PubMed:35961080
Annnotations
Glycosmos6-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 270-286 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | lacto-N-tetraose | http://www.glycoepitope.jp/epitopes/EP0322 |
| T2 | 288-291 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | LNT | http://www.glycoepitope.jp/epitopes/EP0322 |
| T3 | 297-316 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | lacto-N-neotetraose | http://www.glycoepitope.jp/epitopes/EP0350 |
| T4 | 318-322 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | LNnT | http://www.glycoepitope.jp/epitopes/EP0350 |
| T5 | 572-575 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | LNT | http://www.glycoepitope.jp/epitopes/EP0322 |
| T6 | 581-585 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | LNnT | http://www.glycoepitope.jp/epitopes/EP0350 |
GlyCosmos6-Glycan-Motif-Structure
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 270-286 | https://glytoucan.org/Structures/Glycans/G45827GY | denotes | lacto-N-tetraose |
| T2 | 270-286 | https://glytoucan.org/Structures/Glycans/G48059CD | denotes | lacto-N-tetraose |
| T3 | 288-291 | https://glytoucan.org/Structures/Glycans/G45827GY | denotes | LNT |
| T4 | 297-316 | https://glytoucan.org/Structures/Glycans/G45827GY | denotes | lacto-N-neotetraose |
| T5 | 297-316 | https://glytoucan.org/Structures/Glycans/G48059CD | denotes | lacto-N-neotetraose |
| T6 | 318-322 | https://glytoucan.org/Structures/Glycans/G45827GY | denotes | LNnT |
| T7 | 572-575 | https://glytoucan.org/Structures/Glycans/G45827GY | denotes | LNT |
| T8 | 581-585 | https://glytoucan.org/Structures/Glycans/G45827GY | denotes | LNnT |
GlyCosmos6-Glycan-Motif-Image
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 270-286 | Glycan_Motif | denotes | lacto-N-tetraose | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G45827GY|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G48059CD |
| T3 | 288-291 | Glycan_Motif | denotes | LNT | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G45827GY |
| T4 | 297-316 | Glycan_Motif | denotes | lacto-N-neotetraose | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G45827GY|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G48059CD |
| T6 | 318-322 | Glycan_Motif | denotes | LNnT | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G45827GY |
| T7 | 572-575 | Glycan_Motif | denotes | LNT | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G45827GY |
| T8 | 581-585 | Glycan_Motif | denotes | LNnT | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G45827GY |
Glycan-GlyCosmos
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 211-218 | Glycan | denotes | lactose | https://api.glycosmos.org/wurcs2image/latest/png/binary/G15541SE |
| T2 | 270-286 | Glycan | denotes | lacto-N-tetraose | https://api.glycosmos.org/wurcs2image/latest/png/binary/G45827GY |
| T3 | 288-291 | Glycan | denotes | LNT | https://api.glycosmos.org/wurcs2image/latest/png/binary/G45827GY |
| T4 | 297-316 | Glycan | denotes | lacto-N-neotetraose | https://api.glycosmos.org/wurcs2image/latest/png/binary/G48059CD |
| T5 | 318-322 | Glycan | denotes | LNnT | https://api.glycosmos.org/wurcs2image/latest/png/binary/G48059CD |
| T6 | 572-575 | Glycan | denotes | LNT | https://api.glycosmos.org/wurcs2image/latest/png/binary/G45827GY |
| T7 | 581-585 | Glycan | denotes | LNnT | https://api.glycosmos.org/wurcs2image/latest/png/binary/G48059CD |
GlyCosmos-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 270-286 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | lacto-N-tetraose | http://www.glycoepitope.jp/epitopes/EP0322 |
| T2 | 288-291 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | LNT | http://www.glycoepitope.jp/epitopes/EP0322 |
| T3 | 297-316 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | lacto-N-neotetraose | http://www.glycoepitope.jp/epitopes/EP0350 |
| T4 | 318-322 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | LNnT | http://www.glycoepitope.jp/epitopes/EP0350 |
| T5 | 572-575 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | LNT | http://www.glycoepitope.jp/epitopes/EP0322 |
| T6 | 581-585 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | LNnT | http://www.glycoepitope.jp/epitopes/EP0350 |
GlyCosmos15-Sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-56 | Sentence | denotes | Derivatization of sugars with N,O-dimethylhydroxylamine. |
| T2 | 57-104 | Sentence | denotes | Efficient RP-HPLC separation of sugar mixtures. |
| T3 | 105-192 | Sentence | denotes | Sugars were derivatized with N,O-dimethylhydroxylamine (DMHA) using a simple procedure. |
| T4 | 193-346 | Sentence | denotes | The disaccharides lactose and chitobiose and the human milk tetrasaccharides lacto-N-tetraose (LNT) and lacto-N-neotetraose (LNnT) were used as examples. |
| T5 | 347-416 | Sentence | denotes | The β-glycosylamines were formed exclusively in good yields (80-84%). |
| T6 | 417-567 | Sentence | denotes | The derivatives were very well suited for RP-HPLC, giving rise to single peaks for each sugar, without the usual complications caused by mutarotation. |
| T7 | 568-691 | Sentence | denotes | The LNT- and LNnT-derivatives separated very well on an ordinary RP-HPLC column, despite their close structural similarity. |
| T8 | 692-779 | Sentence | denotes | Also, three human milk pentasaccharides (LNF I, II and III) were derivatized with DMHA. |
| T9 | 780-833 | Sentence | denotes | Again, good separation of these isomers was obtained. |
| T10 | 834-878 | Sentence | denotes | The DMHA derivatization was easily reversed. |
| T11 | 879-961 | Sentence | denotes | The free oligosaccharides were recovered quantitatively by mild acidic hydrolysis. |
| T12 | 962-1144 | Sentence | denotes | To demonstrate usefulness on a preparative scale, an LNDI-rich human milk oligosaccharide fraction was derivatized, and three HPLC fractions (one major and two minor) were collected. |
| T13 | 1145-1257 | Sentence | denotes | Hydrolysis and desalting gave saccharides LNDI, LNnDII, and LNDII, the latter mixed with minor amounts of LNnDI. |
GlyCosmos15-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 270-286 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | lacto-N-tetraose | http://www.glycoepitope.jp/epitopes/EP0322 |
| T2 | 288-291 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | LNT | http://www.glycoepitope.jp/epitopes/EP0322 |
| T3 | 297-316 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | lacto-N-neotetraose | http://www.glycoepitope.jp/epitopes/EP0350 |
| T4 | 318-322 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | LNnT | http://www.glycoepitope.jp/epitopes/EP0350 |
| T5 | 572-575 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | LNT | http://www.glycoepitope.jp/epitopes/EP0322 |
| T6 | 581-585 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | LNnT | http://www.glycoepitope.jp/epitopes/EP0350 |
GlyCosmos15-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 248-252 | Body_part | denotes | milk | http://purl.obolibrary.org/obo/UBERON_0001913 |
| T2 | 710-714 | Body_part | denotes | milk | http://purl.obolibrary.org/obo/UBERON_0001913 |
| T3 | 1005-1010 | Body_part | denotes | scale | http://purl.obolibrary.org/obo/UBERON_0002542 |
| T4 | 1031-1035 | Body_part | denotes | milk | http://purl.obolibrary.org/obo/UBERON_0001913 |
GlyCosmos15-NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 242-247 | OrganismTaxon | denotes | human | 9606 |
| T2 | 704-709 | OrganismTaxon | denotes | human | 9606 |
| T3 | 1025-1030 | OrganismTaxon | denotes | human | 9606 |
GlyCosmos15-FMA
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 248-252 | Body_part | denotes | milk | FMA:62100 |
| T2 | 710-714 | Body_part | denotes | milk | FMA:62100 |
| T3 | 1031-1035 | Body_part | denotes | milk | FMA:62100 |
GlyCosmos15-Glycan
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 211-218 | Glycan | denotes | lactose | https://api.glycosmos.org/wurcs2image/latest/png/binary/G15541SE |
| T2 | 270-286 | Glycan | denotes | lacto-N-tetraose | https://api.glycosmos.org/wurcs2image/latest/png/binary/G45827GY |
| T3 | 288-291 | Glycan | denotes | LNT | https://api.glycosmos.org/wurcs2image/latest/png/binary/G45827GY |
| T4 | 297-316 | Glycan | denotes | lacto-N-neotetraose | https://api.glycosmos.org/wurcs2image/latest/png/binary/G48059CD |
| T5 | 318-322 | Glycan | denotes | LNnT | https://api.glycosmos.org/wurcs2image/latest/png/binary/G48059CD |
| T6 | 572-575 | Glycan | denotes | LNT | https://api.glycosmos.org/wurcs2image/latest/png/binary/G45827GY |
| T7 | 581-585 | Glycan | denotes | LNnT | https://api.glycosmos.org/wurcs2image/latest/png/binary/G48059CD |
NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 242-247 | OrganismTaxon | denotes | human | 9606 |
| T2 | 704-709 | OrganismTaxon | denotes | human | 9606 |
| T3 | 1025-1030 | OrganismTaxon | denotes | human | 9606 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 248-252 | Body_part | denotes | milk | http://purl.obolibrary.org/obo/UBERON_0001913 |
| T2 | 710-714 | Body_part | denotes | milk | http://purl.obolibrary.org/obo/UBERON_0001913 |
| T3 | 1005-1010 | Body_part | denotes | scale | http://purl.obolibrary.org/obo/UBERON_0002542 |
| T4 | 1031-1035 | Body_part | denotes | milk | http://purl.obolibrary.org/obo/UBERON_0001913 |