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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 1033-1039 Body_part denotes mental http://purl.org/sig/ont/fma/fma264279

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 23-31 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T2 191-199 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T3 320-328 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T4 341-351 Disease denotes infectious http://purl.obolibrary.org/obo/MONDO_0005550
T5 352-381 Disease denotes respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0009971
T6 383-387 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T7 421-429 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T8 590-598 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T9 1136-1144 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T10 1625-1633 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T11 1865-1873 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 188-190 http://www.ebi.ac.uk/efo/EFO_0000265 denotes da
T2 258-259 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T3 517-518 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T4 612-613 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T5 627-630 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T6 736-739 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T7 892-893 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T8 1077-1078 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T9 1382-1391 http://www.ebi.ac.uk/efo/EFO_0000876 denotes extremely

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1 23-31 Disease denotes COVID-19 MESH:C000657245
16 320-328 Disease denotes COVID-19 MESH:C000657245
17 341-381 Disease denotes infectious respiratory distress syndrome MESH:D012128
18 383-387 Disease denotes ARDS MESH:D012128
19 403-420 Species denotes novel coronavirus Tax:2697049
20 421-431 Species denotes SARS-CoV-2 Tax:2697049
21 567-573 Disease denotes deaths MESH:D003643
22 590-598 Disease denotes COVID-19 MESH:C000657245
23 680-686 Disease denotes deaths MESH:D003643
24 1136-1144 Disease denotes COVID-19 MESH:C000657245
25 1418-1427 Disease denotes mortality MESH:D003643
26 1538-1542 Disease denotes YLDs
27 1625-1633 Disease denotes COVID-19 MESH:C000657245
28 1764-1768 Disease denotes YLDs
29 1865-1873 Disease denotes COVID-19 MESH:C000657245

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-171 Sentence denotes Burden of disease from COVID-19 and its acute and chronic complications: reflections on measurement (DALYs) and prospects for the Brazilian Unified National Health System.
T2 172-319 Sentence denotes Carga de doença da COVID-19 e de suas complicações agudas e crônicas: reflexões sobre a mensuração (DALY) e perspectivas no Sistema Único de Saúde.
T3 320-432 Sentence denotes COVID-19 is an acute infectious respiratory distress syndrome (ARDS) caused by the novel coronavirus SARS-CoV-2.
T4 433-574 Sentence denotes The disease is highly communicable and produces mild to severe symptoms, generating a high demand for intensive care and thousands of deaths.
T5 575-700 Sentence denotes In March 2020, COVID-19 was declared a pandemic and has already surpassed five million cases and 300,000 deaths in the world.
T6 701-856 Sentence denotes The natural history of the disease has still not been fully established, hindering the elaboration of effective clinical protocols and preventive measures.
T7 857-1047 Sentence denotes Nevertheless, the disease requires a systemic approach, since there is evidence of acute and chronic complications, in addition to the catastrophic effects on the population's mental health.
T8 1048-1327 Sentence denotes This highlights the need for a methodology that more effectively captures the effect of COVID-19, considering such aspects as severity, duration, and the potential to generate chronic complications that will increase the demands on Brazilian Unified National Health System (SUS).
T9 1328-1544 Sentence denotes DALYs, or disability-adjusted life years, are thus an extremely useful indictor that adds mortality, an estimate of years of life lost (YLLs), and morbidity, an estimate of years of life lived with disability (YLDs).
T10 1545-1893 Sentence denotes This article discusses the relevance and difficulties of studying the burden of COVID-19 and its complications in the Brazilian context, highlighting the natural history of the disease and estimating indicators such as YLDs, considering the high burden of disease in planning strategies to deal with the consequences of COVID-19 after the pandemic.
T11 1894-2023 Sentence denotes The article also discusses the future challenges to deal with the disease in the SUS and the effects on the calculation of DALYs.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 352-372 Phenotype denotes respiratory distress http://purl.obolibrary.org/obo/HP_0002098

ENG_NER_NEL_CONSENSUS

Id Subject Object Predicate Lexical cue
T1 320-328 DOID:0080600 denotes COVID-19
T10 437-444 DOID:4 denotes disease
T11 437-444 MESH:D004194 denotes disease
T12 481-485 HP:0012825 denotes mild
T13 489-495 HP:0012828 denotes severe
T14 578-583 DOID:0080327 denotes March
T15 590-598 DOID:0080600 denotes COVID-19
T17 705-720 MESH:D019021 denotes natural history
T19 728-735 DOID:4 denotes disease
T20 728-735 MESH:D004194 denotes disease
T21 813-831 MESH:D002985 denotes clinical protocols
T22 875-882 DOID:4 denotes disease
T23 875-882 MESH:D004194 denotes disease
T24 940-945 HP:0011009 denotes acute
T25 950-957 HP:0011010 denotes chronic
T27 1136-1144 DOID:0080600 denotes COVID-19
T29 1224-1231 HP:0011010 denotes chronic
T3 335-340 HP:0011009 denotes acute
T39 1625-1633 DOID:0080600 denotes COVID-19
T4 352-372 HP:0002098 denotes respiratory distress
T41 1699-1714 MESH:D019021 denotes natural history
T43 1722-1729 DOID:4 denotes disease
T44 1722-1729 MESH:D004194 denotes disease
T45 1801-1808 DOID:4 denotes disease
T46 1801-1808 MESH:D004194 denotes disease
T47 1865-1873 DOID:0080600 denotes COVID-19
T49 1960-1967 DOID:4 denotes disease
T50 1960-1967 MESH:D004194 denotes disease
T51 1033-1046 MESH:D008603 denotes mental health
T52 320-328 HP:0033141 denotes COVID-19
T53 590-598 HP:0033141 denotes COVID-19
T54 1136-1144 HP:0033141 denotes COVID-19
T55 1625-1630 HP:0033141 denotes COVID
T57 1865-1873 HP:0033141 denotes COVID-19
T58 320-328 MESH:D000086382 denotes COVID-19
T59 590-598 MESH:D000086382 denotes COVID-19
T6 373-381 MESH:D013577 denotes syndrome
T60 1136-1144 MESH:D000086382 denotes COVID-19
T61 1625-1630 MESH:D000086382 denotes COVID
T62 1865-1873 MESH:D000086382 denotes COVID-19
T63 383-387 MESH:D045169 denotes ARDS
T64 341-381 MESH:D045169 denotes infectious respiratory distress syndrome
T7 383-387 DOID:11394 denotes ARDS
T9 409-432 MESH:D017934 denotes coronavirus SARS-CoV-2.
T65 1453-1457 MESH:D019369 denotes life
T66 1358-1362 MESH:D019369 denotes life
T67 1510-1514 MESH:D019369 denotes life

ENG_RE_CONSENSUS

Id Subject Object Predicate Lexical cue
T21 320-328 HP_0033141 denotes COVID-19
T0 320-328 DOID_0080600 denotes COVID-19
T1 335-340 HP_0011009 denotes acute
T2 352-372 HP_0002098 denotes respiratory distress
T4 383-387 DOID_11394 denotes ARDS
T5 437-444 DOID_4 denotes disease
T6 481-485 HP_0012825 denotes mild
T7 489-495 HP_0012828 denotes severe
T22 590-598 HP_0033141 denotes COVID-19
T8 590-598 DOID_0080600 denotes COVID-19
T9 728-735 DOID_4 denotes disease
T10 875-882 DOID_4 denotes disease
T11 940-945 HP_0011009 denotes acute
T12 950-957 HP_0011010 denotes chronic
T23 1136-1144 HP_0033141 denotes COVID-19
T13 1136-1144 DOID_0080600 denotes COVID-19
T14 1224-1231 HP_0011010 denotes chronic
T16 1625-1633 DOID_0080600 denotes COVID-19
T25 1630-1631 HP_0033141 denotes -
T24 1630-1631 HP_0033141 denotes -
T17 1722-1729 DOID_4 denotes disease
T18 1801-1808 DOID_4 denotes disease
T26 1865-1873 HP_0033141 denotes COVID-19
T19 1865-1873 DOID_0080600 denotes COVID-19
T20 1960-1967 DOID_4 denotes disease
R1 T1 T2 effect acute,respiratory distress
R2 T1 T4 effect acute,ARDS
R3 T22 T11 effect COVID-19,acute
R4 T22 T12 effect COVID-19,chronic
R5 T8 T11 effect COVID-19,acute