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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 51-63 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T2 287-299 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T3 396-408 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T4 450-463 Body_part denotes cell surfaces http://purl.org/sig/ont/fma/fma67653
T5 450-454 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 34-42 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T2 111-119 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T3 151-159 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T4 323-332 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 171-172 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T2 204-209 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T3 444-454 http://purl.obolibrary.org/obo/CLO_0053065 denotes human cell
T4 771-772 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 51-63 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089
T2 287-299 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089
T3 396-408 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089
T4 409-420 Chemical denotes angiotensin http://purl.obolibrary.org/obo/CHEBI_48433
T5 695-704 Chemical denotes N-glycans http://purl.obolibrary.org/obo/CHEBI_59520
T6 697-704 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T7 730-738 Chemical denotes LacdiNAc http://purl.obolibrary.org/obo/CHEBI_61190

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 601-614 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T2 788-803 http://purl.obolibrary.org/obo/GO_0006493 denotes O-glycosylation
T3 790-803 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-88 Sentence denotes Site-specific characterisation of SARS-CoV-2 spike glycoprotein receptor binding domain.
T2 89-255 Sentence denotes The novel coronavirus SARS-CoV-2, the infective agent causing COVID-19, is having a global impact both in terms of human disease as well as socially and economically.
T3 256-464 Sentence denotes Its heavily glycosylated spike glycoprotein is fundamental for the infection process, via its receptor binding domains interaction with the glycoprotein angiotensin converting enzyme 2 on human cell surfaces.
T4 465-650 Sentence denotes We therefore utilized an integrated glycomic and glycoproteomic analytical strategy to characterise both N- and O- glycan site specific glycosylation within the receptor binding domain.
T5 651-812 Sentence denotes We demonstrate the presence of complex type N-glycans with unusual fucosylated LacdiNAc at both sites N331 and N343 and a single site of O-glycosylation on T323.

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 730-738 Glycan_Motif denotes LacdiNAc https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G31736BK|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00057MO

sentences

Id Subject Object Predicate Lexical cue
T1 0-88 Sentence denotes Site-specific characterisation of SARS-CoV-2 spike glycoprotein receptor binding domain.
T2 89-255 Sentence denotes The novel coronavirus SARS-CoV-2, the infective agent causing COVID-19, is having a global impact both in terms of human disease as well as socially and economically.
T3 256-464 Sentence denotes Its heavily glycosylated spike glycoprotein is fundamental for the infection process, via its receptor binding domains interaction with the glycoprotein angiotensin converting enzyme 2 on human cell surfaces.
T4 465-650 Sentence denotes We therefore utilized an integrated glycomic and glycoproteomic analytical strategy to characterise both N- and O- glycan site specific glycosylation within the receptor binding domain.
T5 651-812 Sentence denotes We demonstrate the presence of complex type N-glycans with unusual fucosylated LacdiNAc at both sites N331 and N343 and a single site of O-glycosylation on T323.
T1 0-88 Sentence denotes Site-specific characterisation of SARS-CoV-2 spike glycoprotein receptor binding domain.
T2 89-255 Sentence denotes The novel coronavirus SARS-CoV-2, the infective agent causing COVID-19, is having a global impact both in terms of human disease as well as socially and economically.
T3 256-464 Sentence denotes Its heavily glycosylated spike glycoprotein is fundamental for the infection process, via its receptor binding domains interaction with the glycoprotein angiotensin converting enzyme 2 on human cell surfaces.
T4 465-650 Sentence denotes We therefore utilized an integrated glycomic and glycoproteomic analytical strategy to characterise both N- and O- glycan site specific glycosylation within the receptor binding domain.
T5 651-812 Sentence denotes We demonstrate the presence of complex type N-glycans with unusual fucosylated LacdiNAc at both sites N331 and N343 and a single site of O-glycosylation on T323.

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 730-738 https://glytoucan.org/Structures/Glycans/G00057MO denotes LacdiNAc
T2 730-738 https://glytoucan.org/Structures/Glycans/G31736BK denotes LacdiNAc

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 34-44 Disease denotes SARS-CoV-2 http://purl.obolibrary.org/obo/MONDO_0100096
T2 111-121 Disease denotes SARS-CoV-2 http://purl.obolibrary.org/obo/MONDO_0100096
T3 151-159 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T4 323-332 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 34-42 OrganismTaxon denotes SARS-CoV 694009
T2 111-119 OrganismTaxon denotes SARS-CoV 694009
T3 204-209 OrganismTaxon denotes human 9606
T4 444-449 OrganismTaxon denotes human 9606