PubMed:32838176
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T1 | 922-938 | Body_part | denotes | ribonucleic acid | http://purl.org/sig/ont/fma/fma67095 |
T2 | 940-943 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T1 | 30-38 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T2 | 67-114 | Disease | denotes | severe acute respiratory syndrome coronavirus 2 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T3 | 67-100 | Disease | denotes | severe acute respiratory syndrome | http://purl.obolibrary.org/obo/MONDO_0005091 |
T4 | 116-124 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T5 | 491-499 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T6 | 603-611 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T7 | 1198-1206 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T8 | 1365-1373 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T9 | 1633-1641 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 181-184 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
T2 | 672-676 | http://purl.obolibrary.org/obo/CLO_0008416 | denotes | peer |
T3 | 672-676 | http://purl.obolibrary.org/obo/CLO_0050081 | denotes | peer |
T4 | 915-920 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T5 | 1034-1037 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
T6 | 1161-1166 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tests |
T7 | 1190-1197 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | testing |
T8 | 1302-1307 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tests |
T9 | 1457-1458 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
T10 | 1542-1549 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | testing |
T11 | 1709-1714 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tests |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T1 | 922-938 | Chemical | denotes | ribonucleic acid | http://purl.obolibrary.org/obo/CHEBI_33697 |
T2 | 934-938 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
T3 | 940-943 | Chemical | denotes | RNA | http://purl.obolibrary.org/obo/CHEBI_33697 |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 881-902 | http://purl.obolibrary.org/obo/GO_0001171 | denotes | reverse transcription |
T2 | 889-902 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcription |
T3 | 904-906 | http://purl.obolibrary.org/obo/GO_0001171 | denotes | RT |
T4 | 1004-1006 | http://purl.obolibrary.org/obo/GO_0001171 | denotes | RT |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 0-39 | Sentence | denotes | Navigating the Diagnostics of COVID-19. |
T2 | 40-222 | Sentence | denotes | The recent outbreak of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) began in Hubei province, China, in December 2019 and has spread worldwide at an alarming rate. |
T3 | 223-392 | Sentence | denotes | With over eight million individuals infected and exceeding 400,000 deaths globally, the necessity to develop fast and efficient diagnostic methods is of high importance. |
T4 | 393-621 | Sentence | denotes | This paper reports on currently available diagnostic screening methods for patients infected with SARS-CoV-2 to guide frontline healthcare workers involved with the diagnosis of 2019 novel coronavirus disease (COVID-19) patient. |
T5 | 622-747 | Sentence | denotes | An electronic literature search was performed for peer-reviewed articles published from January 1, 2020, until June 19, 2020. |
T6 | 748-839 | Sentence | denotes | Published articles were then reviewed and included based on the applicability to the topic. |
T7 | 840-1012 | Sentence | denotes | The preferred diagnostic approach is the reverse transcription (RT) of the virus' ribonucleic acid (RNA) followed by polymerase chain reaction (PCR) amplification (RT-PCR). |
T8 | 1013-1071 | Sentence | denotes | However, this method has been proven to be time-consuming. |
T9 | 1072-1260 | Sentence | denotes | In improving the speed and efficiency of diagnostics, newer rapid diagnostic serological tests are in development for testing SARS-CoV-2, each with its unique advantages and disadvantages. |
T10 | 1261-1456 | Sentence | denotes | They could potentially be used as triage tests to rapidly identify patients who are very likely to have COVID-19 in combination with other accurate diagnostic methods, such as diagnostic imaging. |
T11 | 1457-1642 | Sentence | denotes | A combination of the disease history, clinical manifestations, laboratory diagnostic testing, and diagnostic imaging is crucial for making an accurate and useful diagnosis for COVID-19. |
T12 | 1643-1808 | Sentence | denotes | Hopefully, the continuous development and use of rapid diagnostic tests and the implementation of public health measures will help control the spread of the disease. |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
1 | 30-38 | Disease | denotes | COVID-19 | MESH:C000657245 |
16 | 67-114 | Species | denotes | severe acute respiratory syndrome coronavirus 2 | Tax:2697049 |
17 | 116-126 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
18 | 259-267 | Disease | denotes | infected | MESH:D007239 |
19 | 290-296 | Disease | denotes | deaths | MESH:D003643 |
20 | 468-476 | Species | denotes | patients | Tax:9606 |
21 | 477-485 | Disease | denotes | infected | MESH:D007239 |
22 | 491-501 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
23 | 571-601 | Disease | denotes | 2019 novel coronavirus disease | MESH:C000657245 |
24 | 603-611 | Disease | denotes | COVID-19 | MESH:C000657245 |
25 | 613-620 | Species | denotes | patient | Tax:9606 |
26 | 1198-1208 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
27 | 1328-1336 | Species | denotes | patients | Tax:9606 |
28 | 1365-1373 | Disease | denotes | COVID-19 | MESH:C000657245 |
29 | 1633-1641 | Disease | denotes | COVID-19 | MESH:C000657245 |