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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 33-37 Body_part denotes Lung http://purl.org/sig/ont/fma/fma7195
T2 153-157 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T3 275-279 Body_part denotes Lung http://purl.org/sig/ont/fma/fma7195
T4 385-389 Body_part denotes Lung http://purl.org/sig/ont/fma/fma7195
T5 482-486 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T6 714-725 Body_part denotes right lungs http://purl.org/sig/ont/fma/fma7309
T7 720-725 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T8 933-937 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 33-37 Body_part denotes Lung http://purl.obolibrary.org/obo/UBERON_0002048
T2 153-157 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T3 275-279 Body_part denotes Lung http://purl.obolibrary.org/obo/UBERON_0002048
T4 385-389 Body_part denotes Lung http://purl.obolibrary.org/obo/UBERON_0002048
T5 429-434 Body_part denotes scale http://purl.obolibrary.org/obo/UBERON_0002542
T6 482-486 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T7 714-725 Body_part denotes right lungs http://purl.obolibrary.org/obo/UBERON_0002167
T8 933-937 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 52-60 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T2 61-70 Disease denotes Pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T3 209-217 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T4 219-228 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T5 331-339 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T6 340-349 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T7 494-496 Disease denotes LS http://purl.obolibrary.org/obo/MONDO_0009723
T8 658-660 Disease denotes LS http://purl.obolibrary.org/obo/MONDO_0009723
T9 823-825 Disease denotes LS http://purl.obolibrary.org/obo/MONDO_0009723
T10 987-989 Disease denotes LS http://purl.obolibrary.org/obo/MONDO_0009723
T11 1034-1036 Disease denotes LS http://purl.obolibrary.org/obo/MONDO_0009723
T12 1204-1206 Disease denotes LS http://purl.obolibrary.org/obo/MONDO_0009723
T13 1359-1361 Disease denotes LS http://purl.obolibrary.org/obo/MONDO_0009723
T14 1389-1391 Disease denotes LS http://purl.obolibrary.org/obo/MONDO_0009723
T15 1505-1513 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T16 1514-1523 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T17 1760-1762 Disease denotes LS http://purl.obolibrary.org/obo/MONDO_0009723

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 33-37 http://purl.obolibrary.org/obo/UBERON_0002048 denotes Lung
T2 33-37 http://www.ebi.ac.uk/efo/EFO_0000934 denotes Lung
T3 72-82 http://purl.obolibrary.org/obo/BFO_0000030 denotes OBJECTIVES
T4 88-91 http://purl.obolibrary.org/obo/PR_000001343 denotes aim
T5 153-157 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T6 153-157 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T7 275-279 http://purl.obolibrary.org/obo/UBERON_0002048 denotes Lung
T8 275-279 http://www.ebi.ac.uk/efo/EFO_0000934 denotes Lung
T9 362-363 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T10 385-389 http://purl.obolibrary.org/obo/UBERON_0002048 denotes Lung
T11 385-389 http://www.ebi.ac.uk/efo/EFO_0000934 denotes Lung
T12 419-420 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T13 440-441 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T14 480-481 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T15 482-486 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T16 482-486 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T17 714-725 http://purl.obolibrary.org/obo/UBERON_0002167 denotes right lungs
T18 787-796 http://purl.obolibrary.org/obo/UBERON_0001353 denotes posterior
T19 833-834 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T20 933-937 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T21 933-937 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T22 957-958 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T23 1148-1149 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T24 1381-1382 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T25 1586-1595 http://purl.obolibrary.org/obo/UBERON_0001353 denotes posterior
T26 1639-1642 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T27 1778-1781 http://purl.obolibrary.org/obo/CLO_0051582 denotes has

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 494-496 Chemical denotes LS http://purl.obolibrary.org/obo/CHEBI_73523
T2 634-636 Chemical denotes SD http://purl.obolibrary.org/obo/CHEBI_74807
T3 658-660 Chemical denotes LS http://purl.obolibrary.org/obo/CHEBI_73523
T4 823-825 Chemical denotes LS http://purl.obolibrary.org/obo/CHEBI_73523
T5 876-882 Chemical denotes oxygen http://purl.obolibrary.org/obo/CHEBI_25805
T6 916-922 Chemical denotes oxygen http://purl.obolibrary.org/obo/CHEBI_25805
T7 987-989 Chemical denotes LS http://purl.obolibrary.org/obo/CHEBI_73523
T8 1034-1036 Chemical denotes LS http://purl.obolibrary.org/obo/CHEBI_73523
T9 1204-1206 Chemical denotes LS http://purl.obolibrary.org/obo/CHEBI_73523
T10 1359-1361 Chemical denotes LS http://purl.obolibrary.org/obo/CHEBI_73523
T11 1389-1391 Chemical denotes LS http://purl.obolibrary.org/obo/CHEBI_73523
T12 1760-1762 Chemical denotes LS http://purl.obolibrary.org/obo/CHEBI_73523

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 61-70 Phenotype denotes Pneumonia http://purl.obolibrary.org/obo/HP_0002090
T2 219-228 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T3 340-349 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T4 1514-1523 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1 52-70 Disease denotes COVID-19 Pneumonia MESH:C000657245
13 177-185 Species denotes patients Tax:9606
14 191-207 Species denotes coronavirus 2019 Tax:2697049
15 209-217 Disease denotes COVID-19 MESH:C000657245
16 219-228 Disease denotes pneumonia MESH:D011014
17 317-325 Species denotes patients Tax:9606
18 331-349 Disease denotes COVID-19 pneumonia MESH:C000657245
19 576-584 Species denotes patients Tax:9606
20 876-882 Chemical denotes oxygen MESH:D010100
21 916-922 Chemical denotes oxygen MESH:D010100
22 1090-1098 Species denotes patients Tax:9606
23 1505-1523 Disease denotes COVID-19 pneumonia MESH:C000657245

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-71 Sentence denotes Findings and Prognostic Value of Lung Ultrasound in COVID-19 Pneumonia.
T2 72-83 Sentence denotes OBJECTIVES:
T3 84-265 Sentence denotes The aim of this study was to systematically describe the findings of lung ultrasound (US) in patients with coronavirus 2019 (COVID-19) pneumonia and to analyze its prognostic value.
T4 266-274 Sentence denotes METHODS:
T5 275-384 Sentence denotes Lung US examinations were performed in 63 patients with COVID-19 pneumonia admitted to a university hospital.
T6 385-498 Sentence denotes Lung involvement was evaluated on a 4-point scale with a 12-area pulmonary division, obtaining a lung score (LS).
T7 499-562 Sentence denotes Ultrasound findings and clinical characteristics were recorded.
T8 563-571 Sentence denotes RESULTS:
T9 572-647 Sentence denotes All patients showed US involvement in at least 1 area (mean ± SD, 8 ± 3.5).
T10 648-726 Sentence denotes The total LS was 15.3 ± 8.1, without differences between left and right lungs.
T11 727-812 Sentence denotes Most affected regions were the lower region (95.2%) and the posterior region (73.8%).
T12 813-1070 Sentence denotes The total LS showed a strong correlation (r = -0.765) with the oxygen pressure-to-fraction of inspired oxygen ratio; by lung region, those with a higher correlation were the LS of the anterior region (r = -0.823) and the LS of the upper region (r = -0.731).
T13 1071-1147 Sentence denotes In total, 22.2% of patients required noninvasive respiratory support (NIRS).
T14 1148-1339 Sentence denotes A multivariate analysis showed that the anterior region LS, adjusted for age and sex, was significant (odds ratio, 2.159; 95% confidence interval, 1.309-3.561) for the risk of requiring NIRS.
T15 1340-1465 Sentence denotes An anterior region LS of 4 or higher and a total LS of 19 or higher had similar characteristics to predict the need for NIRS.
T16 1466-1478 Sentence denotes CONCLUSIONS:
T17 1479-1555 Sentence denotes Ultrasound involvement in COVID-19 pneumonia is bilateral and heterogeneous.
T18 1556-1618 Sentence denotes Most affected regions are the posterior and the lower regions.
T19 1619-1848 Sentence denotes The anterior region has prognostic value because its involvement strongly correlates with the risk of requiring NIRS, and an anterior region LS of 4 or higher has high sensitivity and specificity for predicting the need for NIRS.