PubMed:32807241 / 281-610
Annnotations
LitCovid-PD-FMA-UBERON
{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T3","span":{"begin":95,"end":102},"obj":"Body_part"},{"id":"T4","span":{"begin":161,"end":168},"obj":"Body_part"}],"attributes":[{"id":"A3","pred":"fma_id","subj":"T3","obj":"http://purl.org/sig/ont/fma/fma82839"},{"id":"A4","pred":"fma_id","subj":"T4","obj":"http://purl.org/sig/ont/fma/fma82839"}],"text":"To assess the hypothesis that an adjunctive therapy with methylprednisolone and unfractionated heparin (UFH) or with methylprednisolone and low molecular weight heparin (LMWH) are more effective in reducing any-cause mortality in critically-ill ventilated patients with pneumonia from SARS-CoV-2 infection compared to LMWH alone."}
LitCovid-PD-MONDO
{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T4","span":{"begin":270,"end":279},"obj":"Disease"},{"id":"T5","span":{"begin":285,"end":293},"obj":"Disease"},{"id":"T6","span":{"begin":296,"end":305},"obj":"Disease"}],"attributes":[{"id":"A4","pred":"mondo_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/MONDO_0005249"},{"id":"A5","pred":"mondo_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A6","pred":"mondo_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"}],"text":"To assess the hypothesis that an adjunctive therapy with methylprednisolone and unfractionated heparin (UFH) or with methylprednisolone and low molecular weight heparin (LMWH) are more effective in reducing any-cause mortality in critically-ill ventilated patients with pneumonia from SARS-CoV-2 infection compared to LMWH alone."}
LitCovid-PD-CHEBI
{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T3","span":{"begin":57,"end":75},"obj":"Chemical"},{"id":"T4","span":{"begin":95,"end":102},"obj":"Chemical"},{"id":"T5","span":{"begin":117,"end":135},"obj":"Chemical"},{"id":"T6","span":{"begin":161,"end":168},"obj":"Chemical"}],"attributes":[{"id":"A3","pred":"chebi_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/CHEBI_6888"},{"id":"A4","pred":"chebi_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/CHEBI_28304"},{"id":"A5","pred":"chebi_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/CHEBI_6888"},{"id":"A6","pred":"chebi_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/CHEBI_28304"}],"text":"To assess the hypothesis that an adjunctive therapy with methylprednisolone and unfractionated heparin (UFH) or with methylprednisolone and low molecular weight heparin (LMWH) are more effective in reducing any-cause mortality in critically-ill ventilated patients with pneumonia from SARS-CoV-2 infection compared to LMWH alone."}
LitCovid-PubTator
{"project":"LitCovid-PubTator","denotations":[{"id":"122","span":{"begin":57,"end":75},"obj":"Chemical"},{"id":"123","span":{"begin":95,"end":102},"obj":"Chemical"},{"id":"124","span":{"begin":104,"end":107},"obj":"Chemical"},{"id":"125","span":{"begin":117,"end":135},"obj":"Chemical"},{"id":"126","span":{"begin":140,"end":168},"obj":"Chemical"},{"id":"127","span":{"begin":170,"end":174},"obj":"Chemical"},{"id":"128","span":{"begin":217,"end":226},"obj":"Disease"},{"id":"129","span":{"begin":230,"end":244},"obj":"Disease"},{"id":"130","span":{"begin":256,"end":264},"obj":"Species"},{"id":"131","span":{"begin":270,"end":279},"obj":"Disease"},{"id":"132","span":{"begin":285,"end":305},"obj":"Disease"},{"id":"133","span":{"begin":318,"end":322},"obj":"Chemical"}],"attributes":[{"id":"A122","pred":"tao:has_database_id","subj":"122","obj":"MESH:D008775"},{"id":"A123","pred":"tao:has_database_id","subj":"123","obj":"MESH:D006493"},{"id":"A124","pred":"tao:has_database_id","subj":"124","obj":"MESH:D006493"},{"id":"A125","pred":"tao:has_database_id","subj":"125","obj":"MESH:D008775"},{"id":"A126","pred":"tao:has_database_id","subj":"126","obj":"MESH:D006495"},{"id":"A127","pred":"tao:has_database_id","subj":"127","obj":"MESH:D006495"},{"id":"A128","pred":"tao:has_database_id","subj":"128","obj":"MESH:D003643"},{"id":"A129","pred":"tao:has_database_id","subj":"129","obj":"MESH:D016638"},{"id":"A130","pred":"tao:has_database_id","subj":"130","obj":"Tax:9606"},{"id":"A131","pred":"tao:has_database_id","subj":"131","obj":"MESH:D011014"},{"id":"A132","pred":"tao:has_database_id","subj":"132","obj":"MESH:C000657245"},{"id":"A133","pred":"tao:has_database_id","subj":"133","obj":"MESH:D006495"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"To assess the hypothesis that an adjunctive therapy with methylprednisolone and unfractionated heparin (UFH) or with methylprednisolone and low molecular weight heparin (LMWH) are more effective in reducing any-cause mortality in critically-ill ventilated patients with pneumonia from SARS-CoV-2 infection compared to LMWH alone."}
LitCovid-PD-HP
{"project":"LitCovid-PD-HP","denotations":[{"id":"T2","span":{"begin":270,"end":279},"obj":"Phenotype"}],"attributes":[{"id":"A2","pred":"hp_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/HP_0002090"}],"text":"To assess the hypothesis that an adjunctive therapy with methylprednisolone and unfractionated heparin (UFH) or with methylprednisolone and low molecular weight heparin (LMWH) are more effective in reducing any-cause mortality in critically-ill ventilated patients with pneumonia from SARS-CoV-2 infection compared to LMWH alone."}
Covid19_manual_annotation_v2
{"project":"Covid19_manual_annotation_v2","denotations":[{"id":"122","span":{"begin":57,"end":75},"obj":"Chemical"},{"id":"123","span":{"begin":80,"end":102},"obj":"Glycan"},{"id":"124","span":{"begin":104,"end":107},"obj":"Glycan"},{"id":"125","span":{"begin":117,"end":135},"obj":"Chemical"},{"id":"126","span":{"begin":140,"end":168},"obj":"Glycan"},{"id":"127","span":{"begin":170,"end":174},"obj":"Glycan"},{"id":"128","span":{"begin":217,"end":226},"obj":"Die"},{"id":"130","span":{"begin":256,"end":264},"obj":"Species"},{"id":"131","span":{"begin":270,"end":279},"obj":"Disease"},{"id":"132","span":{"begin":285,"end":295},"obj":"Disease"},{"id":"133","span":{"begin":318,"end":322},"obj":"Glycan"},{"id":"T148","span":{"begin":296,"end":305},"obj":"Disease"},{"id":"T149","span":{"begin":245,"end":255},"obj":"Status_of_Care"},{"id":"T150","span":{"begin":44,"end":51},"obj":"Therapy"},{"id":"T151","span":{"begin":33,"end":43},"obj":"Type"},{"id":"T152","span":{"begin":44,"end":51},"obj":"Therapy"},{"id":"T153","span":{"begin":198,"end":206},"obj":"NegativeRegulation"},{"id":"T154","span":{"begin":180,"end":184},"obj":"PositiveRegulation"},{"id":"T155","span":{"begin":44,"end":51},"obj":"Therapy"},{"id":"T65","span":{"begin":230,"end":244},"obj":"NegativeRegulation"}],"relations":[{"id":"R10","pred":"of_a","subj":"T151","obj":"T152"},{"id":"R11","pred":"of_a","subj":"T151","obj":"T155"},{"id":"R12","pred":"using","subj":"122","obj":"T150"},{"id":"R13","pred":"using","subj":"123","obj":"T150"},{"id":"R14","pred":"abbreviation","subj":"124","obj":"123"},{"id":"R15","pred":"abbreviation","subj":"127","obj":"126"},{"id":"R17","pred":"using","subj":"126","obj":"T152"},{"id":"R18","pred":"using","subj":"133","obj":"T155"},{"id":"R19","pred":"is_a","subj":"T65","obj":"131"},{"id":"R24","pred":"is_a","subj":"T150","obj":"T154"},{"id":"R9","pred":"of_a","subj":"T151","obj":"T150"},{"id":"R16","pred":"using","subj":"125","obj":"T152"},{"id":"R20","pred":"has_status","subj":"130","obj":"T149"},{"id":"R21","pred":"of_a","subj":"132","obj":"T148"},{"id":"R217","pred":"is_a","subj":"130","obj":"128"},{"id":"R22","pred":"cause_of","subj":"T148","obj":"130"},{"id":"R23","pred":"has_a","subj":"131","obj":"130"},{"id":"R25","pred":"is_a","subj":"T152","obj":"T154"},{"id":"R26","pred":"against","subj":"T155","obj":"T154"},{"id":"R28","pred":"is_a","subj":"T153","obj":"128"},{"id":"R29","pred":"is_a","subj":"T154","obj":"T153"}],"attributes":[{"id":"A126","pred":"tao:has_database_id","subj":"126","obj":"MESH:D006495"},{"id":"A272","pred":"ForCovid19","subj":"125","obj":"drug"},{"id":"A273","pred":"ForCovid19","subj":"126","obj":"drug"},{"id":"A131","pred":"tao:has_database_id","subj":"131","obj":"MESH:D011014"},{"id":"A127","pred":"tao:has_database_id","subj":"127","obj":"MESH:D006495"},{"id":"A274","pred":"ForCovid19","subj":"127","obj":"drug"},{"id":"A130","pred":"tao:has_database_id","subj":"130","obj":"Tax:9606"},{"id":"A128","pred":"tao:has_database_id","subj":"128","obj":"MESH:D009026"},{"id":"A243","pred":"tao:has_database_id","subj":"123","obj":"MESH:D006493"},{"id":"A270","pred":"ForCovid19","subj":"123","obj":"drug"},{"id":"A374","pred":"tao:has_database_id","subj":"T148","obj":"MESH:MESH:D007239"},{"id":"A122","pred":"tao:has_database_id","subj":"122","obj":"MESH:D008775"},{"id":"A269","pred":"ForCovid19","subj":"122","obj":"drug"},{"id":"A132","pred":"tao:has_database_id","subj":"132","obj":"MESH:D000086382"},{"id":"A244","pred":"tao:has_database_id","subj":"124","obj":"MESH:D006493"},{"id":"A271","pred":"ForCovid19","subj":"124","obj":"drug"},{"id":"A133","pred":"tao:has_database_id","subj":"133","obj":"MESH:D006495"},{"id":"A375","pred":"ForCovid19","subj":"133","obj":"drug"},{"id":"A125","pred":"tao:has_database_id","subj":"125","obj":"MESH:D008775"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"BioProject","uri":"https://www.ncbi.nlm.nih.gov/bioproject/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"},{"prefix":"HP","uri":"https://hpo.jax.org/app/browse/term/HP:"},{"prefix":"BioSample","uri":"https://www.ncbi.nlm.nih.gov/biosample/"}],"text":"To assess the hypothesis that an adjunctive therapy with methylprednisolone and unfractionated heparin (UFH) or with methylprednisolone and low molecular weight heparin (LMWH) are more effective in reducing any-cause mortality in critically-ill ventilated patients with pneumonia from SARS-CoV-2 infection compared to LMWH alone."}
LitCovid-sentences
{"project":"LitCovid-sentences","denotations":[{"id":"T4","span":{"begin":0,"end":329},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"To assess the hypothesis that an adjunctive therapy with methylprednisolone and unfractionated heparin (UFH) or with methylprednisolone and low molecular weight heparin (LMWH) are more effective in reducing any-cause mortality in critically-ill ventilated patients with pneumonia from SARS-CoV-2 infection compared to LMWH alone."}
Covid19_manual_annotation
{"project":"Covid19_manual_annotation","denotations":[{"id":"122","span":{"begin":57,"end":75},"obj":"Chemical"},{"id":"123","span":{"begin":80,"end":102},"obj":"Chemical"},{"id":"124","span":{"begin":104,"end":107},"obj":"Chemical"},{"id":"125","span":{"begin":117,"end":135},"obj":"Chemical"},{"id":"126","span":{"begin":140,"end":168},"obj":"Chemical"},{"id":"127","span":{"begin":170,"end":174},"obj":"Chemical"},{"id":"128","span":{"begin":217,"end":226},"obj":"Die"},{"id":"130","span":{"begin":256,"end":264},"obj":"Species"},{"id":"131","span":{"begin":270,"end":279},"obj":"Disease"},{"id":"132","span":{"begin":285,"end":295},"obj":"Disease"},{"id":"133","span":{"begin":318,"end":322},"obj":"Chemical"},{"id":"T148","span":{"begin":296,"end":305},"obj":"Disease"},{"id":"T149","span":{"begin":245,"end":255},"obj":"Therapy"},{"id":"T150","span":{"begin":44,"end":51},"obj":"Therapy"},{"id":"T151","span":{"begin":33,"end":43},"obj":"Type"},{"id":"T152","span":{"begin":44,"end":51},"obj":"Therapy"},{"id":"T153","span":{"begin":198,"end":206},"obj":"Decrease"},{"id":"T154","span":{"begin":180,"end":184},"obj":"PositiveRegulation"},{"id":"T155","span":{"begin":44,"end":51},"obj":"Therapy"},{"id":"T65","span":{"begin":230,"end":244},"obj":"Severity"}],"relations":[{"id":"R110","pred":"against","subj":"T155","obj":"T154"},{"id":"R88","pred":"abbreviation","subj":"124","obj":"123"},{"id":"R89","pred":"abbreviation","subj":"127","obj":"126"},{"id":"R93","pred":"has_a","subj":"T148","obj":"130"},{"id":"R94","pred":"has_a","subj":"131","obj":"130"},{"id":"R95","pred":"for","subj":"T149","obj":"131"},{"id":"R100","pred":"using","subj":"125","obj":"T152"},{"id":"R101","pred":"using","subj":"126","obj":"T152"},{"id":"R102","pred":"is_a","subj":"T152","obj":"T154"},{"id":"R103","pred":"is_a","subj":"T150","obj":"T154"},{"id":"R104","pred":"is_a","subj":"T154","obj":"T153"},{"id":"R105","pred":"is_a","subj":"T153","obj":"128"},{"id":"R106","pred":"is_a","subj":"128","obj":"130"},{"id":"R107","pred":"of_a","subj":"T151","obj":"T152"},{"id":"R108","pred":"of_a","subj":"T151","obj":"T155"},{"id":"R109","pred":"using","subj":"133","obj":"T155"},{"id":"R87","pred":"of_a","subj":"132","obj":"T148"},{"id":"R96","pred":"of_a","subj":"T65","obj":"131"},{"id":"R97","pred":"of_a","subj":"T151","obj":"T150"},{"id":"R98","pred":"using","subj":"122","obj":"T150"},{"id":"R99","pred":"using","subj":"123","obj":"T150"}],"attributes":[{"id":"A243","pred":"tao:has_database_id","subj":"123","obj":"MESH:D006493"},{"id":"A131","pred":"tao:has_database_id","subj":"131","obj":"MESH:D011014"},{"id":"A122","pred":"tao:has_database_id","subj":"122","obj":"MESH:D008775"},{"id":"A269","pred":"ForCovid19","subj":"122","obj":"drug"},{"id":"A244","pred":"tao:has_database_id","subj":"124","obj":"MESH:D006493"},{"id":"A271","pred":"ForCovid19","subj":"124","obj":"drug"},{"id":"A126","pred":"tao:has_database_id","subj":"126","obj":"MESH:D006495"},{"id":"A273","pred":"ForCovid19","subj":"126","obj":"drug"},{"id":"A374","pred":"tao:has_database_id","subj":"T148","obj":"MESH:MESH:D007239"},{"id":"A127","pred":"tao:has_database_id","subj":"127","obj":"MESH:D006495"},{"id":"A274","pred":"ForCovid19","subj":"127","obj":"drug"},{"id":"A133","pred":"tao:has_database_id","subj":"133","obj":"MESH:D006495"},{"id":"A375","pred":"ForCovid19","subj":"133","obj":"drug"},{"id":"A132","pred":"tao:has_database_id","subj":"132","obj":"MESH:D000086382"},{"id":"A270","pred":"ForCovid19","subj":"123","obj":"drug"},{"id":"A130","pred":"tao:has_database_id","subj":"130","obj":"Tax:9606"},{"id":"A128","pred":"tao:has_database_id","subj":"128","obj":"MESH:D009026"},{"id":"A125","pred":"tao:has_database_id","subj":"125","obj":"MESH:D008775"},{"id":"A272","pred":"ForCovid19","subj":"125","obj":"drug"}],"text":"To assess the hypothesis that an adjunctive therapy with methylprednisolone and unfractionated heparin (UFH) or with methylprednisolone and low molecular weight heparin (LMWH) are more effective in reducing any-cause mortality in critically-ill ventilated patients with pneumonia from SARS-CoV-2 infection compared to LMWH alone."}