PubMed:34133421 JSONTXT

{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/34133421","sourcedb":"PubMed","sourceid":"34133421","source_url":"https://www.ncbi.nlm.nih.gov/pubmed/34133421","text":"Ten simple rules for making a vocabulary FAIR.\nWe present ten simple rules that support converting a legacy vocabulary-a list of terms available in a print-based glossary or in a table not accessible using web standards-into a FAIR vocabulary. Various pathways may be followed to publish the FAIR vocabulary, but we emphasise particularly the goal of providing a globally unique resolvable identifier for each term or concept. A standard representation of the concept should be returned when the individual web identifier is resolved, using SKOS or OWL serialised in an RDF-based representation for machine-interchange and in a web-page for human consumption. Guidelines for vocabulary and term metadata are provided, as well as development and maintenance considerations. The rules are arranged as a stepwise recipe for creating a FAIR vocabulary based on the legacy vocabulary. By following these rules you can achieve the outcome of converting a legacy vocabulary into a standalone FAIR vocabulary, which can be used for unambiguous data annotation. In turn, this increases data interoperability and enables data integration.","tracks":[{"project":"JournalClub","denotations":[{"id":"T1","span":{"begin":549,"end":552},"obj":"Computational"},{"id":"T2","span":{"begin":541,"end":545},"obj":"Computational"},{"id":"T3","span":{"begin":41,"end":45},"obj":"Computational"},{"id":"T4","span":{"begin":227,"end":231},"obj":"Computational"},{"id":"T5","span":{"begin":292,"end":296},"obj":"Computational"},{"id":"T6","span":{"begin":832,"end":836},"obj":"Computational"},{"id":"T7","span":{"begin":985,"end":989},"obj":"Computational"},{"id":"T8","span":{"begin":570,"end":573},"obj":"Computational"},{"id":"T9","span":{"begin":390,"end":400},"obj":"Chemical"},{"id":"T10","span":{"begin":511,"end":521},"obj":"Chemical"}],"attributes":[{"subj":"T1","pred":"source","obj":"JournalClub"},{"subj":"T2","pred":"source","obj":"JournalClub"},{"subj":"T3","pred":"source","obj":"JournalClub"},{"subj":"T4","pred":"source","obj":"JournalClub"},{"subj":"T5","pred":"source","obj":"JournalClub"},{"subj":"T6","pred":"source","obj":"JournalClub"},{"subj":"T7","pred":"source","obj":"JournalClub"},{"subj":"T8","pred":"source","obj":"JournalClub"},{"subj":"T9","pred":"source","obj":"JournalClub"},{"subj":"T10","pred":"source","obj":"JournalClub"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"JournalClub","color":"#ec93d3","default":true}]}]}}