PubMed:33169089
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T1 | 1209-1213 | Body_part | denotes | face | http://purl.org/sig/ont/fma/fma24728 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 1209-1213 | Body_part | denotes | face | http://purl.obolibrary.org/obo/UBERON_0001456 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T1 | 52-59 | Phenotype | denotes | hypoxia | http://purl.obolibrary.org/obo/HP_0012418 |
| T2 | 94-101 | Phenotype | denotes | hypoxia | http://purl.obolibrary.org/obo/HP_0012418 |
| T3 | 215-222 | Phenotype | denotes | hypoxia | http://purl.obolibrary.org/obo/HP_0012418 |
| T4 | 254-274 | Phenotype | denotes | respiratory distress | http://purl.obolibrary.org/obo/HP_0002098 |
| T5 | 447-454 | Phenotype | denotes | hypoxia | http://purl.obolibrary.org/obo/HP_0012418 |
| T6 | 602-607 | Phenotype | denotes | cough | http://purl.obolibrary.org/obo/HP_0012735 |
| T7 | 609-614 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T8 | 677-697 | Phenotype | denotes | respiratory distress | http://purl.obolibrary.org/obo/HP_0002098 |
| T9 | 1020-1027 | Phenotype | denotes | hypoxia | http://purl.obolibrary.org/obo/HP_0012418 |
| T10 | 1301-1308 | Phenotype | denotes | hypoxia | http://purl.obolibrary.org/obo/HP_0012418 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 63-71 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T2 | 166-174 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T3 | 757-765 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T4 | 1506-1514 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 28-29 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T2 | 120-123 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T3 | 205-214 | http://purl.obolibrary.org/obo/BFO_0000030 | denotes | objective |
| T4 | 386-387 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T5 | 403-404 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T6 | 417-423 | http://purl.obolibrary.org/obo/UBERON_0003100 | denotes | female |
| T7 | 526-527 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T8 | 540-546 | http://purl.obolibrary.org/obo/UBERON_0003100 | denotes | female |
| T9 | 600-601 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T10 | 737-743 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tested |
| T11 | 1209-1213 | http://purl.obolibrary.org/obo/UBERON_0001456 | denotes | face |
| T12 | 1214-1215 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T13 | 1256-1257 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T14 | 1382-1383 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T15 | 1525-1526 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T16 | 1672-1673 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T17 | 1731-1732 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T3 | 1039-1045 | Chemical | denotes | oxygen | http://purl.obolibrary.org/obo/CHEBI_25805 |
| T4 | 1086-1092 | Chemical | denotes | oxygen | http://purl.obolibrary.org/obo/CHEBI_25805 |
| T1 | 622-628 | Chemical | denotes | oxygen | http://purl.obolibrary.org/obo/CHEBI_25805 |
| T2 | 820-826 | Chemical | denotes | oxygen | http://purl.obolibrary.org/obo/CHEBI_25805 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 2 | 52-59 | Disease | denotes | hypoxia | MESH:D000860 |
| 3 | 63-71 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 24 | 94-101 | Disease | denotes | hypoxia | MESH:D000860 |
| 25 | 142-150 | Species | denotes | patients | Tax:9606 |
| 26 | 166-174 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 27 | 215-222 | Disease | denotes | hypoxia | MESH:D000860 |
| 28 | 254-274 | Disease | denotes | respiratory distress | MESH:D012128 |
| 29 | 447-454 | Disease | denotes | hypoxia | MESH:D000860 |
| 30 | 602-607 | Disease | denotes | cough | MESH:D003371 |
| 31 | 609-614 | Disease | denotes | fever | MESH:D005334 |
| 32 | 622-628 | Chemical | denotes | oxygen | MESH:D010100 |
| 33 | 666-697 | Disease | denotes | absence of respiratory distress | MESH:D012128 |
| 34 | 757-765 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 35 | 820-826 | Chemical | denotes | oxygen | MESH:D010100 |
| 36 | 898-905 | Species | denotes | patient | Tax:9606 |
| 37 | 1013-1027 | Disease | denotes | silent hypoxia | MESH:D000860 |
| 38 | 1039-1045 | Chemical | denotes | oxygen | MESH:D010100 |
| 39 | 1086-1092 | Chemical | denotes | oxygen | MESH:D010100 |
| 40 | 1128-1135 | Species | denotes | patient | Tax:9606 |
| 41 | 1279-1286 | Species | denotes | patient | Tax:9606 |
| 42 | 1301-1308 | Disease | denotes | hypoxia | MESH:D000860 |
| 43 | 1506-1514 | Disease | denotes | COVID-19 | MESH:C000657245 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-27 | Sentence | denotes | Caution against precaution: |
| T2 | 28-72 | Sentence | denotes | A case report on silent hypoxia in COVID-19. |
| T3 | 73-86 | Sentence | denotes | Introduction: |
| T4 | 87-175 | Sentence | denotes | Silent hypoxia is an entity that has been described in patients diagnosed with COVID-19. |
| T5 | 176-275 | Sentence | denotes | It is typically described as objective hypoxia in the absence of proportional respiratory distress. |
| T6 | 276-374 | Sentence | denotes | The physiological basis for this phenomenon is controversial, and its prognostic value is unclear. |
| T7 | 375-503 | Sentence | denotes | We present a case below, of a 66-year-old female presenting with severe hypoxia that was managed without mechanical ventilation. |
| T8 | 504-525 | Sentence | denotes | Presentation of case: |
| T9 | 526-719 | Sentence | denotes | A 66 year old female with multiple comorbidities initially presented with a cough, fever and an oxygen saturation of 70% on room air in the absence of respiratory distress or altered mentation. |
| T10 | 720-893 | Sentence | denotes | She subsequently tested positive for COVID-19 and was admitted to the intensive care unit; received oxygen via high flow nasal cannula and continuous positive pressure mask. |
| T11 | 894-1046 | Sentence | denotes | The patient remained in the intensive care unit for 40 days under close observation and exhibited multiple episodes of silent hypoxia on weaning oxygen. |
| T12 | 1047-1123 | Sentence | denotes | She was discharged on room air with an oxygen saturation >90% after 56 days. |
| T13 | 1124-1170 | Sentence | denotes | The patient was not intubated during her stay. |
| T14 | 1171-1197 | Sentence | denotes | Discussion and conclusion: |
| T15 | 1198-1351 | Sentence | denotes | Clinicians face a clinical dilemma on whether to intubate a "silently hypoxemic" patient, who displays hypoxia out of proportion to clinical examination. |
| T16 | 1352-1524 | Sentence | denotes | The decision is confounded by a lack of clear evidence on whether the benefits of precautionary intubation outweighs the risks, especially in the current COVID-19 pandemic. |
| T17 | 1525-1649 | Sentence | denotes | A recent paradigm shift that recommends delaying intubation further displays the need for clearer analysis of the situation. |
| T18 | 1650-1799 | Sentence | denotes | Our case demonstrates a favorable outcome of the latter approach, yet emphasizes a case-by-case approach until clearer recommendations are available. |