> top > docs > PubMed:33163958 > annotations

PubMed:33163958 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 69-77 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T2 253-258 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T3 347-354 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T4 369-373 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T5 453-461 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 113-122 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T2 160-168 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T3 228-236 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T4 609-618 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T5 883-892 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T6 1140-1150 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 170-173 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T2 221-226 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T3 247-258 http://purl.obolibrary.org/obo/CLO_0053065 denotes human cells
T4 363-373 http://purl.obolibrary.org/obo/CLO_0053065 denotes human cell
T5 406-407 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T6 589-594 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T7 807-808 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T8 831-836 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T9 939-944 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T10 1069-1076 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 69-77 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T2 347-354 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T3 453-461 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
2 51-62 Species denotes coronavirus Tax:11118
3 113-122 Disease denotes infection MESH:D007239
14 133-158 Disease denotes novel coronavirus disease MESH:C000657245
15 160-168 Disease denotes COVID-19 MESH:C000657245
16 228-238 Species denotes SARS-CoV-2 Tax:2697049
17 247-252 Species denotes human Tax:9606
18 363-368 Species denotes human Tax:9606
19 383-387 Gene denotes ACE2 Gene:59272
20 435-446 Species denotes coronavirus Tax:11118
21 589-618 Disease denotes virus lethality and infection MESH:D001102
22 883-892 Disease denotes infection MESH:D007239
23 1140-1150 Disease denotes infections MESH:D007239

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-128 Sentence denotes Comparative analysis of nanomechanical features of coronavirus spike proteins and correlation with lethality and infection rate.
T2 129-206 Sentence denotes The novel coronavirus disease, COVID-19, has spread rapidly around the world.
T3 207-388 Sentence denotes Its causative virus, SARS-CoV-2, enters human cells through the physical interaction between the receptor-binding domain (RBD) of its spike protein and the human cell receptor ACE2.
T4 389-624 Sentence denotes Here, we provide a novel way in understanding coronavirus spike proteins, connecting their nanomechanical features - specifically its vibrational spectrum and quantitative measures of mobility - with virus lethality and infection rate.
T5 625-898 Sentence denotes The key result of our work is that both, the overall flexibility of upward RBD and the mobility ratio of RBDs in different conformations, represent two significant factors that show a positive scaling with virus lethality and an inverse correlation with the infection rate.
T6 899-1166 Sentence denotes Our analysis shows that epidemiological virus properties can be linked directly to pure nanomechanical, vibrational aspects, offering an alternative way of screening new viruses and mutations, and potentially exploring novel ways to prevent infections from occurring.