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LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 637-641 Body_part denotes tube http://purl.obolibrary.org/obo/UBERON_0000025

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 13-22 Phenotype denotes Emphysema http://purl.obolibrary.org/obo/HP_0002097
T2 98-107 Phenotype denotes emphysema http://purl.obolibrary.org/obo/HP_0002097
T3 195-204 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T4 314-323 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T5 380-389 Phenotype denotes emphysema http://purl.obolibrary.org/obo/HP_0002097
T6 417-429 Phenotype denotes pneumothorax http://purl.obolibrary.org/obo/HP_0002107
T7 476-485 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T8 529-538 Phenotype denotes emphysema http://purl.obolibrary.org/obo/HP_0002097
T9 602-614 Phenotype denotes pneumothorax http://purl.obolibrary.org/obo/HP_0002107
T10 898-907 Phenotype denotes emphysema http://purl.obolibrary.org/obo/HP_0002097
T11 1143-1155 Phenotype denotes pneumothorax http://purl.obolibrary.org/obo/HP_0002107
T12 1337-1346 Phenotype denotes emphysema http://purl.obolibrary.org/obo/HP_0002097
T13 1375-1384 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T14 1508-1513 Phenotype denotes cough http://purl.obolibrary.org/obo/HP_0012735

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 13-22 Disease denotes Emphysema http://purl.obolibrary.org/obo/MONDO_0004849
T2 40-48 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T3 49-58 Disease denotes Infection http://purl.obolibrary.org/obo/MONDO_0005550
T4 98-107 Disease denotes emphysema http://purl.obolibrary.org/obo/MONDO_0004849
T5 134-181 Disease denotes severe acute respiratory syndrome coronavirus 2 http://purl.obolibrary.org/obo/MONDO_0100096
T6 134-167 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T7 183-191 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T8 195-204 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T9 303-311 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T10 314-323 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T11 380-389 Disease denotes emphysema http://purl.obolibrary.org/obo/MONDO_0004849
T12 417-429 Disease denotes pneumothorax http://purl.obolibrary.org/obo/MONDO_0002076
T13 465-473 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T14 476-485 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T15 529-538 Disease denotes emphysema http://purl.obolibrary.org/obo/MONDO_0004849
T16 602-614 Disease denotes pneumothorax http://purl.obolibrary.org/obo/MONDO_0002076
T17 898-907 Disease denotes emphysema http://purl.obolibrary.org/obo/MONDO_0004849
T18 1104-1106 Disease denotes SE http://purl.obolibrary.org/obo/MONDO_0002125
T19 1143-1155 Disease denotes pneumothorax http://purl.obolibrary.org/obo/MONDO_0002076
T20 1193-1203 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T21 1337-1346 Disease denotes emphysema http://purl.obolibrary.org/obo/MONDO_0004849
T22 1364-1372 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T23 1375-1384 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T24 1432-1441 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 60-61 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T2 111-112 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T3 403-404 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T4 637-641 http://purl.obolibrary.org/obo/UBERON_0000025 denotes tube
T5 922-923 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T6 1405-1406 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T7 1551-1552 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T8 1605-1606 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T9 1652-1653 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 1104-1106 Chemical denotes SE http://purl.obolibrary.org/obo/CHEBI_74813

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
4 13-22 Disease denotes Emphysema MESH:D004646
5 26-34 Species denotes Patients Tax:9606
6 40-48 Disease denotes COVID-19 MESH:C000657245
7 49-58 Disease denotes Infection MESH:D007239
32 85-107 Disease denotes Subcutaneous emphysema MESH:D013352
33 134-181 Species denotes severe acute respiratory syndrome coronavirus 2 Tax:2697049
34 183-193 Species denotes SARS-CoV-2 Tax:2697049
35 195-204 Disease denotes pneumonia MESH:D011014
36 289-297 Species denotes patients Tax:9606
37 303-323 Disease denotes SARS-CoV-2 pneumonia MESH:C000657245
38 380-389 Disease denotes emphysema MESH:D004646
39 417-429 Disease denotes pneumothorax MESH:D011030
40 438-446 Species denotes patients Tax:9606
41 465-485 Disease denotes SARS-CoV-2 pneumonia MESH:C000657245
42 529-538 Disease denotes emphysema MESH:D004646
43 602-614 Disease denotes pneumothorax MESH:D011030
44 738-746 Species denotes patients Tax:9606
45 818-825 Species denotes patient Tax:9606
46 898-907 Disease denotes emphysema MESH:D004646
47 1073-1081 Species denotes Patients Tax:9606
48 1143-1155 Disease denotes pneumothorax MESH:D011030
49 1168-1175 Disease denotes rupture MESH:D012421
50 1181-1203 Disease denotes necrotizing infections MESH:D007239
51 1324-1346 Disease denotes subcutaneous emphysema MESH:D013352
52 1350-1358 Species denotes patients Tax:9606
53 1364-1384 Disease denotes SARS-CoV-2 pneumonia MESH:C000657245
54 1432-1441 Disease denotes infection MESH:D007239
55 1508-1513 Disease denotes cough MESH:D003371

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-59 Sentence denotes Subcutaneous Emphysema in Patients With COVID-19 Infection:
T2 60-84 Sentence denotes A Report of Three Cases.
T3 85-262 Sentence denotes Subcutaneous emphysema is a rare complication of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) pneumonia that should prompt immediate attention to find its cause.
T4 263-813 Sentence denotes Herein, we describe three patients with SARS-CoV-2 pneumonia who were admitted to the ICU and developed subcutaneous emphysema and one with a concomitant pneumothorax.  Three patients with diagnosis of SARS-CoV-2 pneumonia admitted to the ICU developed subcutaneous emphysema during the hospital admission. One of them who had concomitant pneumothorax required thoracostomy tube for treatment and the other two were monitored clinically without additional interventions. Two patients died during the first two to three weeks of their hospital course.
T5 814-884 Sentence denotes One patient survived and was discharged after 63 days in the hospital.
T6 885-1028 Sentence denotes Subcutaneous emphysema is considered a non-life-threatening condition and is usually self-limited requiring supportive treatment in mild cases.
T7 1029-1262 Sentence denotes For such cases, observation is appropriate. Patients with newly discovered SE life-threatening pathology, such as pneumothorax, esophageal rupture, and necrotizing infections, should be investigated depending on the clinical setting.
T8 1263-1385 Sentence denotes This is one of the first paper that shows the development of subcutaneous emphysema in patients with SARS-CoV-2 pneumonia.
T9 1386-1705 Sentence denotes This may represent a rare complication of the infection as well as may be attributable to other factors such as increased cough and mechanical ventilation. There is a need for studies on the clinical characteristics of a disease with still many unknown features and a wide clinical spectrum that is still being defined.