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PubMed:35121775 JSONTXT

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CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 875-877 Cell denotes I2 http://purl.obolibrary.org/obo/CL:0004120

GlyCosmos15-Glycan

Id Subject Object Predicate Lexical cue image
T1 1213-1220 Glycan denotes lactose https://api.glycosmos.org/wurcs2image/latest/png/binary/G15541SE

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 82-108 Disease denotes gastrointestinal disorders http://purl.obolibrary.org/obo/MONDO_0004335
T2 125-149 Disease denotes irritable bowel syndrome http://purl.obolibrary.org/obo/MONDO_0005052
T3 161-187 Disease denotes gastrointestinal disorders http://purl.obolibrary.org/obo/MONDO_0004335
T4 226-250 Disease denotes irritable bowel syndrome http://purl.obolibrary.org/obo/MONDO_0005052
T5 252-255 Disease denotes IBS http://purl.obolibrary.org/obo/MONDO_0005052|http://purl.obolibrary.org/obo/MONDO_0007813
T7 337-346 Disease denotes diarrhoea http://purl.obolibrary.org/obo/MONDO_0001673
T8 367-380 Disease denotes malabsorption http://purl.obolibrary.org/obo/MONDO_0020598
T9 387-406 Disease denotes microscopic colitis http://purl.obolibrary.org/obo/MONDO_0000702
T10 408-410 Disease denotes MC http://purl.obolibrary.org/obo/MONDO_0000702
T11 606-609 Disease denotes IBS http://purl.obolibrary.org/obo/MONDO_0005052|http://purl.obolibrary.org/obo/MONDO_0007813
T13 1017-1019 Disease denotes MC http://purl.obolibrary.org/obo/MONDO_0000702
T14 1225-1247 Disease denotes fructose malabsorption http://purl.obolibrary.org/obo/MONDO_0021759
T15 1590-1593 Disease denotes IBS http://purl.obolibrary.org/obo/MONDO_0005052|http://purl.obolibrary.org/obo/MONDO_0007813

HP-phenotype

Id Subject Object Predicate Lexical cue hp_id
T1 125-134 Phenotype denotes irritable HP:0000737
T2 226-235 Phenotype denotes irritable HP:0000737
T3 337-346 Phenotype denotes diarrhoea HP:0002014
T4 367-380 Phenotype denotes malabsorption HP:0002024
T5 399-406 Phenotype denotes colitis HP:0002583
T6 457-494 Phenotype denotes small intestinal bacterial overgrowth HP:0033163
T7 496-500 Phenotype denotes SIBO HP:0033163
T8 1225-1247 Phenotype denotes fructose malabsorption HP:0005973
T9 1362-1366 Phenotype denotes SIBO HP:0033163

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 457-473 Body_part denotes small intestinal http://purl.obolibrary.org/obo/MAT_0000047

Glycan-GlyCosmos

Id Subject Object Predicate Lexical cue image
T1 1213-1220 Glycan denotes lactose https://api.glycosmos.org/wurcs2image/latest/png/binary/G15541SE

GlyCosmos15-HP

Id Subject Object Predicate Lexical cue hp_id
T1 125-134 Phenotype denotes irritable HP:0000737
T2 226-235 Phenotype denotes irritable HP:0000737
T3 337-346 Phenotype denotes diarrhoea HP:0002014
T4 367-380 Phenotype denotes malabsorption HP:0002024
T5 399-406 Phenotype denotes colitis HP:0002583
T6 457-494 Phenotype denotes small intestinal bacterial overgrowth HP:0033163
T7 496-500 Phenotype denotes SIBO HP:0033163
T8 1225-1247 Phenotype denotes fructose malabsorption HP:0005973
T9 1362-1366 Phenotype denotes SIBO HP:0033163

GlyCosmos15-CL

Id Subject Object Predicate Lexical cue cl_id
T1 875-877 Cell denotes I2 http://purl.obolibrary.org/obo/CL:0004120

GlyCosmos15-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 135-140 Body_part denotes bowel http://purl.obolibrary.org/obo/UBERON_0000160
T2 236-241 Body_part denotes bowel http://purl.obolibrary.org/obo/UBERON_0000160
T3 327-331 Body_part denotes bile http://purl.obolibrary.org/obo/UBERON_0001970
T4 457-473 Body_part denotes small intestinal http://purl.obolibrary.org/obo/UBERON_0002108

GlyCosmos15-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 82-108 Disease denotes gastrointestinal disorders MONDO:0004335
T2 125-149 Disease denotes irritable bowel syndrome MONDO:0005052
T3 161-187 Disease denotes gastrointestinal disorders MONDO:0004335
T4 226-250 Disease denotes irritable bowel syndrome MONDO:0005052
T5 252-255 Disease denotes IBS MONDO:0005052
T6 337-346 Disease denotes diarrhoea MONDO:0001673
T7 367-380 Disease denotes malabsorption MONDO:0020598
T8 387-406 Disease denotes microscopic colitis MONDO:0000702
T9 408-410 Disease denotes MC MONDO:0000702
T10 457-494 Disease denotes small intestinal bacterial overgrowth MONDO:0400000
T11 496-500 Disease denotes SIBO MONDO:0400000
T12 606-609 Disease denotes IBS MONDO:0005052
T13 1017-1019 Disease denotes MC MONDO:0000702
T14 1225-1247 Disease denotes fructose malabsorption MONDO:0021759
T15 1362-1366 Disease denotes SIBO MONDO:0400000
T16 1590-1593 Disease denotes IBS MONDO:0005052

GlyCosmos15-Taxon

Id Subject Object Predicate Lexical cue db_id
T1 191-199 Organism denotes patients 9606
T2 565-573 Organism denotes patients 9606
T3 1547-1555 Organism denotes patients 9606
T4 1703-1711 Organism denotes patients 9606

GlyCosmos15-Sentences

Id Subject Object Predicate Lexical cue
T1 0-150 Sentence denotes A systematic review and meta-analysis on the prevalence of non-malignant, organic gastrointestinal disorders misdiagnosed as irritable bowel syndrome.
T2 151-275 Sentence denotes Treatable gastrointestinal disorders in patients with symptoms typical for irritable bowel syndrome (IBS) may be overlooked.
T3 276-610 Sentence denotes The prevalence of five gastrointestinal conditions-bile acid diarrhoea (BAD), carbohydrate malabsorption (CM), microscopic colitis (MC), pancreatic exocrine insufficiency (PEI) and small intestinal bacterial overgrowth (SIBO) was systematically assessed from studies including consecutive patients meeting diagnostic criteria for IBS.
T4 611-655 Sentence denotes 4 databases were searched from 1978 to 2020.
T5 656-763 Sentence denotes Studies were included if they evaluated the prevalence of these conditions in secondary healthcare setting.
T6 764-889 Sentence denotes Estimated pooled rates were calculated and statistical heterogeneity between studies was evaluated using Q and I2 statistics.
T7 890-976 Sentence denotes Seven studies (n = 597) estimated the pooled prevalence for BAD as 41% (95% CI 29-54).
T8 977-1040 Sentence denotes 17 studies (n = 5068) estimated that of MC as 3% (95% CI 2-4%).
T9 1041-1095 Sentence denotes Two studies (n = 478) suggested a rate of 4.6% (range:
T10 1096-1114 Sentence denotes 1.8-6.1%) for PEI.
T11 1115-1442 Sentence denotes Using breath testing, 26 studies (n = 6700) and 13 studies (n = 3415) estimated the prevalence of lactose and fructose malabsorption as 54% (95% CI 44-64%) and 43% (95% CI 23-62%); 36 studies (n = 4630) and 22 studies (n = 2149) estimated that of SIBO as 49% (95% CI 40-57%) with lactulose and 19% (95% CI 13-27%) with glucose.
T12 1443-1518 Sentence denotes Rates of all conditions were significantly higher than in healthy controls.
T13 1519-1657 Sentence denotes A significant proportion of patients presenting to secondary care with IBS have an organic condition which may account for their symptoms.
T14 1658-1732 Sentence denotes Failure to exclude such conditions will deny patients effective treatment.

GlyCosmos15-FMA

Id Subject Object Predicate Lexical cue db_id
T1 135-140 Body_part denotes bowel FMA:7199
T2 236-241 Body_part denotes bowel FMA:7199
T3 327-331 Body_part denotes bile FMA:62971
T4 457-473 Body_part denotes small intestinal FMA:7200

GlyCosmos15-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 457-473 Body_part denotes small intestinal http://purl.obolibrary.org/obo/MAT_0000047

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 135-140 Body_part denotes bowel http://purl.obolibrary.org/obo/UBERON_0000160
T2 236-241 Body_part denotes bowel http://purl.obolibrary.org/obo/UBERON_0000160
T3 327-331 Body_part denotes bile http://purl.obolibrary.org/obo/UBERON_0001970
T4 457-473 Body_part denotes small intestinal http://purl.obolibrary.org/obo/UBERON_0002108