PubMed:33035581
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/33035581","sourcedb":"PubMed","sourceid":"33035581","source_url":"https://www.ncbi.nlm.nih.gov/pubmed/33035581","text":"Can endolysosomal deacidification and inhibition of autophagy prevent severe COVID-19?\nThe possibility is examined that immunomodulatory pharmacotherapy may be clinically useful in managing the pandemic coronavirus disease 2019 (COVID-19), known to result from infection by the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), a positive-sense single-stranded RNA virus. The dominant route of cell entry of the coronavirus is via phagocytosis, with ensconcement in endosomes thereafter proceeding via the endosomal pathway, involving transfer from early (EEs) to late endosomes (LEs) and ultimately into lysosomes via endolysosomal fusion. EE to LE transportation is a rate-limiting step for coronaviruses. Hence inhibition or dysregulation of endosomal trafficking could potentially inhibit SARS-CoV-2 replication. Furthermore, the acidic luminal pH of the endolysosomal system is critical for the activity of numerous pH-sensitive hydrolytic enzymes. Golgi sub-compartments and Golgi-derived secretory vesicles also depend on being mildly acidic for optimal function and structure. Activation of endosomal toll-like receptors by viral RNA can upregulate inflammatory mediators and contribute to a systemic inflammatory cytokine storm, associated with a worsened clinical outcome in COVID-19. Such endosomal toll-like receptors could be inhibited by the use of pharmacological agents which increase endosomal pH, thereby reducing the activity of acid-dependent endosomal proteases required for their activity and/or assembly, leading to suppression of antigen-presenting cell activity, decreased autoantibody secretion, decreased nuclear factor-kappa B activity and decreased pro-inflammatory cytokine production. It is also noteworthy that SARS-CoV-2 inhibits autophagy, predisposing infected cells to apoptosis. It is therefore also suggested that further pharmacological inhibition of autophagy might encourage the apoptotic clearance of SARS-CoV-2-infected cells.","tracks":[{"project":"Inflammaging","denotations":[{"id":"T1","span":{"begin":0,"end":86},"obj":"Sentence"},{"id":"T2","span":{"begin":87,"end":383},"obj":"Sentence"},{"id":"T3","span":{"begin":384,"end":652},"obj":"Sentence"},{"id":"T4","span":{"begin":653,"end":719},"obj":"Sentence"},{"id":"T5","span":{"begin":720,"end":828},"obj":"Sentence"},{"id":"T6","span":{"begin":829,"end":965},"obj":"Sentence"},{"id":"T7","span":{"begin":966,"end":1096},"obj":"Sentence"},{"id":"T8","span":{"begin":1097,"end":1306},"obj":"Sentence"},{"id":"T9","span":{"begin":1307,"end":1727},"obj":"Sentence"},{"id":"T10","span":{"begin":1728,"end":1827},"obj":"Sentence"},{"id":"T11","span":{"begin":1828,"end":1981},"obj":"Sentence"},{"id":"T1","span":{"begin":0,"end":86},"obj":"Sentence"},{"id":"T2","span":{"begin":87,"end":383},"obj":"Sentence"},{"id":"T3","span":{"begin":384,"end":652},"obj":"Sentence"},{"id":"T4","span":{"begin":653,"end":719},"obj":"Sentence"},{"id":"T5","span":{"begin":720,"end":828},"obj":"Sentence"},{"id":"T6","span":{"begin":829,"end":965},"obj":"Sentence"},{"id":"T7","span":{"begin":966,"end":1096},"obj":"Sentence"},{"id":"T8","span":{"begin":1097,"end":1306},"obj":"Sentence"},{"id":"T9","span":{"begin":1307,"end":1727},"obj":"Sentence"},{"id":"T10","span":{"begin":1728,"end":1827},"obj":"Sentence"},{"id":"T11","span":{"begin":1828,"end":1981},"obj":"Sentence"}],"attributes":[{"subj":"T1","pred":"source","obj":"Inflammaging"},{"subj":"T2","pred":"source","obj":"Inflammaging"},{"subj":"T3","pred":"source","obj":"Inflammaging"},{"subj":"T4","pred":"source","obj":"Inflammaging"},{"subj":"T5","pred":"source","obj":"Inflammaging"},{"subj":"T6","pred":"source","obj":"Inflammaging"},{"subj":"T7","pred":"source","obj":"Inflammaging"},{"subj":"T8","pred":"source","obj":"Inflammaging"},{"subj":"T9","pred":"source","obj":"Inflammaging"},{"subj":"T10","pred":"source","obj":"Inflammaging"},{"subj":"T11","pred":"source","obj":"Inflammaging"},{"subj":"T1","pred":"source","obj":"Inflammaging"},{"subj":"T2","pred":"source","obj":"Inflammaging"},{"subj":"T3","pred":"source","obj":"Inflammaging"},{"subj":"T4","pred":"source","obj":"Inflammaging"},{"subj":"T5","pred":"source","obj":"Inflammaging"},{"subj":"T6","pred":"source","obj":"Inflammaging"},{"subj":"T7","pred":"source","obj":"Inflammaging"},{"subj":"T8","pred":"source","obj":"Inflammaging"},{"subj":"T9","pred":"source","obj":"Inflammaging"},{"subj":"T10","pred":"source","obj":"Inflammaging"},{"subj":"T11","pred":"source","obj":"Inflammaging"}]},{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T1","span":{"begin":373,"end":376},"obj":"Body_part"},{"id":"T2","span":{"begin":406,"end":410},"obj":"Body_part"},{"id":"T3","span":{"begin":478,"end":487},"obj":"Body_part"},{"id":"T4","span":{"begin":518,"end":527},"obj":"Body_part"},{"id":"T5","span":{"begin":576,"end":590},"obj":"Body_part"},{"id":"T6","span":{"begin":592,"end":595},"obj":"Body_part"},{"id":"T8","span":{"begin":617,"end":626},"obj":"Body_part"},{"id":"T9","span":{"begin":757,"end":766},"obj":"Body_part"},{"id":"T10","span":{"begin":976,"end":988},"obj":"Body_part"},{"id":"T11","span":{"begin":1111,"end":1120},"obj":"Body_part"},{"id":"T12","span":{"begin":1150,"end":1153},"obj":"Body_part"},{"id":"T13","span":{"begin":1234,"end":1242},"obj":"Body_part"},{"id":"T14","span":{"begin":1312,"end":1321},"obj":"Body_part"},{"id":"T15","span":{"begin":1413,"end":1422},"obj":"Body_part"},{"id":"T16","span":{"begin":1475,"end":1484},"obj":"Body_part"},{"id":"T17","span":{"begin":1566,"end":1589},"obj":"Body_part"},{"id":"T18","span":{"begin":1585,"end":1589},"obj":"Body_part"},{"id":"T19","span":{"begin":1707,"end":1715},"obj":"Body_part"},{"id":"T20","span":{"begin":1808,"end":1813},"obj":"Body_part"},{"id":"T21","span":{"begin":1975,"end":1980},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"fma_id","subj":"T1","obj":"http://purl.org/sig/ont/fma/fma67095"},{"id":"A2","pred":"fma_id","subj":"T2","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A3","pred":"fma_id","subj":"T3","obj":"http://purl.org/sig/ont/fma/fma67180"},{"id":"A4","pred":"fma_id","subj":"T4","obj":"http://purl.org/sig/ont/fma/fma67180"},{"id":"A5","pred":"fma_id","subj":"T5","obj":"http://purl.org/sig/ont/fma/fma67467"},{"id":"A6","pred":"fma_id","subj":"T6","obj":"http://purl.org/sig/ont/fma/fma63048"},{"id":"A7","pred":"fma_id","subj":"T6","obj":"http://purl.org/sig/ont/fma/fma67467"},{"id":"A8","pred":"fma_id","subj":"T8","obj":"http://purl.org/sig/ont/fma/fma63836"},{"id":"A9","pred":"fma_id","subj":"T9","obj":"http://purl.org/sig/ont/fma/fma67180"},{"id":"A10","pred":"fma_id","subj":"T10","obj":"http://purl.org/sig/ont/fma/fma76577"},{"id":"A11","pred":"fma_id","subj":"T11","obj":"http://purl.org/sig/ont/fma/fma67180"},{"id":"A12","pred":"fma_id","subj":"T12","obj":"http://purl.org/sig/ont/fma/fma67095"},{"id":"A13","pred":"fma_id","subj":"T13","obj":"http://purl.org/sig/ont/fma/fma84050"},{"id":"A14","pred":"fma_id","subj":"T14","obj":"http://purl.org/sig/ont/fma/fma67180"},{"id":"A15","pred":"fma_id","subj":"T15","obj":"http://purl.org/sig/ont/fma/fma67180"},{"id":"A16","pred":"fma_id","subj":"T16","obj":"http://purl.org/sig/ont/fma/fma67180"},{"id":"A17","pred":"fma_id","subj":"T17","obj":"http://purl.org/sig/ont/fma/fma273565"},{"id":"A18","pred":"fma_id","subj":"T18","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A19","pred":"fma_id","subj":"T19","obj":"http://purl.org/sig/ont/fma/fma84050"},{"id":"A20","pred":"fma_id","subj":"T20","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A21","pred":"fma_id","subj":"T21","obj":"http://purl.org/sig/ont/fma/fma68646"},{"subj":"T1","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T3","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T4","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T5","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T6","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T8","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T9","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T10","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T11","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T12","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T13","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T14","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T15","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T16","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T17","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T18","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T19","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T20","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T21","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T1","span":{"begin":77,"end":85},"obj":"Disease"},{"id":"T2","span":{"begin":203,"end":227},"obj":"Disease"},{"id":"T3","span":{"begin":229,"end":237},"obj":"Disease"},{"id":"T4","span":{"begin":261,"end":270},"obj":"Disease"},{"id":"T5","span":{"begin":278,"end":325},"obj":"Disease"},{"id":"T6","span":{"begin":278,"end":311},"obj":"Disease"},{"id":"T7","span":{"begin":327,"end":335},"obj":"Disease"},{"id":"T8","span":{"begin":653,"end":655},"obj":"Disease"},{"id":"T9","span":{"begin":805,"end":813},"obj":"Disease"},{"id":"T10","span":{"begin":1297,"end":1305},"obj":"Disease"},{"id":"T11","span":{"begin":1755,"end":1763},"obj":"Disease"},{"id":"T12","span":{"begin":1955,"end":1963},"obj":"Disease"}],"attributes":[{"id":"A1","pred":"mondo_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A2","pred":"mondo_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A3","pred":"mondo_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A4","pred":"mondo_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"id":"A5","pred":"mondo_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A6","pred":"mondo_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A7","pred":"mondo_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A8","pred":"mondo_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/MONDO_0011229"},{"id":"A9","pred":"mondo_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A10","pred":"mondo_id","subj":"T10","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A11","pred":"mondo_id","subj":"T11","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A12","pred":"mondo_id","subj":"T12","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"subj":"T1","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T3","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T4","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T5","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T6","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T7","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T8","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T9","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T10","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T11","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T12","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T1","span":{"begin":340,"end":341},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T2","span":{"begin":377,"end":382},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T3","span":{"begin":406,"end":410},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T4","span":{"begin":617,"end":626},"obj":"http://purl.obolibrary.org/obo/GO_0005764"},{"id":"T5","span":{"begin":680,"end":681},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T6","span":{"begin":912,"end":920},"obj":"http://purl.obolibrary.org/obo/CLO_0001658"},{"id":"T7","span":{"begin":1097,"end":1107},"obj":"http://purl.obolibrary.org/obo/CLO_0001658"},{"id":"T8","span":{"begin":1210,"end":1211},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T9","span":{"begin":1266,"end":1267},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T10","span":{"begin":1448,"end":1456},"obj":"http://purl.obolibrary.org/obo/CLO_0001658"},{"id":"T11","span":{"begin":1514,"end":1522},"obj":"http://purl.obolibrary.org/obo/CLO_0001658"},{"id":"T12","span":{"begin":1585,"end":1589},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T13","span":{"begin":1590,"end":1598},"obj":"http://purl.obolibrary.org/obo/CLO_0001658"},{"id":"T14","span":{"begin":1665,"end":1666},"obj":"http://purl.obolibrary.org/obo/CLO_0001021"},{"id":"T15","span":{"begin":1667,"end":1675},"obj":"http://purl.obolibrary.org/obo/CLO_0001658"},{"id":"T16","span":{"begin":1808,"end":1813},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T17","span":{"begin":1975,"end":1980},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"attributes":[{"subj":"T1","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T3","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T4","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T5","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T6","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T7","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T8","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T9","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T10","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T11","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T12","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T13","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T14","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T15","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T16","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T17","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T1","span":{"begin":659,"end":661},"obj":"Chemical"},{"id":"T2","span":{"begin":1460,"end":1464},"obj":"Chemical"},{"id":"T3","span":{"begin":1566,"end":1573},"obj":"Chemical"}],"attributes":[{"id":"A1","pred":"chebi_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/CHEBI_74531"},{"id":"A2","pred":"chebi_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/CHEBI_37527"},{"id":"A3","pred":"chebi_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/CHEBI_59132"},{"subj":"T1","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T3","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T1","span":{"begin":52,"end":61},"obj":"http://purl.obolibrary.org/obo/GO_0016236"},{"id":"T2","span":{"begin":52,"end":61},"obj":"http://purl.obolibrary.org/obo/GO_0006914"},{"id":"T3","span":{"begin":443,"end":455},"obj":"http://purl.obolibrary.org/obo/GO_0006909"},{"id":"T4","span":{"begin":1623,"end":1632},"obj":"http://purl.obolibrary.org/obo/GO_0046903"},{"id":"T5","span":{"begin":1707,"end":1726},"obj":"http://purl.obolibrary.org/obo/GO_0001816"},{"id":"T6","span":{"begin":1775,"end":1784},"obj":"http://purl.obolibrary.org/obo/GO_0016236"},{"id":"T7","span":{"begin":1775,"end":1784},"obj":"http://purl.obolibrary.org/obo/GO_0006914"},{"id":"T8","span":{"begin":1817,"end":1826},"obj":"http://purl.obolibrary.org/obo/GO_0097194"},{"id":"T9","span":{"begin":1817,"end":1826},"obj":"http://purl.obolibrary.org/obo/GO_0006915"},{"id":"T10","span":{"begin":1902,"end":1911},"obj":"http://purl.obolibrary.org/obo/GO_0016236"},{"id":"T11","span":{"begin":1902,"end":1911},"obj":"http://purl.obolibrary.org/obo/GO_0006914"}],"attributes":[{"subj":"T1","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T3","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T4","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T5","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T6","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T7","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T8","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T9","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T10","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T11","pred":"source","obj":"LitCovid-PD-GO-BP"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"1","span":{"begin":77,"end":85},"obj":"Disease"},{"id":"15","span":{"begin":203,"end":227},"obj":"Disease"},{"id":"16","span":{"begin":229,"end":237},"obj":"Disease"},{"id":"17","span":{"begin":261,"end":270},"obj":"Disease"},{"id":"18","span":{"begin":278,"end":325},"obj":"Species"},{"id":"19","span":{"begin":327,"end":337},"obj":"Species"},{"id":"20","span":{"begin":424,"end":435},"obj":"Species"},{"id":"21","span":{"begin":705,"end":718},"obj":"Species"},{"id":"22","span":{"begin":805,"end":815},"obj":"Species"},{"id":"23","span":{"begin":853,"end":860},"obj":"Chemical"},{"id":"24","span":{"begin":1297,"end":1305},"obj":"Disease"},{"id":"25","span":{"begin":1755,"end":1765},"obj":"Species"},{"id":"26","span":{"begin":1799,"end":1807},"obj":"Disease"},{"id":"27","span":{"begin":1955,"end":1974},"obj":"Disease"}],"attributes":[{"id":"A1","pred":"tao:has_database_id","subj":"1","obj":"MESH:C000657245"},{"id":"A15","pred":"tao:has_database_id","subj":"15","obj":"MESH:C000657245"},{"id":"A16","pred":"tao:has_database_id","subj":"16","obj":"MESH:C000657245"},{"id":"A17","pred":"tao:has_database_id","subj":"17","obj":"MESH:D007239"},{"id":"A18","pred":"tao:has_database_id","subj":"18","obj":"Tax:2697049"},{"id":"A19","pred":"tao:has_database_id","subj":"19","obj":"Tax:2697049"},{"id":"A20","pred":"tao:has_database_id","subj":"20","obj":"Tax:11118"},{"id":"A21","pred":"tao:has_database_id","subj":"21","obj":"Tax:11118"},{"id":"A22","pred":"tao:has_database_id","subj":"22","obj":"Tax:2697049"},{"id":"A23","pred":"tao:has_database_id","subj":"23","obj":"MESH:D010634"},{"id":"A24","pred":"tao:has_database_id","subj":"24","obj":"MESH:C000657245"},{"id":"A25","pred":"tao:has_database_id","subj":"25","obj":"Tax:2697049"},{"id":"A26","pred":"tao:has_database_id","subj":"26","obj":"MESH:D007239"},{"id":"A27","pred":"tao:has_database_id","subj":"27","obj":"MESH:C000657245"},{"subj":"1","pred":"source","obj":"LitCovid-PubTator"},{"subj":"15","pred":"source","obj":"LitCovid-PubTator"},{"subj":"16","pred":"source","obj":"LitCovid-PubTator"},{"subj":"17","pred":"source","obj":"LitCovid-PubTator"},{"subj":"18","pred":"source","obj":"LitCovid-PubTator"},{"subj":"19","pred":"source","obj":"LitCovid-PubTator"},{"subj":"20","pred":"source","obj":"LitCovid-PubTator"},{"subj":"21","pred":"source","obj":"LitCovid-PubTator"},{"subj":"22","pred":"source","obj":"LitCovid-PubTator"},{"subj":"23","pred":"source","obj":"LitCovid-PubTator"},{"subj":"24","pred":"source","obj":"LitCovid-PubTator"},{"subj":"25","pred":"source","obj":"LitCovid-PubTator"},{"subj":"26","pred":"source","obj":"LitCovid-PubTator"},{"subj":"27","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T1","span":{"begin":0,"end":86},"obj":"Sentence"},{"id":"T2","span":{"begin":87,"end":383},"obj":"Sentence"},{"id":"T3","span":{"begin":384,"end":652},"obj":"Sentence"},{"id":"T4","span":{"begin":653,"end":719},"obj":"Sentence"},{"id":"T5","span":{"begin":720,"end":828},"obj":"Sentence"},{"id":"T6","span":{"begin":829,"end":965},"obj":"Sentence"},{"id":"T7","span":{"begin":966,"end":1096},"obj":"Sentence"},{"id":"T8","span":{"begin":1097,"end":1306},"obj":"Sentence"},{"id":"T9","span":{"begin":1307,"end":1727},"obj":"Sentence"},{"id":"T10","span":{"begin":1728,"end":1827},"obj":"Sentence"},{"id":"T11","span":{"begin":1828,"end":1981},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T1","pred":"source","obj":"LitCovid-sentences"},{"subj":"T2","pred":"source","obj":"LitCovid-sentences"},{"subj":"T3","pred":"source","obj":"LitCovid-sentences"},{"subj":"T4","pred":"source","obj":"LitCovid-sentences"},{"subj":"T5","pred":"source","obj":"LitCovid-sentences"},{"subj":"T6","pred":"source","obj":"LitCovid-sentences"},{"subj":"T7","pred":"source","obj":"LitCovid-sentences"},{"subj":"T8","pred":"source","obj":"LitCovid-sentences"},{"subj":"T9","pred":"source","obj":"LitCovid-sentences"},{"subj":"T10","pred":"source","obj":"LitCovid-sentences"},{"subj":"T11","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PD-HP","denotations":[{"id":"T1","span":{"begin":1234,"end":1248},"obj":"Phenotype"}],"attributes":[{"id":"A1","pred":"hp_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/HP_0033041"},{"subj":"T1","pred":"source","obj":"LitCovid-PD-HP"}]},{"project":"hydroxychloroquine","denotations":[{"id":"T1","span":{"begin":1234,"end":1248},"obj":"Phenotype"}],"attributes":[{"id":"A1","pred":"hp_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/HP_0033041"},{"subj":"T1","pred":"source","obj":"hydroxychloroquine"}]},{"project":"LitCovid_AGAC_only","denotations":[{"id":"p219954s11","span":{"begin":1158,"end":1168},"obj":"PosReg"},{"id":"p219954s12","span":{"begin":1169,"end":1181},"obj":"CPA"},{"id":"p219954s18","span":{"begin":1212,"end":1248},"obj":"MPA"},{"id":"p219955s49","span":{"begin":1600,"end":1609},"obj":"NegReg"},{"id":"p219955s50","span":{"begin":1610,"end":1632},"obj":"MPA"},{"id":"p219955s53","span":{"begin":1634,"end":1643},"obj":"NegReg"},{"id":"p219955s54","span":{"begin":1644,"end":1675},"obj":"MPA"},{"id":"p219955s61","span":{"begin":1680,"end":1689},"obj":"NegReg"},{"id":"p219955s62","span":{"begin":1690,"end":1726},"obj":"MPA"}],"attributes":[{"subj":"p219954s11","pred":"source","obj":"LitCovid_AGAC_only"},{"subj":"p219954s12","pred":"source","obj":"LitCovid_AGAC_only"},{"subj":"p219954s18","pred":"source","obj":"LitCovid_AGAC_only"},{"subj":"p219955s49","pred":"source","obj":"LitCovid_AGAC_only"},{"subj":"p219955s50","pred":"source","obj":"LitCovid_AGAC_only"},{"subj":"p219955s53","pred":"source","obj":"LitCovid_AGAC_only"},{"subj":"p219955s54","pred":"source","obj":"LitCovid_AGAC_only"},{"subj":"p219955s61","pred":"source","obj":"LitCovid_AGAC_only"},{"subj":"p219955s62","pred":"source","obj":"LitCovid_AGAC_only"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"Inflammaging","color":"#a7ec93","default":true},{"id":"LitCovid-PD-FMA-UBERON","color":"#ec93c1"},{"id":"LitCovid-PD-MONDO","color":"#93dbec"},{"id":"LitCovid-PD-CLO","color":"#ece393"},{"id":"LitCovid-PD-CHEBI","color":"#c993ec"},{"id":"LitCovid-PD-GO-BP","color":"#93ecaf"},{"id":"LitCovid-PubTator","color":"#ec9593"},{"id":"LitCovid-sentences","color":"#93abec"},{"id":"LitCovid-PD-HP","color":"#c5ec93"},{"id":"hydroxychloroquine","color":"#ec93df"},{"id":"LitCovid_AGAC_only","color":"#93ecdf"}]}]}}