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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 164-168 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T2 408-417 Body_part denotes cytokines http://purl.org/sig/ont/fma/fma84050
T3 422-432 Body_part denotes chemokines http://purl.org/sig/ont/fma/fma241981
T4 632-645 Body_part denotes immune system http://purl.org/sig/ont/fma/fma9825
T5 800-808 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T6 998-1002 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 632-645 Body_part denotes immune system http://purl.obolibrary.org/obo/UBERON_0002405

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 0-8 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T2 130-138 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T3 249-257 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T4 260-269 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T5 816-828 Disease denotes inflammation http://purl.obolibrary.org/obo/MONDO_0021166
T6 906-914 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 45-50 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T2 164-168 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T3 348-357 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T4 490-495 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T5 517-522 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T6 523-526 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T7 607-617 http://purl.obolibrary.org/obo/CLO_0001658 denotes activation
T8 632-645 http://purl.obolibrary.org/obo/UBERON_0002405 denotes immune system
T9 798-799 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T10 998-1002 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 62-64 Chemical denotes II http://purl.obolibrary.org/obo/CHEBI_74067

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 66-81 http://purl.obolibrary.org/obo/GO_0045087 denotes Innate immunity
T2 275-297 http://purl.obolibrary.org/obo/GO_0045087 denotes innate immune response
T3 282-297 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response
T4 348-366 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathways
T5 348-357 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T6 453-477 http://purl.obolibrary.org/obo/GO_0002250 denotes adaptive immune response
T7 462-477 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response
T8 625-638 http://purl.obolibrary.org/obo/GO_0045087 denotes innate immune
T9 763-785 http://purl.obolibrary.org/obo/GO_0045087 denotes innate immune response
T10 770-785 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response
T11 816-828 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammation
T12 975-985 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-56 Sentence denotes SARS-CoV-2 multifaceted interaction with the human host.
T2 57-65 Sentence denotes Part II:
T3 66-125 Sentence denotes Innate immunity response, immunopathology, and epigenetics.
T4 126-229 Sentence denotes The SARS-CoV-2 makes its way into the cell via the ACE2 receptor and the proteolytic action of TMPRSS2.
T5 230-496 Sentence denotes In response to the SARS-CoV-2 infection, the innate immune response is the first line of defense, triggering multiple signaling pathways to produce interferons, pro-inflammatory cytokines and chemokines, and initiating the adaptive immune response against the virus.
T6 497-646 Sentence denotes Unsurprisingly, the virus has developed strategies to evade detection, which can result in delayed, excessive activation of the innate immune system.
T7 647-748 Sentence denotes The response elicited by the host depends on multiple factors, including health status, age, and sex.
T8 749-924 Sentence denotes An overactive innate immune response can lead to a cytokine storm, inflammation, and vascular disruption, leading to the vast array of symptoms exhibited by COVID-19 patients.
T9 925-1076 Sentence denotes What is known about the expression and epigenetic regulation of the ACE2 gene and the various players in the host response are explored in this review.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
2 0-10 Species denotes SARS-CoV-2 Tax:2697049
3 45-50 Species denotes human Tax:9606
11 130-140 Species denotes SARS-CoV-2 Tax:2697049
12 221-228 Gene denotes TMPRSS2 Gene:7113
13 249-269 Disease denotes SARS-CoV-2 infection MESH:C000657245
14 816-828 Disease denotes inflammation MESH:D007249
15 906-914 Disease denotes COVID-19 MESH:C000657245
16 915-923 Species denotes patients Tax:9606
17 993-997 Gene denotes ACE2 Gene:59272

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 800-814 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041

Inflammaging

Id Subject Object Predicate Lexical cue
T1 0-56 Sentence denotes SARS-CoV-2 multifaceted interaction with the human host.
T2 57-65 Sentence denotes Part II:
T3 66-125 Sentence denotes Innate immunity response, immunopathology, and epigenetics.
T4 126-229 Sentence denotes The SARS-CoV-2 makes its way into the cell via the ACE2 receptor and the proteolytic action of TMPRSS2.
T5 230-496 Sentence denotes In response to the SARS-CoV-2 infection, the innate immune response is the first line of defense, triggering multiple signaling pathways to produce interferons, pro-inflammatory cytokines and chemokines, and initiating the adaptive immune response against the virus.
T6 497-646 Sentence denotes Unsurprisingly, the virus has developed strategies to evade detection, which can result in delayed, excessive activation of the innate immune system.
T7 647-748 Sentence denotes The response elicited by the host depends on multiple factors, including health status, age, and sex.
T8 749-924 Sentence denotes An overactive innate immune response can lead to a cytokine storm, inflammation, and vascular disruption, leading to the vast array of symptoms exhibited by COVID-19 patients.
T9 925-1076 Sentence denotes What is known about the expression and epigenetic regulation of the ACE2 gene and the various players in the host response are explored in this review.
T1 0-56 Sentence denotes SARS-CoV-2 multifaceted interaction with the human host.
T2 57-65 Sentence denotes Part II:
T3 66-125 Sentence denotes Innate immunity response, immunopathology, and epigenetics.
T4 126-229 Sentence denotes The SARS-CoV-2 makes its way into the cell via the ACE2 receptor and the proteolytic action of TMPRSS2.
T5 230-496 Sentence denotes In response to the SARS-CoV-2 infection, the innate immune response is the first line of defense, triggering multiple signaling pathways to produce interferons, pro-inflammatory cytokines and chemokines, and initiating the adaptive immune response against the virus.
T6 497-646 Sentence denotes Unsurprisingly, the virus has developed strategies to evade detection, which can result in delayed, excessive activation of the innate immune system.
T7 647-748 Sentence denotes The response elicited by the host depends on multiple factors, including health status, age, and sex.
T8 749-924 Sentence denotes An overactive innate immune response can lead to a cytokine storm, inflammation, and vascular disruption, leading to the vast array of symptoms exhibited by COVID-19 patients.
T9 925-1076 Sentence denotes What is known about the expression and epigenetic regulation of the ACE2 gene and the various players in the host response are explored in this review.