PubMed:33106671 / 730-1056
Annnotations
LitCovid-PD-MONDO
{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T6","span":{"begin":233,"end":241},"obj":"Disease"}],"attributes":[{"id":"A6","pred":"mondo_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"}],"text":"Sera from D614-infected hamsters exhibit modestly higher neutralization titers against G614 virus than against D614 virus, indicating that (i) the mutation may not reduce the ability of vaccines in clinical trials to protect against COVID-19 and (ii) therapeutic antibodies should be tested against the circulating G614 virus."}
LitCovid-PD-CLO
{"project":"LitCovid-PD-CLO","denotations":[{"id":"T8","span":{"begin":24,"end":32},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10026"},{"id":"T9","span":{"begin":92,"end":97},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T10","span":{"begin":116,"end":121},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T11","span":{"begin":284,"end":290},"obj":"http://purl.obolibrary.org/obo/UBERON_0000473"},{"id":"T12","span":{"begin":320,"end":325},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"}],"text":"Sera from D614-infected hamsters exhibit modestly higher neutralization titers against G614 virus than against D614 virus, indicating that (i) the mutation may not reduce the ability of vaccines in clinical trials to protect against COVID-19 and (ii) therapeutic antibodies should be tested against the circulating G614 virus."}
LitCovid-PubTator
{"project":"LitCovid-PubTator","denotations":[{"id":"34","span":{"begin":15,"end":23},"obj":"Disease"},{"id":"35","span":{"begin":233,"end":241},"obj":"Disease"}],"attributes":[{"id":"A34","pred":"tao:has_database_id","subj":"34","obj":"MESH:D007239"},{"id":"A35","pred":"tao:has_database_id","subj":"35","obj":"MESH:C000657245"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Sera from D614-infected hamsters exhibit modestly higher neutralization titers against G614 virus than against D614 virus, indicating that (i) the mutation may not reduce the ability of vaccines in clinical trials to protect against COVID-19 and (ii) therapeutic antibodies should be tested against the circulating G614 virus."}
LitCovid-sentences
{"project":"LitCovid-sentences","denotations":[{"id":"T7","span":{"begin":0,"end":326},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Sera from D614-infected hamsters exhibit modestly higher neutralization titers against G614 virus than against D614 virus, indicating that (i) the mutation may not reduce the ability of vaccines in clinical trials to protect against COVID-19 and (ii) therapeutic antibodies should be tested against the circulating G614 virus."}
Covid19_manual_annotation_v2
{"project":"Covid19_manual_annotation_v2","denotations":[{"id":"34","span":{"begin":15,"end":23},"obj":"Disease"},{"id":"35","span":{"begin":233,"end":241},"obj":"Disease"},{"id":"T11","span":{"begin":315,"end":319},"obj":"Variation"},{"id":"T12","span":{"begin":111,"end":115},"obj":"Variation"},{"id":"T13","span":{"begin":10,"end":14},"obj":"Variation"},{"id":"T34","span":{"begin":24,"end":32},"obj":"Species"},{"id":"T38","span":{"begin":186,"end":194},"obj":"Chemical"},{"id":"T41","span":{"begin":147,"end":155},"obj":"Variation"},{"id":"T42","span":{"begin":160,"end":163},"obj":"NegativeRegulation"},{"id":"T43","span":{"begin":164,"end":170},"obj":"NegativeRegulation"},{"id":"T44","span":{"begin":50,"end":56},"obj":"High"},{"id":"T45","span":{"begin":57,"end":78},"obj":"Index"},{"id":"T46","span":{"begin":92,"end":97},"obj":"Species"},{"id":"T47","span":{"begin":116,"end":121},"obj":"Species"},{"id":"T48","span":{"begin":0,"end":4},"obj":"Anatomy"},{"id":"T9","span":{"begin":87,"end":91},"obj":"Variation"}],"relations":[{"id":"R37","pred":"is_a","subj":"T42","obj":"T43"},{"id":"R40","pred":"against","subj":"35","obj":"T38"},{"id":"R43","pred":"is_a","subj":"T43","obj":"T38"},{"id":"R44","pred":"has_a","subj":"34","obj":"T34"},{"id":"R46","pred":"of_a","subj":"T44","obj":"T45"},{"id":"R53","pred":"of_a","subj":"T46","obj":"T45"},{"id":"R54","pred":"against","subj":"T47","obj":"T45"},{"id":"R55","pred":"of_a","subj":"T34","obj":"T48"},{"id":"R76","pred":"has_a","subj":"T34","obj":"T45"}],"attributes":[{"id":"A84","pred":"tao:has_database_id","subj":"T47","obj":"Tax:2697049"},{"id":"A34","pred":"tao:has_database_id","subj":"34","obj":"MESH:D007239"},{"id":"A35","pred":"tao:has_database_id","subj":"35","obj":"MESH:C000657245"},{"id":"A60","pred":"tao:has_standard_notation","subj":"T9","obj":"p.G614"},{"id":"A64","pred":"Memo","subj":"T45","obj":"MESH:D009500"},{"id":"A48","pred":"tao:has_standard_notation","subj":"T41","obj":"p.D614G"},{"id":"A77","pred":"Memo","subj":"T41","obj":"MESH:D009154"},{"id":"A83","pred":"tao:has_database_id","subj":"T46","obj":"BioSample:SAMN14384141"},{"id":"A61","pred":"tao:has_standard_notation","subj":"T11","obj":"p.G614"},{"id":"A62","pred":"tao:has_standard_notation","subj":"T12","obj":"p.D614"},{"id":"A46","pred":"ForCovid19","subj":"T38","obj":"drug"},{"id":"A55","pred":"tao:has_database_id","subj":"T38","obj":"MESH:D014612"},{"id":"A63","pred":"tao:has_standard_notation","subj":"T13","obj":"p.D614"},{"id":"A65","pred":"tao:has_database_id","subj":"T48","obj":"MESH:D044967"},{"id":"A41","pred":"tao:has_database_id","subj":"T34","obj":"Tax:10035"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"BioProject","uri":"https://www.ncbi.nlm.nih.gov/bioproject/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"},{"prefix":"HP","uri":"https://hpo.jax.org/app/browse/term/HP:"},{"prefix":"BioSample","uri":"https://www.ncbi.nlm.nih.gov/biosample/"}],"text":"Sera from D614-infected hamsters exhibit modestly higher neutralization titers against G614 virus than against D614 virus, indicating that (i) the mutation may not reduce the ability of vaccines in clinical trials to protect against COVID-19 and (ii) therapeutic antibodies should be tested against the circulating G614 virus."}
MyTest
{"project":"MyTest","denotations":[{"id":"34","span":{"begin":15,"end":23},"obj":"Disease"},{"id":"35","span":{"begin":233,"end":241},"obj":"Disease"},{"id":"T11","span":{"begin":315,"end":319},"obj":"Variation"},{"id":"T12","span":{"begin":111,"end":115},"obj":"Variation"},{"id":"T13","span":{"begin":10,"end":14},"obj":"Variation"},{"id":"T34","span":{"begin":24,"end":32},"obj":"Species"},{"id":"T38","span":{"begin":186,"end":194},"obj":"Chemical"},{"id":"T41","span":{"begin":147,"end":155},"obj":"Variation"},{"id":"T42","span":{"begin":160,"end":163},"obj":"NegativeRegulation"},{"id":"T43","span":{"begin":164,"end":170},"obj":"NegativeRegulation"},{"id":"T44","span":{"begin":50,"end":56},"obj":"High"},{"id":"T45","span":{"begin":57,"end":78},"obj":"Index"},{"id":"T46","span":{"begin":92,"end":97},"obj":"Species"},{"id":"T47","span":{"begin":116,"end":121},"obj":"Species"},{"id":"T48","span":{"begin":0,"end":4},"obj":"Anatomy"},{"id":"T9","span":{"begin":87,"end":91},"obj":"Variation"}],"relations":[{"id":"R37","pred":"is_a","subj":"T42","obj":"T43"},{"id":"R40","pred":"against","subj":"35","obj":"T38"},{"id":"R43","pred":"is_a","subj":"T43","obj":"T38"},{"id":"R46","pred":"of_a","subj":"T44","obj":"T45"},{"id":"R53","pred":"of_a","subj":"T46","obj":"T45"},{"id":"R55","pred":"of_a","subj":"T34","obj":"T48"},{"id":"R44","pred":"has_a","subj":"34","obj":"T34"},{"id":"R54","pred":"against","subj":"T47","obj":"T45"},{"id":"R76","pred":"has_a","subj":"T34","obj":"T45"}],"attributes":[{"id":"A55","pred":"tao:has_database_id","subj":"T38","obj":"MESH:D014612"},{"id":"A65","pred":"tao:has_database_id","subj":"T48","obj":"MESH:D044967"},{"id":"A34","pred":"tao:has_database_id","subj":"34","obj":"MESH:D007239"},{"id":"A48","pred":"tao:has_standard_notation","subj":"T41","obj":"p.D614G"},{"id":"A77","pred":"Memo","subj":"T41","obj":"MESH:D009154"},{"id":"A61","pred":"tao:has_standard_notation","subj":"T11","obj":"p.G614"},{"id":"A35","pred":"tao:has_database_id","subj":"35","obj":"MESH:C000657245"},{"id":"A63","pred":"tao:has_standard_notation","subj":"T13","obj":"p.D614"},{"id":"A41","pred":"tao:has_database_id","subj":"T34","obj":"Tax:10035"},{"id":"A62","pred":"tao:has_standard_notation","subj":"T12","obj":"p.D614"},{"id":"A60","pred":"tao:has_standard_notation","subj":"T9","obj":"p.G614"},{"id":"A64","pred":"Memo","subj":"T45","obj":"MESH:D009500"},{"id":"A46","pred":"ForCovid19","subj":"T38","obj":"drug"},{"id":"A83","pred":"tao:has_database_id","subj":"T46","obj":"BioSample:SAMN14384141"},{"id":"A84","pred":"tao:has_database_id","subj":"T47","obj":"Tax:2697049"}],"namespaces":[{"prefix":"_base","uri":"https://www.uniprot.org/uniprot/testbase"},{"prefix":"UniProtKB","uri":"https://www.uniprot.org/uniprot/"},{"prefix":"uniprot","uri":"https://www.uniprot.org/uniprotkb/"}],"text":"Sera from D614-infected hamsters exhibit modestly higher neutralization titers against G614 virus than against D614 virus, indicating that (i) the mutation may not reduce the ability of vaccines in clinical trials to protect against COVID-19 and (ii) therapeutic antibodies should be tested against the circulating G614 virus."}