PubMed:36933118
Annnotations
Glycosmos6-MAT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 36-46 | http://purl.obolibrary.org/obo/MAT_0000043 | denotes | intestinal |
| T2 | 339-349 | http://purl.obolibrary.org/obo/MAT_0000043 | denotes | intestinal |
| T3 | 551-561 | http://purl.obolibrary.org/obo/MAT_0000043 | denotes | intestinal |
| T4 | 816-826 | http://purl.obolibrary.org/obo/MAT_0000043 | denotes | intestinal |
GlyCosmos15-Glycan
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 738-741 | Glycan | denotes | GM4 | https://api.glycosmos.org/wurcs2image/latest/png/binary/G30207PZ |
| T2 | 746-749 | Glycan | denotes | GM3 | https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK |
Anatomy-MAT
| Id | Subject | Object | Predicate | Lexical cue | mat_id |
|---|---|---|---|---|---|
| T1 | 36-46 | Body_part | denotes | intestinal | http://purl.obolibrary.org/obo/MAT_0000043 |
| T2 | 339-349 | Body_part | denotes | intestinal | http://purl.obolibrary.org/obo/MAT_0000043 |
| T3 | 551-561 | Body_part | denotes | intestinal | http://purl.obolibrary.org/obo/MAT_0000043 |
| T4 | 816-826 | Body_part | denotes | intestinal | http://purl.obolibrary.org/obo/MAT_0000043 |
Glycosmos6-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 738-741 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | GM4 | http://www.glycoepitope.jp/epitopes/EP0055 |
GlyCosmos6-Glycan-Motif-Image
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 694-705 | Glycan_Motif | denotes | sialic acid | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY |
| T2 | 738-741 | Glycan_Motif | denotes | GM4 | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G30207PZ|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G77824XV |
| T4 | 746-749 | Glycan_Motif | denotes | GM3 | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G56516VH|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G91237TK |
GlyCosmos6-Glycan-Motif-Structure
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 694-705 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | sialic acid |
| T2 | 738-741 | https://glytoucan.org/Structures/Glycans/G30207PZ | denotes | GM4 |
| T3 | 738-741 | https://glytoucan.org/Structures/Glycans/G77824XV | denotes | GM4 |
| T4 | 746-749 | https://glytoucan.org/Structures/Glycans/G56516VH | denotes | GM3 |
| T5 | 746-749 | https://glytoucan.org/Structures/Glycans/G91237TK | denotes | GM3 |
Glycan-GlyCosmos
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 738-741 | Glycan | denotes | GM4 | https://api.glycosmos.org/wurcs2image/latest/png/binary/G30207PZ |
| T2 | 746-749 | Glycan | denotes | GM3 | https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK |
GlyCosmos-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 738-741 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | GM4 | http://www.glycoepitope.jp/epitopes/EP0055 |
GlyCosmos15-CL
| Id | Subject | Object | Predicate | Lexical cue | cl_id |
|---|---|---|---|---|---|
| T1 | 792-808 | Cell | denotes | epithelial cells | http://purl.obolibrary.org/obo/CL:0000066 |
GlyCosmos15-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 36-53 | Body_part | denotes | intestinal tracts | http://purl.obolibrary.org/obo/UBERON_0000160|http://purl.obolibrary.org/obo/UBERON_0004921 |
| T3 | 551-568 | Body_part | denotes | intestinal tracts | http://purl.obolibrary.org/obo/UBERON_0000160|http://purl.obolibrary.org/obo/UBERON_0004921 |
| T5 | 792-808 | Body_part | denotes | epithelial cells | http://purl.obolibrary.org/obo/CL_0000066 |
| T6 | 816-832 | Body_part | denotes | intestinal tract | http://purl.obolibrary.org/obo/UBERON_0000160|http://purl.obolibrary.org/obo/UBERON_0004921 |
GlyCosmos15-Taxon
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 0-6 | Organism | denotes | Vibrio | 662 |
| T2 | 31-35 | Organism | denotes | fish | 117565|117569|118072|7777|7878|7898 |
| T8 | 211-215 | Organism | denotes | fish | 117565|117569|118072|7777|7878|7898 |
| T14 | 251-259 | Organism | denotes | bacteria | 2|629395 |
| T16 | 372-376 | Organism | denotes | fish | 117565|117569|118072|7777|7878|7898 |
| T22 | 435-439 | Organism | denotes | fish | 117565|117569|118072|7777|7878|7898 |
| T28 | 836-840 | Organism | denotes | fish | 117565|117569|118072|7777|7878|7898 |
| T34 | 906-912 | Organism | denotes | Vibrio | 662 |
| T35 | 937-941 | Organism | denotes | fish | 117565|117569|118072|7777|7878|7898 |
GlyCosmos15-Sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-54 | Sentence | denotes | Vibrio-binding gangliosides in fish intestinal tracts. |
| T2 | 55-216 | Sentence | denotes | It has been clarified that pathogens bind to glycosphingolipid (GSL) receptors in mammals, but there have been very few reports on pathogen-binding GSLs in fish. |
| T3 | 217-307 | Sentence | denotes | Vibrios are facultative anaerobic bacteria ubiquitous in marine and brackish environments. |
| T4 | 308-517 | Sentence | denotes | They are members of the normal intestinal microflora of healthy fish, but some species can cause a disease called vibriosis in fish and shellfish when the hosts are physiologically or immunologically weakened. |
| T5 | 518-660 | Sentence | denotes | The adherence of vibrios to host intestinal tracts is a significant event not only for survival and growth but also in terms of pathogenicity. |
| T6 | 661-841 | Sentence | denotes | We show in this mini-review that sialic acid-containing GSLs (gangliosides), GM4 and GM3, are receptors to which vibrios adhere to epithelial cells in the intestinal tract of fish. |
| T7 | 842-942 | Sentence | denotes | We also describe the enzymes responsible for synthesizing these Vibrio-binding gangliosides in fish. |
GlyCosmos15-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 738-741 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | GM4 | http://www.glycoepitope.jp/epitopes/EP0055 |
GlyCosmos15-FMA
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 36-46 | Body_part | denotes | intestinal | FMA:7199 |
| T2 | 339-349 | Body_part | denotes | intestinal | FMA:7199 |
| T3 | 551-561 | Body_part | denotes | intestinal | FMA:7199 |
| T4 | 792-808 | Body_part | denotes | epithelial cells | FMA:66768 |
| T5 | 816-826 | Body_part | denotes | intestinal | FMA:7199 |
GlyCosmos15-MAT
| Id | Subject | Object | Predicate | Lexical cue | mat_id |
|---|---|---|---|---|---|
| T1 | 36-46 | Body_part | denotes | intestinal | http://purl.obolibrary.org/obo/MAT_0000043 |
| T2 | 339-349 | Body_part | denotes | intestinal | http://purl.obolibrary.org/obo/MAT_0000043 |
| T3 | 551-561 | Body_part | denotes | intestinal | http://purl.obolibrary.org/obo/MAT_0000043 |
| T4 | 816-826 | Body_part | denotes | intestinal | http://purl.obolibrary.org/obo/MAT_0000043 |
NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 0-6 | OrganismTaxon | denotes | Vibrio | 662 |
| T2 | 31-35 | OrganismTaxon | denotes | fish | 117565|117569|118072|7777|7878|7898 |
| T8 | 211-215 | OrganismTaxon | denotes | fish | 117565|117569|118072|7777|7878|7898 |
| T14 | 251-259 | OrganismTaxon | denotes | bacteria | 2|629395 |
| T16 | 372-376 | OrganismTaxon | denotes | fish | 117565|117569|118072|7777|7878|7898 |
| T22 | 435-439 | OrganismTaxon | denotes | fish | 117565|117569|118072|7777|7878|7898 |
| T28 | 836-840 | OrganismTaxon | denotes | fish | 117565|117569|118072|7777|7878|7898 |
| T34 | 906-912 | OrganismTaxon | denotes | Vibrio | 662 |
| T35 | 937-941 | OrganismTaxon | denotes | fish | 117565|117569|118072|7777|7878|7898 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 36-53 | Body_part | denotes | intestinal tracts | http://purl.obolibrary.org/obo/UBERON_0000160|http://purl.obolibrary.org/obo/UBERON_0004921 |
| T3 | 551-568 | Body_part | denotes | intestinal tracts | http://purl.obolibrary.org/obo/UBERON_0000160|http://purl.obolibrary.org/obo/UBERON_0004921 |
| T5 | 792-808 | Body_part | denotes | epithelial cells | http://purl.obolibrary.org/obo/CL_0000066 |
| T6 | 816-832 | Body_part | denotes | intestinal tract | http://purl.obolibrary.org/obo/UBERON_0000160|http://purl.obolibrary.org/obo/UBERON_0004921 |
CL-cell
| Id | Subject | Object | Predicate | Lexical cue | cl_id |
|---|---|---|---|---|---|
| T1 | 792-808 | Cell | denotes | epithelial cells | http://purl.obolibrary.org/obo/CL:0000066 |