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sentences

Id Subject Object Predicate Lexical cue
T1 0-39 Sentence denotes Biosynthesis of chick type VI collagen.
T2 40-43 Sentence denotes II.
T3 44-108 Sentence denotes Processing and secretion in fibroblasts and smooth muscle cells.
T4 109-224 Sentence denotes The biosynthesis of type VI collagen was studied in "matrix-free" chick embryo smooth muscle cells and fibroblasts.
T5 225-371 Sentence denotes Omission of ascorbate from the culture affected to a great extent the secretion in fibroblasts but had a very minor effect on smooth muscle cells.
T6 372-813 Sentence denotes Quantitative analysis of the secretion process in continuous time course and in pulse-chase experiments confirmed that fibroblasts and smooth muscle cells secreted type VI collagen with the same chain composition but with different kinetics: after 4 h of chase more than 60% of the labeled type VI collagen was present in the culture medium of fibroblasts, whereas at the same time interval less than 25% was secreted by smooth muscle cells.
T7 814-928 Sentence denotes The different kinetics depends on intrinsic properties of the cells, since it was detected also in adherent cells.
T8 929-1109 Sentence denotes However, even in fibroblasts, secretion of type VI collagen was much slower than secretion of fibronectin, of which more than 50% was already in the cell medium after 1 h of chase.
T9 1110-1274 Sentence denotes Treatment of the cells with inhibitors of hydroxylation and glycosylation caused a shift in mobility that revealed a size heterogeneity in the Mr = 260,000 subunit.
T10 1275-1398 Sentence denotes No evidence of processing was observed in chick cells for any of the subunits that were synthesized and secreted uncleaved.
T11 1399-1613 Sentence denotes In addition, after several days of chase the Mr of the subunits of type VI collagen isolated from the matrix remained unchanged, thus excluding that in the chick even a partial or incomplete processing takes place.
T1 0-39 Sentence denotes Biosynthesis of chick type VI collagen.
T2 40-43 Sentence denotes II.
T3 44-108 Sentence denotes Processing and secretion in fibroblasts and smooth muscle cells.
T4 109-224 Sentence denotes The biosynthesis of type VI collagen was studied in "matrix-free" chick embryo smooth muscle cells and fibroblasts.
T5 225-371 Sentence denotes Omission of ascorbate from the culture affected to a great extent the secretion in fibroblasts but had a very minor effect on smooth muscle cells.
T6 372-813 Sentence denotes Quantitative analysis of the secretion process in continuous time course and in pulse-chase experiments confirmed that fibroblasts and smooth muscle cells secreted type VI collagen with the same chain composition but with different kinetics: after 4 h of chase more than 60% of the labeled type VI collagen was present in the culture medium of fibroblasts, whereas at the same time interval less than 25% was secreted by smooth muscle cells.
T7 814-928 Sentence denotes The different kinetics depends on intrinsic properties of the cells, since it was detected also in adherent cells.
T8 929-1109 Sentence denotes However, even in fibroblasts, secretion of type VI collagen was much slower than secretion of fibronectin, of which more than 50% was already in the cell medium after 1 h of chase.
T9 1110-1274 Sentence denotes Treatment of the cells with inhibitors of hydroxylation and glycosylation caused a shift in mobility that revealed a size heterogeneity in the Mr = 260,000 subunit.
T10 1275-1398 Sentence denotes No evidence of processing was observed in chick cells for any of the subunits that were synthesized and secreted uncleaved.
T11 1399-1613 Sentence denotes In addition, after several days of chase the Mr of the subunits of type VI collagen isolated from the matrix remained unchanged, thus excluding that in the chick even a partial or incomplete processing takes place.

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 88-101 http://purl.obolibrary.org/obo/MAT_0000303 denotes smooth muscle
T2 95-101 http://purl.obolibrary.org/obo/MAT_0000025 denotes muscle
T3 181-187 http://purl.obolibrary.org/obo/MAT_0000226 denotes embryo
T4 188-201 http://purl.obolibrary.org/obo/MAT_0000303 denotes smooth muscle
T5 195-201 http://purl.obolibrary.org/obo/MAT_0000025 denotes muscle
T6 351-364 http://purl.obolibrary.org/obo/MAT_0000303 denotes smooth muscle
T7 358-364 http://purl.obolibrary.org/obo/MAT_0000025 denotes muscle
T8 507-520 http://purl.obolibrary.org/obo/MAT_0000303 denotes smooth muscle
T9 514-520 http://purl.obolibrary.org/obo/MAT_0000025 denotes muscle
T10 793-806 http://purl.obolibrary.org/obo/MAT_0000303 denotes smooth muscle
T11 800-806 http://purl.obolibrary.org/obo/MAT_0000025 denotes muscle

bionlp-st-epi-2011-training

Id Subject Object Predicate Lexical cue
T1 1023-1034 Protein denotes fibronectin

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 72-83 Body_part denotes fibroblasts http://purl.obolibrary.org/obo/CL_0000057
T2 88-107 Body_part denotes smooth muscle cells http://purl.obolibrary.org/obo/CL_0000192
T3 181-187 Body_part denotes embryo http://purl.obolibrary.org/obo/UBERON_0000922
T4 188-207 Body_part denotes smooth muscle cells http://purl.obolibrary.org/obo/CL_0000192
T5 212-223 Body_part denotes fibroblasts http://purl.obolibrary.org/obo/CL_0000057
T6 308-319 Body_part denotes fibroblasts http://purl.obolibrary.org/obo/CL_0000057
T7 351-370 Body_part denotes smooth muscle cells http://purl.obolibrary.org/obo/CL_0000192
T8 491-502 Body_part denotes fibroblasts http://purl.obolibrary.org/obo/CL_0000057
T9 507-526 Body_part denotes smooth muscle cells http://purl.obolibrary.org/obo/CL_0000192
T10 716-727 Body_part denotes fibroblasts http://purl.obolibrary.org/obo/CL_0000057
T11 793-812 Body_part denotes smooth muscle cells http://purl.obolibrary.org/obo/CL_0000192
T12 946-957 Body_part denotes fibroblasts http://purl.obolibrary.org/obo/CL_0000057

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 88-101 Body_part denotes smooth muscle http://purl.obolibrary.org/obo/MAT_0000303
T2 181-187 Body_part denotes embryo http://purl.obolibrary.org/obo/MAT_0000226
T3 188-201 Body_part denotes smooth muscle http://purl.obolibrary.org/obo/MAT_0000303
T4 351-364 Body_part denotes smooth muscle http://purl.obolibrary.org/obo/MAT_0000303
T5 507-520 Body_part denotes smooth muscle http://purl.obolibrary.org/obo/MAT_0000303
T6 793-806 Body_part denotes smooth muscle http://purl.obolibrary.org/obo/MAT_0000303

CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 72-83 Cell denotes fibroblasts http://purl.obolibrary.org/obo/CL:0000057
T2 88-107 Cell denotes smooth muscle cells http://purl.obolibrary.org/obo/CL:0000192
T3 188-207 Cell denotes smooth muscle cells http://purl.obolibrary.org/obo/CL:0000192
T4 212-223 Cell denotes fibroblasts http://purl.obolibrary.org/obo/CL:0000057
T5 308-319 Cell denotes fibroblasts http://purl.obolibrary.org/obo/CL:0000057
T6 351-370 Cell denotes smooth muscle cells http://purl.obolibrary.org/obo/CL:0000192
T7 491-502 Cell denotes fibroblasts http://purl.obolibrary.org/obo/CL:0000057
T8 507-526 Cell denotes smooth muscle cells http://purl.obolibrary.org/obo/CL:0000192
T9 716-727 Cell denotes fibroblasts http://purl.obolibrary.org/obo/CL:0000057
T10 793-812 Cell denotes smooth muscle cells http://purl.obolibrary.org/obo/CL:0000192
T11 946-957 Cell denotes fibroblasts http://purl.obolibrary.org/obo/CL:0000057