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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 922-938 Body_part denotes ribonucleic acid http://purl.org/sig/ont/fma/fma67095
T2 940-943 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 30-38 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T2 67-114 Disease denotes severe acute respiratory syndrome coronavirus 2 http://purl.obolibrary.org/obo/MONDO_0100096
T3 67-100 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T4 116-124 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T5 491-499 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T6 603-611 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T7 1198-1206 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T8 1365-1373 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T9 1633-1641 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 181-184 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T2 672-676 http://purl.obolibrary.org/obo/CLO_0008416 denotes peer
T3 672-676 http://purl.obolibrary.org/obo/CLO_0050081 denotes peer
T4 915-920 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T5 1034-1037 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T6 1161-1166 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tests
T7 1190-1197 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T8 1302-1307 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tests
T9 1457-1458 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T10 1542-1549 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T11 1709-1714 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tests

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 922-938 Chemical denotes ribonucleic acid http://purl.obolibrary.org/obo/CHEBI_33697
T2 934-938 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T3 940-943 Chemical denotes RNA http://purl.obolibrary.org/obo/CHEBI_33697

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 881-902 http://purl.obolibrary.org/obo/GO_0001171 denotes reverse transcription
T2 889-902 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T3 904-906 http://purl.obolibrary.org/obo/GO_0001171 denotes RT
T4 1004-1006 http://purl.obolibrary.org/obo/GO_0001171 denotes RT

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-39 Sentence denotes Navigating the Diagnostics of COVID-19.
T2 40-222 Sentence denotes The recent outbreak of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) began in Hubei province, China, in December 2019 and has spread worldwide at an alarming rate.
T3 223-392 Sentence denotes With over eight million individuals infected and exceeding 400,000 deaths globally, the necessity to develop fast and efficient diagnostic methods is of high importance.
T4 393-621 Sentence denotes This paper reports on currently available diagnostic screening methods for patients infected with SARS-CoV-2 to guide frontline healthcare workers involved with the diagnosis of 2019 novel coronavirus disease (COVID-19) patient.
T5 622-747 Sentence denotes An electronic literature search was performed for peer-reviewed articles published from January 1, 2020, until June 19, 2020.
T6 748-839 Sentence denotes Published articles were then reviewed and included based on the applicability to the topic.
T7 840-1012 Sentence denotes The preferred diagnostic approach is the reverse transcription (RT) of the virus' ribonucleic acid (RNA) followed by polymerase chain reaction (PCR) amplification (RT-PCR).
T8 1013-1071 Sentence denotes However, this method has been proven to be time-consuming.
T9 1072-1260 Sentence denotes In improving the speed and efficiency of diagnostics, newer rapid diagnostic serological tests are in development for testing SARS-CoV-2, each with its unique advantages and disadvantages.
T10 1261-1456 Sentence denotes They could potentially be used as triage tests to rapidly identify patients who are very likely to have COVID-19 in combination with other accurate diagnostic methods, such as diagnostic imaging.
T11 1457-1642 Sentence denotes A combination of the disease history, clinical manifestations, laboratory diagnostic testing, and diagnostic imaging is crucial for making an accurate and useful diagnosis for COVID-19.
T12 1643-1808 Sentence denotes Hopefully, the continuous development and use of rapid diagnostic tests and the implementation of public health measures will help control the spread of the disease.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1 30-38 Disease denotes COVID-19 MESH:C000657245
16 67-114 Species denotes severe acute respiratory syndrome coronavirus 2 Tax:2697049
17 116-126 Species denotes SARS-CoV-2 Tax:2697049
18 259-267 Disease denotes infected MESH:D007239
19 290-296 Disease denotes deaths MESH:D003643
20 468-476 Species denotes patients Tax:9606
21 477-485 Disease denotes infected MESH:D007239
22 491-501 Species denotes SARS-CoV-2 Tax:2697049
23 571-601 Disease denotes 2019 novel coronavirus disease MESH:C000657245
24 603-611 Disease denotes COVID-19 MESH:C000657245
25 613-620 Species denotes patient Tax:9606
26 1198-1208 Species denotes SARS-CoV-2 Tax:2697049
27 1328-1336 Species denotes patients Tax:9606
28 1365-1373 Disease denotes COVID-19 MESH:C000657245
29 1633-1641 Disease denotes COVID-19 MESH:C000657245