjpass | dissociation,accompanied |
spaCy_R116 | spaCy_T116 | spaCy_T115 | prep | of,dissociation |
spaCy_R117 | spaCy_T117 | spaCy_T118 | det | the,complex |
spaCy_R118 | spaCy_T118 | spaCy_T116 | pobj | complex,of |
spaCy_R119 | spaCy_T119 | spaCy_T120 | auxpass | is,accompanied |
spaCy_R120 | spaCy_T120 | spaCy_T113 | ccomp | accompanied,revealed |
spaCy_R121 | spaCy_T121 | spaCy_T120 | agent | by,accompanied |
spaCy_R122 | spaCy_T122 | spaCy_T123 | det | an,increase |
spaCy_R123 | spaCy_T123 | spaCy_T121 | pobj | increase,by |
spaCy_R124 | spaCy_T124 | spaCy_T123 | prep | in,increase |
spaCy_R125 | spaCy_T125 | spaCy_T124 | pobj | entropy,in |
spaCy_R126 | spaCy_T126 | spaCy_T113 | punct | .,revealed |
spaCy_R127 | spaCy_T127 | spaCy_T133 | advmod | Thus,dominated |
spaCy_R128 | spaCy_T128 | spaCy_T133 | punct | ",",dominated |
spaCy_R129 | spaCy_T129 | spaCy_T130 | det | the,interaction |
spaCy_R130 | spaCy_T130 | spaCy_T133 | nsubjpass | interaction,dominated |
spaCy_R131 | spaCy_T131 | spaCy_T133 | auxpass | is,dominated |
spaCy_R132 | spaCy_T132 | spaCy_T133 | neg | not,dominated |
spaCy_R133 | spaCy_T133 | spaCy_T133 | ROOT | dominated,dominated |
spaCy_R134 | spaCy_T134 | spaCy_T133 | agent | by,dominated |
spaCy_R135 | spaCy_T135 | spaCy_T136 | preconj | either,hydrophobic |
spaCy_R136 | spaCy_T136 | spaCy_T139 | amod | hydrophobic,forces |
spaCy_R137 | spaCy_T137 | spaCy_T136 | cc | or,hydrophobic |
spaCy_R138 | spaCy_T138 | spaCy_T136 | conj | electrostatic,hydrophobic |
spaCy_R139 | spaCy_T139 | spaCy_T134 | pobj | forces,by |
spaCy_R140 | spaCy_T140 | spaCy_T139 | punct | ;,forces |
spaCy_R141 | spaCy_T141 | spaCy_T143 | det | an,role |
spaCy_R142 | spaCy_T142 | spaCy_T143 | amod | important,role |
spaCy_R143 | spaCy_T143 | spaCy_T133 | dobj | role,dominated |
spaCy_R144 | spaCy_T144 | spaCy_T143 | prep | for,role |
spaCy_R145 | spaCy_T145 | spaCy_T146 | npadvmod | hydrogen,binding |
spaCy_R146 | spaCy_T146 | spaCy_T144 | pobj | binding,for |
spaCy_R147 | spaCy_T147 | spaCy_T148 | auxpass | is,proposed |
spaCy_R148 | spaCy_T148 | spaCy_T133 | conj | proposed,dominated |
spaCy_R149 | spaCy_T149 | spaCy_T133 | punct | .,dominated |
oger-json-test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 15-22 | D005780 | denotes | gelatin |
T2 | 15-22 | CHEBI:5291 | denotes | gelatin |
T3 | 30-41 | D019793 | denotes | fluorescein |
T4 | 30-41 | CHEBI:31624 | denotes | fluorescein |
T5 | 70-78 | SO:0000731 | denotes | fragment |
T6 | 82-93 | Q28377 | denotes | fibronectin |
T7 | 82-93 | P11722 | denotes | fibronectin |
T8 | 82-93 | CHEBI:5058 | denotes | fibronectin |
T9 | 82-93 | Q91400 | denotes | fibronectin |
T10 | 82-93 | P07589 | denotes | fibronectin |
T11 | 82-93 | P11276 | denotes | fibronectin |
T12 | 82-93 | P04937 | denotes | fibronectin |
T13 | 82-93 | PR:000007581 | denotes | fibronectin |
T14 | 82-93 | Q91289 | denotes | fibronectin |
T15 | 82-93 | Q28275 | denotes | fibronectin |
T16 | 82-93 | D005353 | denotes | fibronectin |
T17 | 82-93 | Q28749 | denotes | fibronectin |
T18 | 82-93 | P02751 | denotes | fibronectin |
T19 | 82-93 | Q91740 | denotes | fibronectin |
T20 | 104-111 | D005780 | denotes | gelatin |
T21 | 104-111 | CHEBI:5291 | denotes | gelatin |
T22 | 112-119 | SO:0001091 | denotes | binding |
T23 | 112-119 | GO:0005488 | denotes | binding |
T24 | 112-119 | SO:0100018 | denotes | binding |
T25 | 120-128 | SO:0000731 | denotes | fragment |
T26 | 132-137 | PR:Q9Y653 | denotes | human |
T27 | 132-137 | 9606 | denotes | human |
T28 | 132-137 | D006801 | denotes | human |
T29 | 145-156 | Q28377 | denotes | fibronectin |
T30 | 145-156 | P11722 | denotes | fibronectin |
T31 | 145-156 | CHEBI:5058 | denotes | fibronectin |
T32 | 145-156 | Q91400 | denotes | fibronectin |
T33 | 145-156 | P07589 | denotes | fibronectin |
T34 | 145-156 | P11276 | denotes | fibronectin |
T35 | 145-156 | P04937 | denotes | fibronectin |
T36 | 145-156 | PR:000007581 | denotes | fibronectin |
T37 | 145-156 | Q91289 | denotes | fibronectin |
T38 | 145-156 | Q28275 | denotes | fibronectin |
T39 | 145-156 | D005353 | denotes | fibronectin |
T40 | 145-156 | Q28749 | denotes | fibronectin |
T41 | 145-156 | P02751 | denotes | fibronectin |
T42 | 145-156 | Q91740 | denotes | fibronectin |
T43 | 174-185 | D019793 | denotes | fluorescein |
T44 | 174-185 | CHEBI:31624 | denotes | fluorescein |
T45 | 223-230 | D005780 | denotes | gelatin |
T46 | 223-230 | CHEBI:5291 | denotes | gelatin |
T47 | 274-278 | PR:000013180 | denotes | Tris |
T48 | 274-278 | PR:Q3UTQ7 | denotes | Tris |
T49 | 274-278 | CHEBI:9754 | denotes | Tris |
T50 | 287-291 | CHEBI:26710 | denotes | NaCl |
T51 | 303-315 | D004213 | denotes | dissociation |
T52 | 408-415 | D005780 | denotes | gelatin |
T53 | 408-415 | CHEBI:5291 | denotes | gelatin |
T54 | 481-489 | SO:0000731 | denotes | fragment |
T55 | 557-561 | CHEBI:26710 | denotes | NaCl |
T56 | 565-569 | Q8Y1D2 | denotes | to 1 |
T57 | 603-607 | PR:000022679 | denotes | fold |
T58 | 681-693 | D004213 | denotes | dissociation |
T59 | 701-708 | SO:0001784 | denotes | complex |
T60 | 850-854 | CHEBI:50906 | denotes | role |
T61 | 859-867 | CHEBI:29235 | denotes | hydrogen |
T62 | 859-867 | CHEBI:49637 | denotes | hydrogen |
T63 | 868-875 | SO:0001091 | denotes | binding |
T64 | 868-875 | GO:0005488 | denotes | binding |
T65 | 868-875 | SO:0100018 | denotes | binding |