PubMed:32938496 / 2471-2732 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/32938496","sourcedb":"PubMed","sourceid":"32938496","source_url":"https://www.ncbi.nlm.nih.gov/pubmed/32938496","text":"Patients must present elevation of inflammatory parameters (IL-6 \u003e 40 pg/mL or d-dimer \u003e1.0 mcg/ml) or, alternatively, progressive worsening in at least two of these inflammatory parameters in the prior 24-48h: CRP, LDH, serum ferritin, lymphopenia, or d-dimer.","tracks":[{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T5","span":{"begin":221,"end":226},"obj":"Body_part"}],"attributes":[{"id":"A5","pred":"uberon_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/UBERON_0001977"},{"subj":"T5","pred":"source","obj":"LitCovid-PD-UBERON"}]},{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T5","span":{"begin":221,"end":226},"obj":"Body_part"}],"attributes":[{"id":"A5","pred":"fma_id","subj":"T5","obj":"http://purl.org/sig/ont/fma/fma63083"},{"subj":"T5","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T18","span":{"begin":237,"end":248},"obj":"Disease"}],"attributes":[{"id":"A18","pred":"mondo_id","subj":"T18","obj":"http://purl.obolibrary.org/obo/MONDO_0003783"},{"subj":"T18","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T19","span":{"begin":70,"end":72},"obj":"http://purl.obolibrary.org/obo/CLO_0008426"}],"attributes":[{"subj":"T19","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T11","span":{"begin":60,"end":62},"obj":"Chemical"}],"attributes":[{"id":"A11","pred":"chebi_id","subj":"T11","obj":"http://purl.obolibrary.org/obo/CHEBI_63895"},{"id":"A12","pred":"chebi_id","subj":"T11","obj":"http://purl.obolibrary.org/obo/CHEBI_74072"},{"subj":"T11","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T17","span":{"begin":0,"end":261},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T17","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"114","span":{"begin":0,"end":8},"obj":"Species"},{"id":"115","span":{"begin":60,"end":64},"obj":"Gene"},{"id":"116","span":{"begin":211,"end":214},"obj":"Gene"},{"id":"117","span":{"begin":237,"end":248},"obj":"Disease"}],"attributes":[{"id":"A114","pred":"tao:has_database_id","subj":"114","obj":"Tax:9606"},{"id":"A115","pred":"tao:has_database_id","subj":"115","obj":"Gene:3569"},{"id":"A116","pred":"tao:has_database_id","subj":"116","obj":"Gene:1401"},{"id":"A117","pred":"tao:has_database_id","subj":"117","obj":"MESH:D008231"},{"subj":"114","pred":"source","obj":"LitCovid-PubTator"},{"subj":"115","pred":"source","obj":"LitCovid-PubTator"},{"subj":"116","pred":"source","obj":"LitCovid-PubTator"},{"subj":"117","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]},{"project":"LitCovid-PD-HP","denotations":[{"id":"T10","span":{"begin":237,"end":248},"obj":"Phenotype"}],"attributes":[{"id":"A10","pred":"hp_id","subj":"T10","obj":"http://purl.obolibrary.org/obo/HP_0001888"},{"subj":"T10","pred":"source","obj":"LitCovid-PD-HP"}]},{"project":"Covid19_manual_annotation_v2","denotations":[{"id":"114","span":{"begin":0,"end":8},"obj":"Species"},{"id":"115","span":{"begin":60,"end":64},"obj":"Gene"},{"id":"116","span":{"begin":211,"end":214},"obj":"Gene"},{"id":"117","span":{"begin":237,"end":248},"obj":"Disease"},{"id":"T113","span":{"begin":65,"end":69},"obj":"Number"},{"id":"T114","span":{"begin":216,"end":219},"obj":"Gene"},{"id":"T115","span":{"begin":227,"end":235},"obj":"Gene"},{"id":"T116","span":{"begin":144,"end":156},"obj":"Number"},{"id":"T117","span":{"begin":203,"end":209},"obj":"Duration"},{"id":"T214","span":{"begin":79,"end":86},"obj":"Index"},{"id":"T215","span":{"begin":131,"end":140},"obj":"NegativeRegulation"},{"id":"T45","span":{"begin":87,"end":91},"obj":"Number"},{"id":"T46","span":{"begin":253,"end":260},"obj":"Index"},{"id":"T99489","span":{"begin":221,"end":226},"obj":"Anatomy"},{"id":"T99491","span":{"begin":119,"end":130},"obj":"PositiveRegulation"},{"id":"T99495","span":{"begin":92,"end":98},"obj":"Unit"},{"id":"T99496","span":{"begin":70,"end":75},"obj":"Unit"}],"relations":[{"id":"R130","pred":"in","subj":"T99489","obj":"T115"},{"id":"R144","pred":"is_a","subj":"T99491","obj":"T215"},{"id":"R165","pred":"associate_with","subj":"T113","obj":"T99496"},{"id":"R166","pred":"associate_with","subj":"T45","obj":"T99495"},{"id":"R89","pred":"associate_with","subj":"T113","obj":"115"},{"id":"R90","pred":"associate_with","subj":"T45","obj":"T214"},{"id":"R91","pred":"is_a","subj":"T215","obj":"116"},{"id":"R92","pred":"is_a","subj":"T215","obj":"T114"},{"id":"R93","pred":"is_a","subj":"T215","obj":"T115"},{"id":"R94","pred":"is_a","subj":"T215","obj":"117"},{"id":"R95","pred":"is_a","subj":"T215","obj":"T46"},{"id":"R96","pred":"in","subj":"T117","obj":"T215"}],"attributes":[{"id":"A97016","pred":"ForCovid19","subj":"T116","obj":"inclusion_criteria"},{"id":"A117","pred":"tao:has_database_id","subj":"117","obj":"MESH:D008231"},{"id":"A97019","pred":"ForCovid19","subj":"117","obj":"inclusion_criteria"},{"id":"A97018","pred":"ForCovid19","subj":"T115","obj":"inclusion_criteria"},{"id":"A97056","pred":"tao:has_database_id","subj":"T115","obj":"MESH:D005293"},{"id":"A97002","pred":"tao:has_database_id","subj":"T46","obj":"MESH:C036309"},{"id":"A97014","pred":"ForCovid19","subj":"115","obj":"inclusion_criteria"},{"id":"A97020","pred":"ForCovid19","subj":"T46","obj":"inclusion_criteria"},{"id":"A97013","pred":"ForCovid19","subj":"T113","obj":"inclusion_criteria"},{"id":"A97012","pred":"ForCovid19","subj":"T45","obj":"inclusion_criteria"},{"id":"A97021","pred":"ForCovid19","subj":"T117","obj":"inclusion_criteria"},{"id":"A97017","pred":"ForCovid19","subj":"T114","obj":"inclusion_criteria"},{"id":"A97070","pred":"tao:has_database_id","subj":"T114","obj":"MESH:D007770"},{"id":"A97057","pred":"tao:has_database_id","subj":"T99489","obj":"MESH:D044967"},{"id":"A97058","pred":"ForCovid19","subj":"T99489","obj":"inclusion_criteria"},{"id":"A97001","pred":"tao:has_database_id","subj":"T214","obj":"MESH:C036309"},{"id":"A97015","pred":"ForCovid19","subj":"T214","obj":"inclusion_criteria"},{"id":"A97022","pred":"ForCovid19","subj":"116","obj":"inclusion_criteria"},{"id":"A115","pred":"tao:has_database_id","subj":"115","obj":"Gene:3569"},{"id":"A114","pred":"tao:has_database_id","subj":"114","obj":"Tax:9606"},{"id":"A116","pred":"tao:has_database_id","subj":"116","obj":"Gene:1401"},{"subj":"114","pred":"source","obj":"Covid19_manual_annotation_v2"},{"subj":"115","pred":"source","obj":"Covid19_manual_annotation_v2"},{"subj":"116","pred":"source","obj":"Covid19_manual_annotation_v2"},{"subj":"117","pred":"source","obj":"Covid19_manual_annotation_v2"},{"subj":"T113","pred":"source","obj":"Covid19_manual_annotation_v2"},{"subj":"T114","pred":"source","obj":"Covid19_manual_annotation_v2"},{"subj":"T115","pred":"source","obj":"Covid19_manual_annotation_v2"},{"subj":"T116","pred":"source","obj":"Covid19_manual_annotation_v2"},{"subj":"T117","pred":"source","obj":"Covid19_manual_annotation_v2"},{"subj":"T214","pred":"source","obj":"Covid19_manual_annotation_v2"},{"subj":"T215","pred":"source","obj":"Covid19_manual_annotation_v2"},{"subj":"T45","pred":"source","obj":"Covid19_manual_annotation_v2"},{"subj":"T46","pred":"source","obj":"Covid19_manual_annotation_v2"},{"subj":"T99489","pred":"source","obj":"Covid19_manual_annotation_v2"},{"subj":"T99491","pred":"source","obj":"Covid19_manual_annotation_v2"},{"subj":"T99495","pred":"source","obj":"Covid19_manual_annotation_v2"},{"subj":"T99496","pred":"source","obj":"Covid19_manual_annotation_v2"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"BioProject","uri":"https://www.ncbi.nlm.nih.gov/bioproject/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"},{"prefix":"HP","uri":"https://hpo.jax.org/app/browse/term/HP:"},{"prefix":"BioSample","uri":"https://www.ncbi.nlm.nih.gov/biosample/"}]},{"project":"Zoonoses","denotations":[{"id":"114","span":{"begin":0,"end":8},"obj":"Species"},{"id":"115","span":{"begin":60,"end":64},"obj":"Gene"},{"id":"116","span":{"begin":211,"end":214},"obj":"Gene"},{"id":"117","span":{"begin":237,"end":248},"obj":"Disease"},{"id":"T113","span":{"begin":65,"end":69},"obj":"Number"},{"id":"T114","span":{"begin":216,"end":219},"obj":"Gene"},{"id":"T115","span":{"begin":227,"end":235},"obj":"Gene"},{"id":"T116","span":{"begin":144,"end":156},"obj":"Number"},{"id":"T117","span":{"begin":203,"end":209},"obj":"Duration"},{"id":"T214","span":{"begin":79,"end":86},"obj":"Index"},{"id":"T215","span":{"begin":131,"end":140},"obj":"NegativeRegulation"},{"id":"T45","span":{"begin":87,"end":91},"obj":"Number"},{"id":"T46","span":{"begin":253,"end":260},"obj":"Index"},{"id":"T99489","span":{"begin":221,"end":226},"obj":"Anatomy"},{"id":"T99491","span":{"begin":119,"end":130},"obj":"PositiveRegulation"},{"id":"T99495","span":{"begin":92,"end":98},"obj":"Unit"},{"id":"T99496","span":{"begin":70,"end":75},"obj":"Unit"}],"relations":[{"id":"R130","pred":"in","subj":"T99489","obj":"T115"},{"id":"R144","pred":"is_a","subj":"T99491","obj":"T215"},{"id":"R165","pred":"associate_with","subj":"T113","obj":"T99496"},{"id":"R166","pred":"associate_with","subj":"T45","obj":"T99495"},{"id":"R89","pred":"associate_with","subj":"T113","obj":"115"},{"id":"R90","pred":"associate_with","subj":"T45","obj":"T214"},{"id":"R91","pred":"is_a","subj":"T215","obj":"116"},{"id":"R92","pred":"is_a","subj":"T215","obj":"T114"},{"id":"R93","pred":"is_a","subj":"T215","obj":"T115"},{"id":"R94","pred":"is_a","subj":"T215","obj":"117"},{"id":"R95","pred":"is_a","subj":"T215","obj":"T46"},{"id":"R96","pred":"in","subj":"T117","obj":"T215"}],"attributes":[{"id":"A97002","pred":"tao:has_database_id","subj":"T46","obj":"MESH:C036309"},{"id":"A97125","pred":"ForZoonoses","subj":"T46","obj":"inclusion_criteria"},{"id":"A117","pred":"tao:has_database_id","subj":"117","obj":"MESH:D008231"},{"id":"A97126","pred":"ForZoonoses","subj":"117","obj":"inclusion_criteria"},{"id":"A97108","pred":"ForZoonoses","subj":"T113","obj":"inclusion_criteria"},{"id":"A115","pred":"tao:has_database_id","subj":"115","obj":"Gene:3569"},{"id":"A97057","pred":"tao:has_database_id","subj":"T99489","obj":"MESH:D044967"},{"id":"A97120","pred":"ForZoonoses","subj":"115","obj":"inclusion_criteria"},{"id":"A97128","pred":"ForZoonoses","subj":"T99489","obj":"inclusion_criteria"},{"id":"A97001","pred":"tao:has_database_id","subj":"T214","obj":"MESH:C036309"},{"id":"A97114","pred":"ForZoonoses","subj":"T214","obj":"inclusion_criteria"},{"id":"A97109","pred":"ForZoonoses","subj":"T45","obj":"inclusion_criteria"},{"id":"A116","pred":"tao:has_database_id","subj":"116","obj":"Gene:1401"},{"id":"A97124","pred":"ForZoonoses","subj":"116","obj":"inclusion_criteria"},{"id":"A97123","pred":"ForZoonoses","subj":"T117","obj":"inclusion_criteria"},{"id":"A97056","pred":"tao:has_database_id","subj":"T115","obj":"MESH:D005293"},{"id":"A97127","pred":"ForZoonoses","subj":"T115","obj":"inclusion_criteria"},{"id":"A97110","pred":"ForZoonoses","subj":"T116","obj":"inclusion_criteria"},{"id":"A114","pred":"tao:has_database_id","subj":"114","obj":"Tax:9606"},{"id":"A97070","pred":"tao:has_database_id","subj":"T114","obj":"MESH:D007770"},{"id":"A97129","pred":"ForZoonoses","subj":"T114","obj":"inclusion_criteria"},{"subj":"114","pred":"source","obj":"Zoonoses"},{"subj":"115","pred":"source","obj":"Zoonoses"},{"subj":"116","pred":"source","obj":"Zoonoses"},{"subj":"117","pred":"source","obj":"Zoonoses"},{"subj":"T113","pred":"source","obj":"Zoonoses"},{"subj":"T114","pred":"source","obj":"Zoonoses"},{"subj":"T115","pred":"source","obj":"Zoonoses"},{"subj":"T116","pred":"source","obj":"Zoonoses"},{"subj":"T117","pred":"source","obj":"Zoonoses"},{"subj":"T214","pred":"source","obj":"Zoonoses"},{"subj":"T215","pred":"source","obj":"Zoonoses"},{"subj":"T45","pred":"source","obj":"Zoonoses"},{"subj":"T46","pred":"source","obj":"Zoonoses"},{"subj":"T99489","pred":"source","obj":"Zoonoses"},{"subj":"T99491","pred":"source","obj":"Zoonoses"},{"subj":"T99495","pred":"source","obj":"Zoonoses"},{"subj":"T99496","pred":"source","obj":"Zoonoses"}]},{"project":"Covid19_manual_annotation","denotations":[{"id":"114","span":{"begin":0,"end":8},"obj":"Species"},{"id":"115","span":{"begin":60,"end":64},"obj":"Gene"},{"id":"116","span":{"begin":211,"end":214},"obj":"Gene"},{"id":"117","span":{"begin":237,"end":248},"obj":"Disease"},{"id":"T113","span":{"begin":65,"end":75},"obj":"Value"},{"id":"T114","span":{"begin":216,"end":219},"obj":"Biological"},{"id":"T115","span":{"begin":221,"end":235},"obj":"Biological"},{"id":"T116","span":{"begin":144,"end":156},"obj":"Requirement"},{"id":"T117","span":{"begin":203,"end":209},"obj":"Duration"},{"id":"T214","span":{"begin":79,"end":86},"obj":"Index"},{"id":"T215","span":{"begin":119,"end":140},"obj":"BecomeSevere"},{"id":"T45","span":{"begin":87,"end":98},"obj":"Value"},{"id":"T46","span":{"begin":253,"end":260},"obj":"Index"}],"relations":[{"id":"R169","pred":"of_a","subj":"T113","obj":"115"},{"id":"R170","pred":"of_a","subj":"T45","obj":"T214"},{"id":"R171","pred":"in","subj":"T117","obj":"T116"},{"id":"R172","pred":"is_a","subj":"T215","obj":"116"},{"id":"R173","pred":"is_a","subj":"T215","obj":"T114"},{"id":"R174","pred":"is_a","subj":"T215","obj":"T115"},{"id":"R175","pred":"is_a","subj":"T215","obj":"117"},{"id":"R176","pred":"is_a","subj":"T215","obj":"T46"},{"id":"R177","pred":"with","subj":"116","obj":"T116"},{"id":"R178","pred":"with","subj":"T114","obj":"T116"},{"id":"R179","pred":"with","subj":"T115","obj":"T116"},{"id":"R180","pred":"with","subj":"117","obj":"T116"},{"id":"R181","pred":"with","subj":"T46","obj":"T116"}],"attributes":[{"id":"A239","pred":"ForCovid19","subj":"T116","obj":"trial criteria"},{"id":"A269","pred":"ForCovid19","subj":"T114","obj":"trial criteria"},{"id":"A238","pred":"ForCovid19","subj":"T45","obj":"trial criteria"},{"id":"A116","pred":"tao:has_database_id","subj":"116","obj":"Gene:1401"},{"id":"A268","pred":"ForCovid19","subj":"116","obj":"trial criteria"},{"id":"A270","pred":"ForCovid19","subj":"T115","obj":"trial criteria"},{"id":"A271","pred":"ForCovid19","subj":"T46","obj":"trial criteria"},{"id":"A97002","pred":"tao:has_database_id","subj":"T46","obj":"MESH:C036309"},{"id":"A117","pred":"tao:has_database_id","subj":"117","obj":"MESH:D008231"},{"id":"A272","pred":"ForCovid19","subj":"117","obj":"trial criteria"},{"id":"A240","pred":"ForCovid19","subj":"T117","obj":"trial criteria"},{"id":"A114","pred":"tao:has_database_id","subj":"114","obj":"Tax:9606"},{"id":"A237","pred":"ForCovid19","subj":"T113","obj":"trial criteria"},{"id":"A267","pred":"ForCovid19","subj":"T214","obj":"trial criteria"},{"id":"A97001","pred":"tao:has_database_id","subj":"T214","obj":"MESH:C036309"},{"id":"A115","pred":"tao:has_database_id","subj":"115","obj":"Gene:3569"},{"id":"A266","pred":"ForCovid19","subj":"115","obj":"trial criteria"},{"subj":"114","pred":"source","obj":"Covid19_manual_annotation"},{"subj":"115","pred":"source","obj":"Covid19_manual_annotation"},{"subj":"116","pred":"source","obj":"Covid19_manual_annotation"},{"subj":"117","pred":"source","obj":"Covid19_manual_annotation"},{"subj":"T113","pred":"source","obj":"Covid19_manual_annotation"},{"subj":"T114","pred":"source","obj":"Covid19_manual_annotation"},{"subj":"T115","pred":"source","obj":"Covid19_manual_annotation"},{"subj":"T116","pred":"source","obj":"Covid19_manual_annotation"},{"subj":"T117","pred":"source","obj":"Covid19_manual_annotation"},{"subj":"T214","pred":"source","obj":"Covid19_manual_annotation"},{"subj":"T215","pred":"source","obj":"Covid19_manual_annotation"},{"subj":"T45","pred":"source","obj":"Covid19_manual_annotation"},{"subj":"T46","pred":"source","obj":"Covid19_manual_annotation"}]},{"project":"Inflammaging","denotations":[{"id":"T17","span":{"begin":0,"end":261},"obj":"Sentence"},{"id":"T17","span":{"begin":0,"end":261},"obj":"Sentence"}],"attributes":[{"subj":"T17","pred":"source","obj":"Inflammaging"},{"subj":"T17","pred":"source","obj":"Inflammaging"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-UBERON","color":"#c093ec","default":true},{"id":"LitCovid-PD-FMA-UBERON","color":"#93eca6"},{"id":"LitCovid-PD-MONDO","color":"#ec939a"},{"id":"LitCovid-PD-CLO","color":"#93b4ec"},{"id":"LitCovid-PD-CHEBI","color":"#ceec93"},{"id":"LitCovid-sentences","color":"#ec93e8"},{"id":"LitCovid-PubTator","color":"#93ecd6"},{"id":"LitCovid-PD-HP","color":"#ecbc93"},{"id":"Covid19_manual_annotation_v2","color":"#a293ec"},{"id":"Zoonoses","color":"#9dec93"},{"id":"Covid19_manual_annotation","color":"#ec93b7"},{"id":"Inflammaging","color":"#93d1ec"}]}]}}