PubMed:32616067 / 2229-2790 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T9 260-266 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203
T10 323-328 Body_part denotes heart http://purl.org/sig/ont/fma/fma7088
T11 381-386 Body_part denotes liver http://purl.org/sig/ont/fma/fma7197
T12 439-446 Body_part denotes glucose http://purl.org/sig/ont/fma/fma82743

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T9 260-266 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113
T10 323-328 Body_part denotes heart http://purl.obolibrary.org/obo/UBERON_0000948
T11 381-386 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T20 9-17 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T21 87-95 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T22 117-142 Disease denotes hypersensitivity reaction http://purl.obolibrary.org/obo/MONDO_0000605
T23 117-133 Disease denotes hypersensitivity http://purl.obolibrary.org/obo/MONDO_0005271
T24 208-223 Disease denotes retinal disease http://purl.obolibrary.org/obo/MONDO_0005283
T25 233-242 Disease denotes porphyria http://purl.obolibrary.org/obo/MONDO_0019142|http://purl.obolibrary.org/obo/MONDO_0037939
T27 252-274 Disease denotes chronic kidney disease http://purl.obolibrary.org/obo/MONDO_0005300
T28 260-274 Disease denotes kidney disease http://purl.obolibrary.org/obo/MONDO_0001343|http://purl.obolibrary.org/obo/MONDO_0005240
T30 276-279 Disease denotes CKD http://purl.obolibrary.org/obo/MONDO_0005300
T31 305-313 Disease denotes epilepsy http://purl.obolibrary.org/obo/MONDO_0005027
T32 323-336 Disease denotes heart failure http://purl.obolibrary.org/obo/MONDO_0005252
T33 381-394 Disease denotes liver disease http://purl.obolibrary.org/obo/MONDO_0005154
T34 396-414 Disease denotes Gilbert's syndrome http://purl.obolibrary.org/obo/MONDO_0007745
T35 474-478 Disease denotes G6PD http://purl.obolibrary.org/obo/MONDO_0005775

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T24 27-31 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T25 260-266 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidney
T26 260-266 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidney
T27 260-266 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidney
T28 323-328 http://purl.obolibrary.org/obo/UBERON_0000948 denotes heart
T29 323-328 http://purl.obolibrary.org/obo/UBERON_0007100 denotes heart
T30 323-328 http://purl.obolibrary.org/obo/UBERON_0015228 denotes heart
T31 323-328 http://www.ebi.ac.uk/efo/EFO_0000815 denotes heart
T32 381-386 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T33 381-386 http://www.ebi.ac.uk/efo/EFO_0000887 denotes liver
T34 491-493 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T6 146-164 Chemical denotes hydroxychloroquine http://purl.obolibrary.org/obo/CHEBI_5801
T7 166-177 Chemical denotes chloroquine http://purl.obolibrary.org/obo/CHEBI_3638
T8 183-198 Chemical denotes aminoquinolines http://purl.obolibrary.org/obo/CHEBI_36709
T9 208-215 Chemical denotes retinal http://purl.obolibrary.org/obo/CHEBI_15035
T10 439-446 Chemical denotes glucose http://purl.obolibrary.org/obo/CHEBI_17234|http://purl.obolibrary.org/obo/CHEBI_4167
T12 449-458 Chemical denotes phosphate http://purl.obolibrary.org/obo/CHEBI_18367|http://purl.obolibrary.org/obo/CHEBI_26020|http://purl.obolibrary.org/obo/CHEBI_35780|http://purl.obolibrary.org/obo/CHEBI_43474

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 117-133 Phenotype denotes hypersensitivity http://purl.obolibrary.org/obo/HP_0041092
T2 208-223 Phenotype denotes retinal disease http://purl.obolibrary.org/obo/HP_0000479
T3 252-274 Phenotype denotes chronic kidney disease http://purl.obolibrary.org/obo/HP_0012622
T4 305-313 Phenotype denotes epilepsy http://purl.obolibrary.org/obo/HP_0001250
T5 323-336 Phenotype denotes heart failure http://purl.obolibrary.org/obo/HP_0001635
T6 381-394 Phenotype denotes liver disease http://purl.obolibrary.org/obo/HP_0001392

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 117-133 http://purl.obolibrary.org/obo/GO_0002524 denotes hypersensitivity
T2 281-285 http://purl.obolibrary.org/obo/GO_0005006 denotes eGFR

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T16 0-561 Sentence denotes 1) Known COVID-19 positive test at baseline (if available) 2) Symptomatic for possible COVID-19 at baseline 3) Known hypersensitivity reaction to hydroxychloroquine, chloroquine or 4-aminoquinolines 4) Known retinal disease 5) Known porphyria 6) Known chronic kidney disease (CKD; eGFR<30ml/min) 7) Known epilepsy 8) Known heart failure or conduction problems 9) Known significant liver disease (Gilbert's syndrome is permitted) 10) Known glucose-6-phosphate dehydrogenase (G6PD) deficiency 11) Currently taking any of the following contraindicated medications:

hydroxychloroquine

Id Subject Object Predicate Lexical cue hp_id
T1 117-133 Phenotype denotes hypersensitivity http://purl.obolibrary.org/obo/HP_0041092
T2 208-223 Phenotype denotes retinal disease http://purl.obolibrary.org/obo/HP_0000479
T3 252-274 Phenotype denotes chronic kidney disease http://purl.obolibrary.org/obo/HP_0012622
T4 305-313 Phenotype denotes epilepsy http://purl.obolibrary.org/obo/HP_0001250
T5 323-336 Phenotype denotes heart failure http://purl.obolibrary.org/obo/HP_0001635
T6 381-394 Phenotype denotes liver disease http://purl.obolibrary.org/obo/HP_0001392