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GlyCosmos15-Species

Id Subject Object Predicate Lexical cue db_id
3 14-31 Species denotes influenza A virus 11320
4 71-78 Species denotes chicken 9031
5 84-95 Species denotes tufted duck 219594
23 97-114 Species denotes Influenza A virus 11320
24 238-244 Species denotes humans 9606
28 629-636 Species denotes chicken 9031
29 641-652 Species denotes tufted duck 219594
37 1568-1572 Species denotes pigs 9823
38 1577-1583 Species denotes humans 9606

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 14-23 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T2 97-106 Disease denotes Influenza http://purl.obolibrary.org/obo/MONDO_0005812
T3 1017-1020 Disease denotes MS2 http://purl.obolibrary.org/obo/MONDO_0012956
T4 1037-1040 Disease denotes MS3 http://purl.obolibrary.org/obo/MONDO_0012957

GlyCosmos15-Glycan

Id Subject Object Predicate Lexical cue image
T1 1259-1265 Glycan denotes Neu5Ac https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR

Glycan-GlyCosmos

Id Subject Object Predicate Lexical cue image
T1 1259-1265 Glycan denotes Neu5Ac https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR

GlyCosmos15-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 14-23 Disease denotes influenza MONDO:0005812
T2 97-106 Disease denotes Influenza MONDO:0005812

GlyCosmos15-Sentences

Id Subject Object Predicate Lexical cue
T1 0-96 Sentence denotes Expression of influenza A virus glycan receptor candidates in mallard, chicken, and tufted duck.
T2 97-245 Sentence denotes Influenza A virus (IAV) pandemics result from interspecies transmission events within the avian reservoir and further into mammals including humans.
T3 246-459 Sentence denotes Receptor incompatibility due to differently expressed glycan structures between species has been suggested to limit zoonotic IAV transmission from the wild bird reservoir as well as between different bird species.
T4 460-725 Sentence denotes Using glycoproteomics, we have studied the repertoires of expressed glycan structures with focus on putative sialic acid-containing glycan receptors for IAV in mallard, chicken and tufted duck; three bird species with different roles in the zoonotic ecology of IAV.
T5 726-1042 Sentence denotes The methodology used pinpoints specific glycan structures to specific glycosylation sites of identified glycoproteins and was also used to successfully discriminate α2-3- from α2-6-linked terminal sialic acids by careful analysis of oxonium ions released from glycopeptides in tandem MS/MS (MS2), and MS/MS/MS (MS3).
T6 1043-1266 Sentence denotes Our analysis clearly demonstrated that all three bird species can produce complex N-glycans including α2-3-linked sialyl Lewis structures, as well as both N- and O- glycans terminated with both α2-3- and α2-6-linked Neu5Ac.
T7 1267-1404 Sentence denotes We also found the recently identified putative IAV receptor structures, Man-6P N-glycopeptides, in all tissues of the three bird species.
T8 1405-1584 Sentence denotes Furthermore, we found many similarities in the repertoires of expressed receptors both between the bird species investigated and to previously published data from pigs and humans.
T9 1585-1832 Sentence denotes Our findings of sialylated glycan structures, previously anticipated to be mammalian specific, in all three bird species may have major implications for our understanding of the role of receptor incompatibility in interspecies transmission of IAV.

GlyCosmos15-NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 14-31 OrganismTaxon denotes influenza A virus 11320
T2 91-95 OrganismTaxon denotes duck 8839
T3 97-114 OrganismTaxon denotes Influenza A virus 11320
T4 116-119 OrganismTaxon denotes IAV 11320
T5 187-192 OrganismTaxon denotes avian 8782
T6 371-374 OrganismTaxon denotes IAV 11320
T7 613-616 OrganismTaxon denotes IAV 11320
T8 648-652 OrganismTaxon denotes duck 8839
T9 721-724 OrganismTaxon denotes IAV 11320
T10 1314-1317 OrganismTaxon denotes IAV 11320
T11 1568-1572 OrganismTaxon denotes pigs 9823
T12 1660-1669 OrganismTaxon denotes mammalian 40674
T13 1828-1831 OrganismTaxon denotes IAV 11320

GlyCosmos15-FMA

Id Subject Object Predicate Lexical cue db_id
T1 1370-1377 Body_part denotes tissues FMA:9637

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T9 721-724 OrganismTaxon denotes IAV 11320
T10 1314-1317 OrganismTaxon denotes IAV 11320
T11 1568-1572 OrganismTaxon denotes pigs 9823
T12 1828-1831 OrganismTaxon denotes IAV 11320
T1 14-31 OrganismTaxon denotes influenza A virus 11320
T2 91-95 OrganismTaxon denotes duck 8839
T3 97-114 OrganismTaxon denotes Influenza A virus 11320
T4 116-119 OrganismTaxon denotes IAV 11320
T5 187-192 OrganismTaxon denotes avian 8782
T6 371-374 OrganismTaxon denotes IAV 11320
T7 613-616 OrganismTaxon denotes IAV 11320
T8 648-652 OrganismTaxon denotes duck 8839