PubMed:32880278
Annnotations
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T1 | 66-74 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T2 | 125-133 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T3 | 273-281 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T4 | 368-376 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T5 | 1000-1006 | Disease | denotes | cancer | http://purl.obolibrary.org/obo/MONDO_0004992 |
T6 | 1031-1037 | Disease | denotes | cancer | http://purl.obolibrary.org/obo/MONDO_0004992 |
T7 | 1430-1438 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T8 | 1546-1554 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T9 | 1572-1580 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T10 | 1702-1710 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 168-169 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T2 | 191-193 | http://purl.obolibrary.org/obo/CLO_0050509 | denotes | 27 |
T3 | 261-262 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T4 | 289-299 | http://purl.obolibrary.org/obo/BFO_0000030 | denotes | OBJECTIVES |
T5 | 760-761 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
T6 | 1159-1160 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T7 | 1555-1562 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | testing |
T8 | 1711-1714 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
T9 | 1784-1785 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T1 | 158-160 | Chemical | denotes | SA | http://purl.obolibrary.org/obo/CHEBI_35962|http://purl.obolibrary.org/obo/CHEBI_38358|http://purl.obolibrary.org/obo/CHEBI_45373|http://purl.obolibrary.org/obo/CHEBI_74801 |
T5 | 322-324 | Chemical | denotes | SA | http://purl.obolibrary.org/obo/CHEBI_35962|http://purl.obolibrary.org/obo/CHEBI_38358|http://purl.obolibrary.org/obo/CHEBI_45373|http://purl.obolibrary.org/obo/CHEBI_74801 |
T9 | 451-453 | Chemical | denotes | SA | http://purl.obolibrary.org/obo/CHEBI_35962|http://purl.obolibrary.org/obo/CHEBI_38358|http://purl.obolibrary.org/obo/CHEBI_45373|http://purl.obolibrary.org/obo/CHEBI_74801 |
T13 | 960-966 | Chemical | denotes | Access | http://purl.obolibrary.org/obo/CHEBI_34922 |
T14 | 1758-1760 | Chemical | denotes | SA | http://purl.obolibrary.org/obo/CHEBI_35962|http://purl.obolibrary.org/obo/CHEBI_38358|http://purl.obolibrary.org/obo/CHEBI_45373|http://purl.obolibrary.org/obo/CHEBI_74801 |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T1 | 1000-1006 | Phenotype | denotes | cancer | http://purl.obolibrary.org/obo/HP_0002664 |
T2 | 1031-1037 | Phenotype | denotes | cancer | http://purl.obolibrary.org/obo/HP_0002664 |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
1 | 66-74 | Disease | denotes | COVID-19 | MESH:C000657245 |
13 | 125-133 | Disease | denotes | COVID-19 | MESH:C000657245 |
14 | 273-281 | Disease | denotes | COVID-19 | MESH:C000657245 |
15 | 368-376 | Disease | denotes | COVID-19 | MESH:C000657245 |
16 | 1000-1006 | Disease | denotes | cancer | MESH:D009369 |
17 | 1031-1037 | Disease | denotes | cancer | MESH:D009369 |
18 | 1356-1366 | Species | denotes | outpatient | Tax:9606 |
19 | 1430-1438 | Disease | denotes | COVID-19 | MESH:C000657245 |
20 | 1546-1554 | Disease | denotes | COVID-19 | MESH:C000657245 |
21 | 1572-1580 | Disease | denotes | COVID-19 | MESH:C000657245 |
22 | 1702-1710 | Disease | denotes | COVID-19 | MESH:C000657245 |
23 | 1843-1852 | Disease | denotes | mortality | MESH:D003643 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 0-89 | Sentence | denotes | Changes in surgical practice in 85 South African hospitals during COVID-19 hard lockdown. |
T2 | 90-101 | Sentence | denotes | BACKGROUND: |
T3 | 102-288 | Sentence | denotes | In preparation for the COVID-19 pandemic, South Africa (SA) began a national lockdown on 27 March 2020, and many hospitals implemented measures to prepare for a potential COVID-19 surge. |
T4 | 289-300 | Sentence | denotes | OBJECTIVES: |
T5 | 301-390 | Sentence | denotes | To report changes in SA hospital surgical practices in response to COVID-19 preparedness. |
T6 | 391-399 | Sentence | denotes | METHODS: |
T7 | 400-543 | Sentence | denotes | In this cross-sectional study, surgeons working in SA hospitals were recruited through surgical professional associations via an online survey. |
T8 | 544-750 | Sentence | denotes | The main outcome measures were changes in hospital practice around surgical decision-making, operating theatres, surgical services and surgical trainees, and the potential long-term effect of these changes. |
T9 | 751-759 | Sentence | denotes | RESULTS: |
T10 | 760-865 | Sentence | denotes | A total of 133 surgeons from 85 hospitals representing public and private hospitals nationwide responded. |
T11 | 866-959 | Sentence | denotes | In 59 hospitals (69.4%), surgeons were involved in the decision to de-escalate surgical care. |
T12 | 960-1190 | Sentence | denotes | Access was cancelled or reduced for non-cancer elective (n=84; 99.0%), cancer (n=24; 28.1%) and emergency operations (n=46; 54.1%), and 26 hospitals (30.6%) repurposed at least one operating room as a ventilated critical care bed. |
T13 | 1191-1641 | Sentence | denotes | Routine postoperative visits were cancelled in 33 hospitals (36.5%) and conducted by telephone or video in 15 (16.6%), 74 hospitals (87.1%) cancelled or reduced new outpatient visits, 64 (75.3%) reallocated some surgical inpatient beds to COVID-19 cases, and 29 (34.1%) deployed some surgical staff (including trainees) to other hospital services such as COVID-19 testing, medical/COVID-19 wards, the emergency department and the intensive care unit. |
T14 | 1642-1654 | Sentence | denotes | CONCLUSIONS: |
T15 | 1655-1853 | Sentence | denotes | Hospital surgical de-escalation in response to COVID-19 has greatly reduced access to surgical care in SA, which could result in a backlog of surgical needs and an excess of morbidity and mortality. |