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LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 66-74 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T2 125-133 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T3 273-281 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T4 368-376 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T5 1000-1006 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T6 1031-1037 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T7 1430-1438 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T8 1546-1554 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T9 1572-1580 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T10 1702-1710 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 168-169 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T2 191-193 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T3 261-262 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T4 289-299 http://purl.obolibrary.org/obo/BFO_0000030 denotes OBJECTIVES
T5 760-761 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T6 1159-1160 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T7 1555-1562 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T8 1711-1714 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T9 1784-1785 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 158-160 Chemical denotes SA http://purl.obolibrary.org/obo/CHEBI_35962|http://purl.obolibrary.org/obo/CHEBI_38358|http://purl.obolibrary.org/obo/CHEBI_45373|http://purl.obolibrary.org/obo/CHEBI_74801
T5 322-324 Chemical denotes SA http://purl.obolibrary.org/obo/CHEBI_35962|http://purl.obolibrary.org/obo/CHEBI_38358|http://purl.obolibrary.org/obo/CHEBI_45373|http://purl.obolibrary.org/obo/CHEBI_74801
T9 451-453 Chemical denotes SA http://purl.obolibrary.org/obo/CHEBI_35962|http://purl.obolibrary.org/obo/CHEBI_38358|http://purl.obolibrary.org/obo/CHEBI_45373|http://purl.obolibrary.org/obo/CHEBI_74801
T13 960-966 Chemical denotes Access http://purl.obolibrary.org/obo/CHEBI_34922
T14 1758-1760 Chemical denotes SA http://purl.obolibrary.org/obo/CHEBI_35962|http://purl.obolibrary.org/obo/CHEBI_38358|http://purl.obolibrary.org/obo/CHEBI_45373|http://purl.obolibrary.org/obo/CHEBI_74801

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 1000-1006 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T2 1031-1037 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1 66-74 Disease denotes COVID-19 MESH:C000657245
13 125-133 Disease denotes COVID-19 MESH:C000657245
14 273-281 Disease denotes COVID-19 MESH:C000657245
15 368-376 Disease denotes COVID-19 MESH:C000657245
16 1000-1006 Disease denotes cancer MESH:D009369
17 1031-1037 Disease denotes cancer MESH:D009369
18 1356-1366 Species denotes outpatient Tax:9606
19 1430-1438 Disease denotes COVID-19 MESH:C000657245
20 1546-1554 Disease denotes COVID-19 MESH:C000657245
21 1572-1580 Disease denotes COVID-19 MESH:C000657245
22 1702-1710 Disease denotes COVID-19 MESH:C000657245
23 1843-1852 Disease denotes mortality MESH:D003643

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-89 Sentence denotes Changes in surgical practice in 85 South African hospitals during COVID-19 hard lockdown.
T2 90-101 Sentence denotes BACKGROUND:
T3 102-288 Sentence denotes In preparation for the COVID-19 pandemic, South Africa (SA) began a national lockdown on 27 March 2020, and many hospitals implemented measures to prepare for a potential COVID-19 surge.
T4 289-300 Sentence denotes OBJECTIVES:
T5 301-390 Sentence denotes To report changes in SA hospital surgical practices in response to COVID-19 preparedness.
T6 391-399 Sentence denotes METHODS:
T7 400-543 Sentence denotes In this cross-sectional study, surgeons working in SA hospitals were recruited through surgical professional associations via an online survey.
T8 544-750 Sentence denotes The main outcome measures were changes in hospital practice around surgical decision-making, operating theatres, surgical services and surgical trainees, and the potential long-term effect of these changes.
T9 751-759 Sentence denotes RESULTS:
T10 760-865 Sentence denotes A total of 133 surgeons from 85 hospitals representing public and private hospitals nationwide responded.
T11 866-959 Sentence denotes In 59 hospitals (69.4%), surgeons were involved in the decision to de-escalate surgical care.
T12 960-1190 Sentence denotes Access was cancelled or reduced for non-cancer elective (n=84; 99.0%), cancer (n=24; 28.1%) and emergency operations (n=46; 54.1%), and 26 hospitals (30.6%) repurposed at least one operating room as a ventilated critical care bed.
T13 1191-1641 Sentence denotes Routine postoperative visits were cancelled in 33 hospitals (36.5%) and conducted by telephone or video in 15 (16.6%), 74 hospitals (87.1%) cancelled or reduced new outpatient visits, 64 (75.3%) reallocated some surgical inpatient beds to COVID-19 cases, and 29 (34.1%) deployed some surgical staff (including trainees) to other hospital services such as COVID-19 testing, medical/COVID-19 wards, the emergency department and the intensive care unit.
T14 1642-1654 Sentence denotes CONCLUSIONS:
T15 1655-1853 Sentence denotes Hospital surgical de-escalation in response to COVID-19 has greatly reduced access to surgical care in SA, which could result in a backlog of surgical needs and an excess of morbidity and mortality.