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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 631-644 Body_part denotes cranial nerve http://purl.org/sig/ont/fma/fma5865
T2 690-705 Body_part denotes lower extremity http://purl.org/sig/ont/fma/fma7184
T3 1020-1031 Body_part denotes Ganglioside http://purl.org/sig/ont/fma/fma82816
T4 1051-1067 Body_part denotes immunoglobulin G http://purl.org/sig/ont/fma/fma62872

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 631-644 Body_part denotes cranial nerve http://purl.obolibrary.org/obo/UBERON_0001785
T2 639-644 Body_part denotes nerve http://purl.obolibrary.org/obo/UBERON_0001021

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 41-55 Disease denotes Polyneuropathy http://purl.obolibrary.org/obo/MONDO_0001824
T2 85-93 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T3 111-158 Disease denotes Severe acute respiratory syndrome coronavirus 2 http://purl.obolibrary.org/obo/MONDO_0100096
T4 160-168 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T5 358-372 Disease denotes polyneuropathy http://purl.obolibrary.org/obo/MONDO_0001824
T6 389-411 Disease denotes Miller-Fisher Syndrome http://purl.obolibrary.org/obo/MONDO_0005851
T7 413-416 Disease denotes MFS http://purl.obolibrary.org/obo/MONDO_0007947|http://purl.obolibrary.org/obo/MONDO_0019202|http://purl.obolibrary.org/obo/MONDO_0005851
T10 418-452 Disease denotes variant of Guillain Barre Syndrome http://purl.obolibrary.org/obo/MONDO_0016493
T11 429-452 Disease denotes Guillain Barre Syndrome http://purl.obolibrary.org/obo/MONDO_0016218
T12 454-457 Disease denotes GBS http://purl.obolibrary.org/obo/MONDO_0016218|http://purl.obolibrary.org/obo/MONDO_0016493
T14 671-677 Disease denotes ataxia http://purl.obolibrary.org/obo/MONDO_0000437
T15 746-756 Disease denotes infectious http://purl.obolibrary.org/obo/MONDO_0005550
T16 844-852 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T17 950-958 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T18 1092-1114 Disease denotes Miller Fisher syndrome http://purl.obolibrary.org/obo/MONDO_0005851
T19 1116-1119 Disease denotes MFS http://purl.obolibrary.org/obo/MONDO_0007947|http://purl.obolibrary.org/obo/MONDO_0019202|http://purl.obolibrary.org/obo/MONDO_0005851
T22 1126-1160 Disease denotes variant of Guillain-Barre syndrome http://purl.obolibrary.org/obo/MONDO_0016493
T23 1137-1160 Disease denotes Guillain-Barre syndrome http://purl.obolibrary.org/obo/MONDO_0016218
T24 1162-1165 Disease denotes GBS http://purl.obolibrary.org/obo/MONDO_0016218|http://purl.obolibrary.org/obo/MONDO_0016493
T26 1195-1210 Disease denotes ophthalmoplegia http://purl.obolibrary.org/obo/MONDO_0003425
T27 1212-1218 Disease denotes ataxia http://purl.obolibrary.org/obo/MONDO_0000437
T28 1304-1307 Disease denotes MFS http://purl.obolibrary.org/obo/MONDO_0007947|http://purl.obolibrary.org/obo/MONDO_0019202|http://purl.obolibrary.org/obo/MONDO_0005851
T31 1321-1329 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T32 1332-1341 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 0-1 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T2 321-322 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T3 496-497 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T4 527-531 http://purl.obolibrary.org/obo/UBERON_0003101 denotes male
T5 527-531 http://www.ebi.ac.uk/efo/EFO_0000970 denotes male
T6 639-644 http://purl.obolibrary.org/obo/UBERON_0001021 denotes nerve
T7 696-705 http://www.ebi.ac.uk/efo/EFO_0000876 denotes extremity
T8 811-822 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing was
T9 882-883 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T10 939-940 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T11 987-994 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test as
T12 1124-1125 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T13 1184-1185 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 527-531 Chemical denotes male http://purl.obolibrary.org/obo/CHEBI_30780
T2 1020-1031 Chemical denotes Ganglioside http://purl.obolibrary.org/obo/CHEBI_28892
T3 1034-1038 Chemical denotes GQ1b http://purl.obolibrary.org/obo/CHEBI_27515
T4 1045-1049 Chemical denotes GQ1b http://purl.obolibrary.org/obo/CHEBI_27515
T5 1280-1284 Chemical denotes GQ1b http://purl.obolibrary.org/obo/CHEBI_27515

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-96 Sentence denotes A Case Report of Acute Motor and Sensory Polyneuropathy as the Presenting Symptom of SARS-CoV-2.
T2 97-110 Sentence denotes INTRODUCTION:
T3 111-310 Sentence denotes Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) typically presents with respiratory illness and fever, however some rare neurologic symptoms have been described as presenting complaints.
T4 311-482 Sentence denotes We report a case of an acute motor and sensory polyneuropathy consistent with Miller-Fisher Syndrome (MFS) variant of Guillain Barre Syndrome (GBS) as the initial symptom.
T5 483-495 Sentence denotes CASE REPORT:
T6 496-614 Sentence denotes A 31-year old Spanish speaking male presents with two months of progressive weakness, numbness, and difficult walking.
T7 615-715 Sentence denotes He had multiple cranial nerve abnormalities, dysmetria, ataxia, and absent lower extremity reflexes.
T8 716-833 Sentence denotes An extensive workup including infectious, autoimmune, paraneoplastic, metabolic and neurologic testing was performed.
T9 834-913 Sentence denotes Initially SARS-CoV-2 was not suspected based on a lack of respiratory symptoms.
T10 914-1079 Sentence denotes However, workup revealed a positive SARS-CoV-2 polymerase chain reaction test as well as presence of Anti-Ganglioside - GQ1b (Anti-GQ1b) immunoglobulin G antibodies.
T11 1080-1091 Sentence denotes DISCUSSION:
T12 1092-1234 Sentence denotes Miller Fisher syndrome (MFS) is a variant of Guillain-Barre syndrome (GBS) characterized by a triad of ophthalmoplegia, ataxia, and areflexia.
T13 1235-1308 Sentence denotes The patient's exam and workup including Anti-GQ1b is consistent with MFS.
T14 1309-1426 Sentence denotes CONCLUSION: SARS-CoV-2 infection in patients can have atypical presentations similar to this neurologic presentation.
T15 1427-1555 Sentence denotes Prompt recognition and diagnosis can minimize the risk of transmission to hospital staff and facilitate initiation of treatment.

LitCovid-PD-GlycoEpitope

Id Subject Object Predicate Lexical cue glyco_epitope_db_id
T1 1034-1038 GlycoEpitope denotes GQ1b http://www.glycoepitope.jp/epitopes/EP0069
T2 1045-1049 GlycoEpitope denotes GQ1b http://www.glycoepitope.jp/epitopes/EP0069
T3 1280-1284 GlycoEpitope denotes GQ1b http://www.glycoepitope.jp/epitopes/EP0069

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
2 41-55 Disease denotes Polyneuropathy MESH:D011115
3 85-95 Species denotes SARS-CoV-2 Tax:2697049
32 111-158 Species denotes Severe acute respiratory syndrome coronavirus 2 Tax:2697049
33 160-170 Species denotes SARS-CoV-2 Tax:2697049
34 196-215 Disease denotes respiratory illness MESH:D012140
35 220-225 Disease denotes fever MESH:D005334
36 245-264 Disease denotes neurologic symptoms MESH:D009422
37 350-372 Disease denotes sensory polyneuropathy MESH:D011115
38 389-411 Disease denotes Miller-Fisher Syndrome MESH:D019846
39 413-416 Disease denotes MFS MESH:D008382
40 454-457 Disease denotes GBS MESH:D020275
41 572-580 Disease denotes weakness MESH:D018908
42 582-590 Disease denotes numbness MESH:D006987
43 622-658 Disease denotes multiple cranial nerve abnormalities MESH:D003389
44 660-669 Disease denotes dysmetria MESH:D002524
45 671-677 Disease denotes ataxia MESH:D001259
46 770-784 Disease denotes paraneoplastic MESH:D010257
47 844-854 Species denotes SARS-CoV-2 Tax:2697049
48 892-912 Disease denotes respiratory symptoms MESH:D012818
49 950-960 Species denotes SARS-CoV-2 Tax:2697049
50 1020-1031 Chemical denotes Ganglioside MESH:D005732
51 1116-1119 Disease denotes MFS MESH:D008382
52 1162-1165 Disease denotes GBS MESH:D020275
53 1195-1210 Disease denotes ophthalmoplegia MESH:D009886
54 1212-1218 Disease denotes ataxia MESH:D001259
55 1224-1233 Disease denotes areflexia MESH:D000071699
56 1239-1246 Species denotes patient Tax:9606
57 1304-1307 Disease denotes MFS MESH:D008382
58 1326-1341 Disease denotes CoV-2 infection MESH:C000657245
59 1345-1353 Species denotes patients Tax:9606

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 41-55 Phenotype denotes Polyneuropathy http://purl.obolibrary.org/obo/HP_0001271
T2 196-215 Phenotype denotes respiratory illness http://purl.obolibrary.org/obo/HP_0002086
T3 220-225 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T4 358-372 Phenotype denotes polyneuropathy http://purl.obolibrary.org/obo/HP_0001271
T5 631-658 Phenotype denotes cranial nerve abnormalities http://purl.obolibrary.org/obo/HP_0001291
T6 660-669 Phenotype denotes dysmetria http://purl.obolibrary.org/obo/HP_0001310
T7 671-677 Phenotype denotes ataxia http://purl.obolibrary.org/obo/HP_0001251
T8 1195-1210 Phenotype denotes ophthalmoplegia http://purl.obolibrary.org/obo/HP_0000602
T9 1212-1218 Phenotype denotes ataxia http://purl.obolibrary.org/obo/HP_0001251
T10 1224-1233 Phenotype denotes areflexia http://purl.obolibrary.org/obo/HP_0001284