PubMed:32936491
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T1 | 33-37 | Body_part | denotes | Lung | http://purl.org/sig/ont/fma/fma7195 |
T2 | 153-157 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
T3 | 275-279 | Body_part | denotes | Lung | http://purl.org/sig/ont/fma/fma7195 |
T4 | 385-389 | Body_part | denotes | Lung | http://purl.org/sig/ont/fma/fma7195 |
T5 | 482-486 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
T6 | 714-725 | Body_part | denotes | right lungs | http://purl.org/sig/ont/fma/fma7309 |
T7 | 720-725 | Body_part | denotes | lungs | http://purl.org/sig/ont/fma/fma68877 |
T8 | 933-937 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T1 | 33-37 | Body_part | denotes | Lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
T2 | 153-157 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
T3 | 275-279 | Body_part | denotes | Lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
T4 | 385-389 | Body_part | denotes | Lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
T5 | 429-434 | Body_part | denotes | scale | http://purl.obolibrary.org/obo/UBERON_0002542 |
T6 | 482-486 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
T7 | 714-725 | Body_part | denotes | right lungs | http://purl.obolibrary.org/obo/UBERON_0002167 |
T8 | 933-937 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T1 | 52-60 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T2 | 61-70 | Disease | denotes | Pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
T3 | 209-217 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T4 | 219-228 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
T5 | 331-339 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T6 | 340-349 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
T7 | 494-496 | Disease | denotes | LS | http://purl.obolibrary.org/obo/MONDO_0009723 |
T8 | 658-660 | Disease | denotes | LS | http://purl.obolibrary.org/obo/MONDO_0009723 |
T9 | 823-825 | Disease | denotes | LS | http://purl.obolibrary.org/obo/MONDO_0009723 |
T10 | 987-989 | Disease | denotes | LS | http://purl.obolibrary.org/obo/MONDO_0009723 |
T11 | 1034-1036 | Disease | denotes | LS | http://purl.obolibrary.org/obo/MONDO_0009723 |
T12 | 1204-1206 | Disease | denotes | LS | http://purl.obolibrary.org/obo/MONDO_0009723 |
T13 | 1359-1361 | Disease | denotes | LS | http://purl.obolibrary.org/obo/MONDO_0009723 |
T14 | 1389-1391 | Disease | denotes | LS | http://purl.obolibrary.org/obo/MONDO_0009723 |
T15 | 1505-1513 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T16 | 1514-1523 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
T17 | 1760-1762 | Disease | denotes | LS | http://purl.obolibrary.org/obo/MONDO_0009723 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 33-37 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | Lung |
T2 | 33-37 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | Lung |
T3 | 72-82 | http://purl.obolibrary.org/obo/BFO_0000030 | denotes | OBJECTIVES |
T4 | 88-91 | http://purl.obolibrary.org/obo/PR_000001343 | denotes | aim |
T5 | 153-157 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
T6 | 153-157 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
T7 | 275-279 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | Lung |
T8 | 275-279 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | Lung |
T9 | 362-363 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T10 | 385-389 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | Lung |
T11 | 385-389 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | Lung |
T12 | 419-420 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T13 | 440-441 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T14 | 480-481 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T15 | 482-486 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
T16 | 482-486 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
T17 | 714-725 | http://purl.obolibrary.org/obo/UBERON_0002167 | denotes | right lungs |
T18 | 787-796 | http://purl.obolibrary.org/obo/UBERON_0001353 | denotes | posterior |
T19 | 833-834 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T20 | 933-937 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
T21 | 933-937 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
T22 | 957-958 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T23 | 1148-1149 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
T24 | 1381-1382 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T25 | 1586-1595 | http://purl.obolibrary.org/obo/UBERON_0001353 | denotes | posterior |
T26 | 1639-1642 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
T27 | 1778-1781 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T1 | 494-496 | Chemical | denotes | LS | http://purl.obolibrary.org/obo/CHEBI_73523 |
T2 | 634-636 | Chemical | denotes | SD | http://purl.obolibrary.org/obo/CHEBI_74807 |
T3 | 658-660 | Chemical | denotes | LS | http://purl.obolibrary.org/obo/CHEBI_73523 |
T4 | 823-825 | Chemical | denotes | LS | http://purl.obolibrary.org/obo/CHEBI_73523 |
T5 | 876-882 | Chemical | denotes | oxygen | http://purl.obolibrary.org/obo/CHEBI_25805 |
T6 | 916-922 | Chemical | denotes | oxygen | http://purl.obolibrary.org/obo/CHEBI_25805 |
T7 | 987-989 | Chemical | denotes | LS | http://purl.obolibrary.org/obo/CHEBI_73523 |
T8 | 1034-1036 | Chemical | denotes | LS | http://purl.obolibrary.org/obo/CHEBI_73523 |
T9 | 1204-1206 | Chemical | denotes | LS | http://purl.obolibrary.org/obo/CHEBI_73523 |
T10 | 1359-1361 | Chemical | denotes | LS | http://purl.obolibrary.org/obo/CHEBI_73523 |
T11 | 1389-1391 | Chemical | denotes | LS | http://purl.obolibrary.org/obo/CHEBI_73523 |
T12 | 1760-1762 | Chemical | denotes | LS | http://purl.obolibrary.org/obo/CHEBI_73523 |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T1 | 61-70 | Phenotype | denotes | Pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
T2 | 219-228 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
T3 | 340-349 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
T4 | 1514-1523 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
1 | 52-70 | Disease | denotes | COVID-19 Pneumonia | MESH:C000657245 |
13 | 177-185 | Species | denotes | patients | Tax:9606 |
14 | 191-207 | Species | denotes | coronavirus 2019 | Tax:2697049 |
15 | 209-217 | Disease | denotes | COVID-19 | MESH:C000657245 |
16 | 219-228 | Disease | denotes | pneumonia | MESH:D011014 |
17 | 317-325 | Species | denotes | patients | Tax:9606 |
18 | 331-349 | Disease | denotes | COVID-19 pneumonia | MESH:C000657245 |
19 | 576-584 | Species | denotes | patients | Tax:9606 |
20 | 876-882 | Chemical | denotes | oxygen | MESH:D010100 |
21 | 916-922 | Chemical | denotes | oxygen | MESH:D010100 |
22 | 1090-1098 | Species | denotes | patients | Tax:9606 |
23 | 1505-1523 | Disease | denotes | COVID-19 pneumonia | MESH:C000657245 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 0-71 | Sentence | denotes | Findings and Prognostic Value of Lung Ultrasound in COVID-19 Pneumonia. |
T2 | 72-83 | Sentence | denotes | OBJECTIVES: |
T3 | 84-265 | Sentence | denotes | The aim of this study was to systematically describe the findings of lung ultrasound (US) in patients with coronavirus 2019 (COVID-19) pneumonia and to analyze its prognostic value. |
T4 | 266-274 | Sentence | denotes | METHODS: |
T5 | 275-384 | Sentence | denotes | Lung US examinations were performed in 63 patients with COVID-19 pneumonia admitted to a university hospital. |
T6 | 385-498 | Sentence | denotes | Lung involvement was evaluated on a 4-point scale with a 12-area pulmonary division, obtaining a lung score (LS). |
T7 | 499-562 | Sentence | denotes | Ultrasound findings and clinical characteristics were recorded. |
T8 | 563-571 | Sentence | denotes | RESULTS: |
T9 | 572-647 | Sentence | denotes | All patients showed US involvement in at least 1 area (mean ± SD, 8 ± 3.5). |
T10 | 648-726 | Sentence | denotes | The total LS was 15.3 ± 8.1, without differences between left and right lungs. |
T11 | 727-812 | Sentence | denotes | Most affected regions were the lower region (95.2%) and the posterior region (73.8%). |
T12 | 813-1070 | Sentence | denotes | The total LS showed a strong correlation (r = -0.765) with the oxygen pressure-to-fraction of inspired oxygen ratio; by lung region, those with a higher correlation were the LS of the anterior region (r = -0.823) and the LS of the upper region (r = -0.731). |
T13 | 1071-1147 | Sentence | denotes | In total, 22.2% of patients required noninvasive respiratory support (NIRS). |
T14 | 1148-1339 | Sentence | denotes | A multivariate analysis showed that the anterior region LS, adjusted for age and sex, was significant (odds ratio, 2.159; 95% confidence interval, 1.309-3.561) for the risk of requiring NIRS. |
T15 | 1340-1465 | Sentence | denotes | An anterior region LS of 4 or higher and a total LS of 19 or higher had similar characteristics to predict the need for NIRS. |
T16 | 1466-1478 | Sentence | denotes | CONCLUSIONS: |
T17 | 1479-1555 | Sentence | denotes | Ultrasound involvement in COVID-19 pneumonia is bilateral and heterogeneous. |
T18 | 1556-1618 | Sentence | denotes | Most affected regions are the posterior and the lower regions. |
T19 | 1619-1848 | Sentence | denotes | The anterior region has prognostic value because its involvement strongly correlates with the risk of requiring NIRS, and an anterior region LS of 4 or higher has high sensitivity and specificity for predicting the need for NIRS. |