PubMed:32970989 / 0-139
Annnotations
LitCovid-PD-FMA-UBERON
{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T1","span":{"begin":41,"end":56},"obj":"Body_part"},{"id":"T2","span":{"begin":41,"end":48},"obj":"Body_part"},{"id":"T3","span":{"begin":97,"end":104},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"fma_id","subj":"T1","obj":"http://purl.org/sig/ont/fma/fma63023"},{"id":"A2","pred":"fma_id","subj":"T2","obj":"http://purl.org/sig/ont/fma/fma67110"},{"id":"A3","pred":"fma_id","subj":"T3","obj":"http://purl.org/sig/ont/fma/fma67257"}],"text":"SARS-CoV-2 Infection Depends on Cellular Heparan Sulfate and ACE2.\nWe show that SARS-CoV-2 spike protein interacts with both cellular hepar"}
LitCovid-PD-MONDO
{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T1","span":{"begin":0,"end":8},"obj":"Disease"},{"id":"T2","span":{"begin":11,"end":20},"obj":"Disease"},{"id":"T3","span":{"begin":80,"end":88},"obj":"Disease"}],"attributes":[{"id":"A1","pred":"mondo_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A2","pred":"mondo_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"id":"A3","pred":"mondo_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":"SARS-CoV-2 Infection Depends on Cellular Heparan Sulfate and ACE2.\nWe show that SARS-CoV-2 spike protein interacts with both cellular hepar"}
LitCovid-PD-CHEBI
{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T1","span":{"begin":49,"end":56},"obj":"Chemical"},{"id":"T2","span":{"begin":97,"end":104},"obj":"Chemical"}],"attributes":[{"id":"A1","pred":"chebi_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/CHEBI_16189"},{"id":"A2","pred":"chebi_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"}],"text":"SARS-CoV-2 Infection Depends on Cellular Heparan Sulfate and ACE2.\nWe show that SARS-CoV-2 spike protein interacts with both cellular hepar"}
LitCovid-PD-GlycoEpitope
{"project":"LitCovid-PD-GlycoEpitope","denotations":[{"id":"T1","span":{"begin":41,"end":56},"obj":"GlycoEpitope"}],"attributes":[{"id":"A1","pred":"glyco_epitope_db_id","subj":"T1","obj":"http://www.glycoepitope.jp/epitopes/EP0086"}],"text":"SARS-CoV-2 Infection Depends on Cellular Heparan Sulfate and ACE2.\nWe show that SARS-CoV-2 spike protein interacts with both cellular hepar"}
LitCovid-sentences
{"project":"LitCovid-sentences","denotations":[{"id":"T1","span":{"begin":0,"end":66},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"SARS-CoV-2 Infection Depends on Cellular Heparan Sulfate and ACE2.\nWe show that SARS-CoV-2 spike protein interacts with both cellular hepar"}
LitCovid-PubTator
{"project":"LitCovid-PubTator","denotations":[{"id":"3","span":{"begin":0,"end":20},"obj":"Disease"},{"id":"4","span":{"begin":41,"end":56},"obj":"Chemical"},{"id":"5","span":{"begin":61,"end":65},"obj":"Gene"},{"id":"37","span":{"begin":80,"end":90},"obj":"Species"},{"id":"38","span":{"begin":91,"end":96},"obj":"Gene"}],"attributes":[{"id":"A3","pred":"tao:has_database_id","subj":"3","obj":"MESH:C000657245"},{"id":"A4","pred":"tao:has_database_id","subj":"4","obj":"MESH:D006497"},{"id":"A5","pred":"tao:has_database_id","subj":"5","obj":"Gene:59272"},{"id":"A37","pred":"tao:has_database_id","subj":"37","obj":"Tax:2697049"},{"id":"A38","pred":"tao:has_database_id","subj":"38","obj":"Gene:43740568"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"SARS-CoV-2 Infection Depends on Cellular Heparan Sulfate and ACE2.\nWe show that SARS-CoV-2 spike protein interacts with both cellular hepar"}
Covid19_manual_annotation_v2
{"project":"Covid19_manual_annotation_v2","denotations":[{"id":"37","span":{"begin":80,"end":90},"obj":"Species"},{"id":"38","span":{"begin":91,"end":96},"obj":"Gene"},{"id":"4","span":{"begin":41,"end":56},"obj":"Glycan"},{"id":"5","span":{"begin":61,"end":65},"obj":"Gene"},{"id":"T15","span":{"begin":32,"end":40},"obj":"Anatomy"},{"id":"T17","span":{"begin":105,"end":114},"obj":"Phenomena"},{"id":"T18","span":{"begin":125,"end":133},"obj":"Anatomy"},{"id":"T34","span":{"begin":21,"end":28},"obj":"Phenomena"},{"id":"T40","span":{"begin":11,"end":20},"obj":"Disease"},{"id":"T41","span":{"begin":0,"end":10},"obj":"Species"},{"id":"T50","span":{"begin":105,"end":114},"obj":"Phenomena"}],"relations":[{"id":"R3","pred":"of_a","subj":"T15","obj":"4"},{"id":"R4","pred":"is_a","subj":"T41","obj":"T34"},{"id":"R62","pred":"to","subj":"T34","obj":"4"},{"id":"R63","pred":"to","subj":"T34","obj":"5"},{"id":"R7","pred":"of_a","subj":"37","obj":"38"},{"id":"R8","pred":"is_a","subj":"38","obj":"T17"},{"id":"R82","pred":"is_a","subj":"38","obj":"T50"}],"attributes":[{"id":"A75","pred":"tao:has_database_id","subj":"T41","obj":"Tax:2697049"},{"id":"A74","pred":"tao:has_database_id","subj":"T40","obj":"MESH:D007239"},{"id":"A81","pred":"Memo","subj":"T34","obj":"MESH:D053585"},{"id":"A99","pred":"Memo","subj":"T50","obj":"MESH:D053585"},{"id":"A82","pred":"tao:has_database_id","subj":"T17","obj":"MESH:D000076662"},{"id":"A4","pred":"tao:has_database_id","subj":"4","obj":"MESH:D006497"},{"id":"A37","pred":"tao:has_database_id","subj":"37","obj":"Tax:2697049"},{"id":"A38","pred":"tao:has_database_id","subj":"38","obj":"Gene:43740568"},{"id":"A5","pred":"tao:has_database_id","subj":"5","obj":"Gene:59272"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"BioProject","uri":"https://www.ncbi.nlm.nih.gov/bioproject/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"},{"prefix":"HP","uri":"https://hpo.jax.org/app/browse/term/HP:"},{"prefix":"BioSample","uri":"https://www.ncbi.nlm.nih.gov/biosample/"}],"text":"SARS-CoV-2 Infection Depends on Cellular Heparan Sulfate and ACE2.\nWe show that SARS-CoV-2 spike protein interacts with both cellular hepar"}
Zoonoses
{"project":"Zoonoses","denotations":[{"id":"37","span":{"begin":80,"end":90},"obj":"Species"},{"id":"38","span":{"begin":91,"end":96},"obj":"Gene"},{"id":"4","span":{"begin":41,"end":56},"obj":"Glycan"},{"id":"5","span":{"begin":61,"end":65},"obj":"Gene"},{"id":"T15","span":{"begin":32,"end":40},"obj":"Anatomy"},{"id":"T17","span":{"begin":105,"end":114},"obj":"Phenomena"},{"id":"T18","span":{"begin":125,"end":133},"obj":"Anatomy"},{"id":"T34","span":{"begin":21,"end":28},"obj":"Phenomena"},{"id":"T40","span":{"begin":11,"end":20},"obj":"Disease"},{"id":"T41","span":{"begin":0,"end":10},"obj":"Species"},{"id":"T50","span":{"begin":105,"end":114},"obj":"Phenomena"}],"relations":[{"id":"R62","pred":"to","subj":"T34","obj":"4"},{"id":"R63","pred":"to","subj":"T34","obj":"5"},{"id":"R7","pred":"of_a","subj":"37","obj":"38"},{"id":"R8","pred":"is_a","subj":"38","obj":"T17"},{"id":"R82","pred":"is_a","subj":"38","obj":"T50"},{"id":"R3","pred":"of_a","subj":"T15","obj":"4"},{"id":"R4","pred":"is_a","subj":"T41","obj":"T34"}],"attributes":[{"id":"A81","pred":"Memo","subj":"T34","obj":"MESH:D053585"},{"id":"A37","pred":"tao:has_database_id","subj":"37","obj":"Tax:2697049"},{"id":"A99","pred":"Memo","subj":"T50","obj":"MESH:D053585"},{"id":"A82","pred":"tao:has_database_id","subj":"T17","obj":"MESH:D054884"},{"id":"A74","pred":"tao:has_database_id","subj":"T40","obj":"MESH:D007239"},{"id":"A38","pred":"tao:has_database_id","subj":"38","obj":"Gene:43740568"},{"id":"A75","pred":"tao:has_database_id","subj":"T41","obj":"Tax:2697049"},{"id":"A4","pred":"tao:has_database_id","subj":"4","obj":"MESH:D006497"},{"id":"A5","pred":"tao:has_database_id","subj":"5","obj":"Gene:59272"}],"text":"SARS-CoV-2 Infection Depends on Cellular Heparan Sulfate and ACE2.\nWe show that SARS-CoV-2 spike protein interacts with both cellular hepar"}
Inflammaging
{"project":"Inflammaging","denotations":[{"id":"T1","span":{"begin":0,"end":66},"obj":"Sentence"},{"id":"T1","span":{"begin":0,"end":66},"obj":"Sentence"}],"text":"SARS-CoV-2 Infection Depends on Cellular Heparan Sulfate and ACE2.\nWe show that SARS-CoV-2 spike protein interacts with both cellular hepar"}
Covid19_manual_annotation
{"project":"Covid19_manual_annotation","denotations":[{"id":"3","span":{"begin":0,"end":20},"obj":"Disease"},{"id":"37","span":{"begin":80,"end":90},"obj":"Species"},{"id":"38","span":{"begin":91,"end":96},"obj":"Gene"},{"id":"4","span":{"begin":41,"end":56},"obj":"Biological"},{"id":"5","span":{"begin":61,"end":65},"obj":"Gene"},{"id":"T15","span":{"begin":32,"end":40},"obj":"Biological"},{"id":"T17","span":{"begin":105,"end":114},"obj":"Interact"},{"id":"T18","span":{"begin":125,"end":133},"obj":"Biological"},{"id":"T34","span":{"begin":21,"end":28},"obj":"Depend"}],"relations":[{"id":"R23","pred":"of_a","subj":"T15","obj":"4"},{"id":"R25","pred":"of_a","subj":"37","obj":"38"},{"id":"R26","pred":"is_a","subj":"38","obj":"T17"},{"id":"R66","pred":"on","subj":"4","obj":"T34"},{"id":"R67","pred":"on","subj":"5","obj":"T34"},{"id":"R68","pred":"is_a","subj":"3","obj":"T34"}],"attributes":[{"id":"A4","pred":"tao:has_database_id","subj":"4","obj":"MESH:D006497"},{"id":"A37","pred":"tao:has_database_id","subj":"37","obj":"Tax:2697049"},{"id":"A38","pred":"tao:has_database_id","subj":"38","obj":"Gene:43740568"},{"id":"A3","pred":"tao:has_database_id","subj":"3","obj":"MESH:C000657245"},{"id":"A5","pred":"tao:has_database_id","subj":"5","obj":"Gene:59272"}],"text":"SARS-CoV-2 Infection Depends on Cellular Heparan Sulfate and ACE2.\nWe show that SARS-CoV-2 spike protein interacts with both cellular hepar"}
mondo_disease
{"project":"mondo_disease","denotations":[{"id":"T1","span":{"begin":0,"end":10},"obj":"Disease"},{"id":"T2","span":{"begin":11,"end":20},"obj":"Disease"},{"id":"T3","span":{"begin":80,"end":90},"obj":"Disease"}],"attributes":[{"id":"A1","pred":"mondo_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A2","pred":"mondo_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"id":"A3","pred":"mondo_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"}],"text":"SARS-CoV-2 Infection Depends on Cellular Heparan Sulfate and ACE2.\nWe show that SARS-CoV-2 spike protein interacts with both cellular hepar"}
NCBITAXON
{"project":"NCBITAXON","denotations":[{"id":"T1","span":{"begin":0,"end":8},"obj":"OrganismTaxon"},{"id":"T2","span":{"begin":80,"end":88},"obj":"OrganismTaxon"}],"attributes":[{"id":"A1","pred":"db_id","subj":"T1","obj":"694009"},{"id":"A2","pred":"db_id","subj":"T2","obj":"694009"}],"text":"SARS-CoV-2 Infection Depends on Cellular Heparan Sulfate and ACE2.\nWe show that SARS-CoV-2 spike protein interacts with both cellular hepar"}
Glycosmos15-GlycoEpitope
{"project":"Glycosmos15-GlycoEpitope","denotations":[{"id":"T1","span":{"begin":41,"end":56},"obj":"http://purl.jp/bio/12/glyco/glycan#Glycan_epitope"}],"attributes":[{"id":"A1","pred":"glycoepitope_id","subj":"T1","obj":"http://www.glycoepitope.jp/epitopes/EP0086"}],"text":"SARS-CoV-2 Infection Depends on Cellular Heparan Sulfate and ACE2.\nWe show that SARS-CoV-2 spike protein interacts with both cellular hepar"}