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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 1845-1850 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T2 1851-1862 Body_part denotes body fluids http://purl.org/sig/ont/fma/fma280556
T3 1851-1855 Body_part denotes body http://purl.org/sig/ont/fma/fma256135
T4 3619-3629 Body_part denotes intestinal http://purl.org/sig/ont/fma/fma7199

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 1845-1850 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 34-42 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T2 45-54 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T3 88-96 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T4 184-193 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T5 245-253 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T6 330-338 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T7 362-370 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T8 630-639 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T9 1016-1024 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T10 1235-1243 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T11 1246-1254 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T12 1399-1407 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T13 1488-1496 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T14 1547-1555 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T15 1625-1634 Disease denotes Influenza http://purl.obolibrary.org/obo/MONDO_0005812
T16 2336-2344 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T17 2554-2562 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T18 2610-2618 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T19 2826-2834 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T20 3016-3024 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T21 3138-3141 Disease denotes flu http://purl.obolibrary.org/obo/MONDO_0005812
T22 3353-3361 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T23 3396-3405 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T24 3562-3570 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T25 3657-3667 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T26 3802-3810 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T27 4016-4024 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T28 4153-4161 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 118-121 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T2 436-437 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T3 675-676 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T4 789-790 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T5 1209-1210 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T6 1690-1691 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T7 1845-1850 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T8 1845-1850 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T9 1851-1862 http://purl.obolibrary.org/obo/UBERON_0006314 denotes body fluids
T10 2089-2090 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T11 2300-2301 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T12 2379-2380 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T13 2936-2937 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T14 3078-3079 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T15 3127-3128 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T16 3207-3208 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T17 3319-3326 http://purl.obolibrary.org/obo/UBERON_0001005 denotes airways
T18 3619-3629 http://purl.obolibrary.org/obo/UBERON_0000160 denotes intestinal
T19 3619-3629 http://www.ebi.ac.uk/efo/EFO_0000834 denotes intestinal
T20 3886-3887 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 1817-1822 Chemical denotes water http://purl.obolibrary.org/obo/CHEBI_15377
T2 3470-3474 Chemical denotes base http://purl.obolibrary.org/obo/CHEBI_22695

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 184-193 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T2 1654-1659 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T3 1661-1666 Phenotype denotes cough http://purl.obolibrary.org/obo/HP_0012735
T4 1668-1676 Phenotype denotes headache http://purl.obolibrary.org/obo/HP_0002315

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-106 Sentence denotes Inappropriate risk perception for SARS-CoV-2 infection among Italian HCWs in the eve of COVID-19 pandemic.
T2 107-262 Sentence denotes Sir, Italy has been recently involved in the outbreak of severe interstitial pneumonia associated with the previously unknown Coronavirus SARS-CoV-2 (1,2).
T3 263-500 Sentence denotes Even before the notification of the first autochthonous cases, the SARS-CoV-2 associated syndrome (COVID-19) had raised an intense attention in the public opinion (3), with a counterproductive over-abundance of mixed quality information.
T4 501-905 Sentence denotes As even Italian healthcare workers (HCWs) were not spared by subsequent misunderstandings and knowledge gaps during the previous influenza pandemic of 2009 (4), we performed a web-based survey (Google® Modules), specifically aimed to characterize knowledge status and risk perceptions in a sample from participating to 6 Facebook discussion groups (181,684 total unique members at the time of the study).
T5 906-1163 Sentence denotes The questionnaire was made available between February 1st and 7th, 2020, i.e. around 2 weeks before the first COVID-19 was officially diagnosed in Italian residents.   Overall, the sampled population included 2106 respondents (Table 1), and 39.3% were HCWs.
T6 1164-1408 Sentence denotes Even though HCWs were more likely to exhibit a better understanding of SARS-CoV-2/COVID-19 related issues (aOR 2.195, 95%CI 1.809 to 2.664), they were not exempt for misunderstandings, particularly on actual incidence and lethality of COVID-19.
T7 1409-1986 Sentence denotes Interestingly, most of respondents were aware of the main clinical features of COVID-19, with HCWs more frequently acknowledging that the COVID-19 may run pauci- or even asymptomatic (86.3% vs. 79.1%), resembling an Influenza-Like Illness (i.e. fever, cough, headache, etc.), with a potential latency up to 14 days (85·9% vs· 80·3%), eventually spreading by droplets (98.5% vs. 92.7%) rather through running water (92.3% vs· 79.8%), or blood/body fluids (88.0% vs. 70.4%).   Retrospectively, the assessment of preventive measures and risk perception appears somewhat worrisome.
T8 1987-2316 Sentence denotes For instance, while HCWs were more likely to acknowledge as an appropriate preventive measure wearing a filtering mask (i.e. N95/FFP2/3 mask; aOR 2.296, 95%CI 1.507 to 3.946), around ¼ of HCWs failed to recognize the importance of such personal protective equipment, while 7.4% felt as appropriate the wearing of a surgical mask.
T9 2317-2574 Sentence denotes Moreover, not only COVID-19 was appropriately acknowledged as a severe disease by only 62.0% of respondents, with no differences between HCWs and non-HCWs, but an even smaller share (i.e. 8.0%) reported any concern for being infected by SARS-CoV-2 in Italy.
T10 2575-2757 Sentence denotes In fact, at the time of the survey SARS-CoV-2 was more properly associated with international travelers (26.7%).   Our results are therefore of certain interests for several reasons.
T11 2758-2912 Sentence denotes First at all, early epidemiological reports on the Italian cases of COVID-19 hint towards some failures in the initial management of incident cases (5-6).
T12 2913-3189 Sentence denotes In fact, in our survey a large share of respondents substantially overlooked the risk to interact with SARS-CoV-2 positive subjects, that was otherwise perceived as a not-so-severe disease (i.e. "nothing more than a seasonal flu", as often described in some social media) (7).
T13 3190-3455 Sentence denotes Moreover, around a 1/3 of HCWs participating to the study presumptively did not use proper personal protective equipment for the airways interacting with possible COVID-19 cases, either underestimating the infection risk or being unable to recognize early symptoms.
T14 3456-3645 Sentence denotes Actually, the base of evidence shared by participants at the time of the study substantially ignored that COVID-19 may be characterized by dermatologic and gastro-intestinal symptoms (8-9).
T15 3646-4087 Sentence denotes As most of infections may be actually pauci- or asymptomatic, such early exposure in the healthcare settings may have contributed to the quick spreading of SARS-CoV-2 epidemic in Northern Italy.   Therefore, despite the intrinsic limits of a convenience sampling, web-based survey (10), our study stresses the importance to improve the overall quality of information on COVID-19 conveyed not only in HCWs, but also in the general population.
T16 4088-4182 Sentence denotes Moreover, our data may contribute to clarify the early stages of SARS-CoV-2 pandemic in Italy.