PubMed:32801842
Annnotations
LitCovid-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 46-62 | UBERON:0002280 | denotes | Otolaryngologist |
| T2 | 142-153 | UBERON:0001004 | denotes | respiratory |
| T3 | 163-169 | NCBITaxon:11118 | denotes | corona |
| T4 | 170-175 | NCBITaxon:10376 | denotes | virus |
| T5 | 177-185 | SP_9 | denotes | MERS-CoV |
| T6 | 350-367 | UBERON:0002280 | denotes | otolaryngologists |
| T7 | 369-377 | SP_9 | denotes | MERS-CoV |
| T8 | 393-406 | NCBITaxon:11118 | denotes | Coronaviridae |
| T9 | 445-449 | SP_9 | denotes | MERS |
| T10 | 463-468 | SP_3 | denotes | camel |
| T11 | 472-477 | SP_6 | denotes | human |
| T12 | 472-477 | NCBITaxon:9606 | denotes | human |
| T13 | 487-492 | SP_6 | denotes | human |
| T14 | 487-492 | NCBITaxon:9606 | denotes | human |
| T15 | 496-501 | SP_6 | denotes | human |
| T16 | 496-501 | NCBITaxon:9606 | denotes | human |
| T17 | 545-549 | SP_9 | denotes | MERS |
| T18 | 593-598 | GO:0006260 | denotes | Viral |
| T19 | 599-610 | GO:0006260 | denotes | replication |
| T20 | 651-664 | CL:0000084 | denotes | T lymphocytes |
| T21 | 671-680 | GO:0006915 | denotes | apoptosis |
| T22 | 742-747 | NCBITaxon:10239 | denotes | virus |
| T23 | 820-843 | UBERON:0001558 | denotes | lower respiratory tract |
| T24 | 1019-1024 | NCBITaxon:10239 | denotes | viral |
| T25 | 1025-1036 | GO:0005840 | denotes | ribonucleic |
| T26 | 1037-1041 | CHEBI:37527 | denotes | acid |
| T27 | 1037-1041 | CHEBI:37527 | denotes | acid |
| T28 | 1049-1055 | UBERON:0007311 | denotes | sputum |
| T29 | 1059-1067 | UBERON:0003126 | denotes | tracheal |
| T30 | 1068-1074 | UBERON:0006314 | denotes | fluids |
| T31 | 1076-1091 | UBERON:0002280 | denotes | Otolaryngologic |
| T32 | 1129-1137 | CHEBI:60809 | denotes | adjuvant |
| T33 | 1129-1137 | CHEBI:60809 | denotes | adjuvant |
| T34 | 1171-1176 | CHEBI:36044 | denotes | drugs |
| T35 | 1171-1176 | CHEBI:36044 | denotes | drugs |
| T36 | 1256-1273 | UBERON:0002280 | denotes | otolaryngologists |
Inflammaging
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-75 | Sentence | denotes | Middle East Respiratory Syndrome - What Every Otolaryngologist Should Know: |
| T2 | 76-85 | Sentence | denotes | A Review. |
| T3 | 86-368 | Sentence | denotes | In this study, we illustrate the history of Middle East respiratory syndrome corona virus (MERS-CoV) infection from the first reported case to the disease's outbreak and subsequent worldwide decline, with the aim of briefly defining the problem for the benefit of otolaryngologists. |
| T4 | 369-515 | Sentence | denotes | MERS-CoV belongs to the Coronaviridae family and causes a zoonotic disease, MERS, with strong camel to human and weak human to human transmission. |
| T5 | 516-592 | Sentence | denotes | The first documented case of MERS was reported in Saudi Arabia in June 2012. |
| T6 | 593-702 | Sentence | denotes | Viral replication produces inflammatory markers targeting T lymphocytes, with apoptosis being the end result. |
| T7 | 703-776 | Sentence | denotes | Nevertheless, the pathogenesis of this virus is not yet fully understood. |
| T8 | 777-927 | Sentence | denotes | The main symptomatic appearance is of mild lower respiratory tract infection with dyspnea and persistent cough in addition to systemic manifestations. |
| T9 | 928-1075 | Sentence | denotes | The diagnosis is mainly based on the use of polymerase chain reaction for the detection of viral ribonucleic acid in the sputum or tracheal fluids. |
| T10 | 1076-1332 | Sentence | denotes | Otolaryngologic treatment mainly involves supportive adjuvant usage of interferon or antiviral drugs; however, approximately one-third of patients may not survive, and, therefore, otolaryngologists should be familiar with and remain mindful of the disease. |
| T1 | 0-75 | Sentence | denotes | Middle East Respiratory Syndrome - What Every Otolaryngologist Should Know: |
| T2 | 76-85 | Sentence | denotes | A Review. |
| T3 | 86-368 | Sentence | denotes | In this study, we illustrate the history of Middle East respiratory syndrome corona virus (MERS-CoV) infection from the first reported case to the disease's outbreak and subsequent worldwide decline, with the aim of briefly defining the problem for the benefit of otolaryngologists. |
| T4 | 369-515 | Sentence | denotes | MERS-CoV belongs to the Coronaviridae family and causes a zoonotic disease, MERS, with strong camel to human and weak human to human transmission. |
| T5 | 516-592 | Sentence | denotes | The first documented case of MERS was reported in Saudi Arabia in June 2012. |
| T6 | 593-702 | Sentence | denotes | Viral replication produces inflammatory markers targeting T lymphocytes, with apoptosis being the end result. |
| T7 | 703-776 | Sentence | denotes | Nevertheless, the pathogenesis of this virus is not yet fully understood. |
| T8 | 777-927 | Sentence | denotes | The main symptomatic appearance is of mild lower respiratory tract infection with dyspnea and persistent cough in addition to systemic manifestations. |
| T9 | 928-1075 | Sentence | denotes | The diagnosis is mainly based on the use of polymerase chain reaction for the detection of viral ribonucleic acid in the sputum or tracheal fluids. |
| T10 | 1076-1332 | Sentence | denotes | Otolaryngologic treatment mainly involves supportive adjuvant usage of interferon or antiviral drugs; however, approximately one-third of patients may not survive, and, therefore, otolaryngologists should be familiar with and remain mindful of the disease. |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T1 | 651-664 | Body_part | denotes | T lymphocytes | http://purl.org/sig/ont/fma/fma62870 |
| T2 | 820-843 | Body_part | denotes | lower respiratory tract | http://purl.org/sig/ont/fma/fma45662 |
| T3 | 1025-1041 | Body_part | denotes | ribonucleic acid | http://purl.org/sig/ont/fma/fma67095 |
| T4 | 1049-1055 | Body_part | denotes | sputum | http://purl.org/sig/ont/fma/fma312401 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 820-843 | Body_part | denotes | lower respiratory tract | http://purl.obolibrary.org/obo/UBERON_0001558 |
| T2 | 826-843 | Body_part | denotes | respiratory tract | http://purl.obolibrary.org/obo/UBERON_0000065 |
| T3 | 1049-1055 | Body_part | denotes | sputum | http://purl.obolibrary.org/obo/UBERON_0007311 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 187-196 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T2 | 427-443 | Disease | denotes | zoonotic disease | http://purl.obolibrary.org/obo/MONDO_0025481 |
| T3 | 826-853 | Disease | denotes | respiratory tract infection | http://purl.obolibrary.org/obo/MONDO_0024355 |
| T4 | 844-853 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 76-77 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T2 | 170-175 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T3 | 295-298 | http://purl.obolibrary.org/obo/PR_000001343 | denotes | aim |
| T4 | 425-426 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T5 | 463-468 | http://purl.obolibrary.org/obo/NCBITaxon_9837 | denotes | camel |
| T6 | 472-477 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
| T7 | 487-495 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human to |
| T8 | 496-501 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
| T9 | 742-747 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T10 | 820-843 | http://purl.obolibrary.org/obo/UBERON_0001558 | denotes | lower respiratory tract |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T1 | 163-169 | Chemical | denotes | corona | http://purl.obolibrary.org/obo/CHEBI_37409 |
| T2 | 1025-1041 | Chemical | denotes | ribonucleic acid | http://purl.obolibrary.org/obo/CHEBI_33697 |
| T3 | 1037-1041 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T4 | 1129-1137 | Chemical | denotes | adjuvant | http://purl.obolibrary.org/obo/CHEBI_60809 |
| T5 | 1147-1157 | Chemical | denotes | interferon | http://purl.obolibrary.org/obo/CHEBI_52999 |
| T6 | 1161-1176 | Chemical | denotes | antiviral drugs | http://purl.obolibrary.org/obo/CHEBI_36044 |
| T7 | 1161-1170 | Chemical | denotes | antiviral | http://purl.obolibrary.org/obo/CHEBI_22587 |
| T8 | 1171-1176 | Chemical | denotes | drugs | http://purl.obolibrary.org/obo/CHEBI_23888 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 593-610 | http://purl.obolibrary.org/obo/GO_0019079 | denotes | Viral replication |
| T2 | 593-610 | http://purl.obolibrary.org/obo/GO_0019058 | denotes | Viral replication |
| T3 | 651-680 | http://purl.obolibrary.org/obo/GO_0070231 | denotes | T lymphocytes, with apoptosis |
| T4 | 671-680 | http://purl.obolibrary.org/obo/GO_0097194 | denotes | apoptosis |
| T5 | 671-680 | http://purl.obolibrary.org/obo/GO_0006915 | denotes | apoptosis |
| T6 | 721-733 | http://purl.obolibrary.org/obo/GO_0009405 | denotes | pathogenesis |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-75 | Sentence | denotes | Middle East Respiratory Syndrome - What Every Otolaryngologist Should Know: |
| T2 | 76-85 | Sentence | denotes | A Review. |
| T3 | 86-368 | Sentence | denotes | In this study, we illustrate the history of Middle East respiratory syndrome corona virus (MERS-CoV) infection from the first reported case to the disease's outbreak and subsequent worldwide decline, with the aim of briefly defining the problem for the benefit of otolaryngologists. |
| T4 | 369-515 | Sentence | denotes | MERS-CoV belongs to the Coronaviridae family and causes a zoonotic disease, MERS, with strong camel to human and weak human to human transmission. |
| T5 | 516-592 | Sentence | denotes | The first documented case of MERS was reported in Saudi Arabia in June 2012. |
| T6 | 593-702 | Sentence | denotes | Viral replication produces inflammatory markers targeting T lymphocytes, with apoptosis being the end result. |
| T7 | 703-776 | Sentence | denotes | Nevertheless, the pathogenesis of this virus is not yet fully understood. |
| T8 | 777-927 | Sentence | denotes | The main symptomatic appearance is of mild lower respiratory tract infection with dyspnea and persistent cough in addition to systemic manifestations. |
| T9 | 928-1075 | Sentence | denotes | The diagnosis is mainly based on the use of polymerase chain reaction for the detection of viral ribonucleic acid in the sputum or tracheal fluids. |
| T10 | 1076-1332 | Sentence | denotes | Otolaryngologic treatment mainly involves supportive adjuvant usage of interferon or antiviral drugs; however, approximately one-third of patients may not survive, and, therefore, otolaryngologists should be familiar with and remain mindful of the disease. |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 16 | 130-175 | Species | denotes | Middle East respiratory syndrome corona virus | Tax:1335626 |
| 17 | 177-185 | Species | denotes | MERS-CoV | Tax:1335626 |
| 18 | 187-196 | Disease | denotes | infection | MESH:D007239 |
| 19 | 369-377 | Species | denotes | MERS-CoV | Tax:1335626 |
| 20 | 393-406 | Species | denotes | Coronaviridae | Tax:11118 |
| 21 | 427-443 | Disease | denotes | zoonotic disease | MESH:D015047 |
| 22 | 445-449 | Disease | denotes | MERS | MESH:D018352 |
| 23 | 463-468 | Species | denotes | camel | Tax:9837 |
| 24 | 472-477 | Species | denotes | human | Tax:9606 |
| 25 | 487-492 | Species | denotes | human | Tax:9606 |
| 26 | 496-501 | Species | denotes | human | Tax:9606 |
| 27 | 545-549 | Disease | denotes | MERS | MESH:D018352 |
| 28 | 826-853 | Disease | denotes | respiratory tract infection | MESH:D012141 |
| 29 | 859-866 | Disease | denotes | dyspnea | MESH:D004417 |
| 30 | 882-887 | Disease | denotes | cough | MESH:D003371 |
| 31 | 1214-1222 | Species | denotes | patients | Tax:9606 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T1 | 820-853 | Phenotype | denotes | lower respiratory tract infection | http://purl.obolibrary.org/obo/HP_0002783 |
| T2 | 859-866 | Phenotype | denotes | dyspnea | http://purl.obolibrary.org/obo/HP_0002094 |
| T3 | 882-887 | Phenotype | denotes | cough | http://purl.obolibrary.org/obo/HP_0012735 |