> top > docs > PubMed:32609142 > annotations

PubMed:32609142 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 10-18 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T2 148-156 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T3 309-318 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T4 322-369 Disease denotes severe acute respiratory syndrome coronavirus 2 http://purl.obolibrary.org/obo/MONDO_0100096
T5 322-355 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T6 371-379 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 36-37 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T2 145-147 http://www.ebi.ac.uk/efo/EFO_0000265 denotes da
T3 246-255 http://purl.obolibrary.org/obo/BFO_0000030 denotes OBJECTIVE
T4 401-402 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T5 529-530 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T6 1010-1015 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tests
T7 1074-1075 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 856-861 http://purl.obolibrary.org/obo/GO_0050909 denotes taste

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-117 Sentence denotes Suspected COVID-19 case definition: a narrative review of the most frequent signs and symptoms among confirmed cases.
T2 118-245 Sentence denotes Definição de caso suspeito da COVID-19: uma revisão narrativa dos sinais e sintomas mais frequentes entre os casos confirmados.
T3 246-383 Sentence denotes OBJECTIVE: to describe the most frequent signs and symptoms of infection by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2).
T4 384-632 Sentence denotes METHODS: this is a narrative literature review carried out in April 2020; the search was performed on electronic databases and complemented with a manual review of the references of the selected papers and Brazilian Ministry of Health publications.
T5 633-958 Sentence denotes RESULTS: the spectrum of clinical disease was wide; fever, coughing and dyspnea were the most frequent signs/symptoms, however, they may not be present, thus hindering case definition; gastrointestinal symptoms and loss of taste or smell have been reported among mild cases; dyspnea was frequent among severe and fatal cases.
T6 959-1180 Sentence denotes CONCLUSION: considering the scarcity of diagnostic tests and the diversity of symptoms, health services should use a sensitive case definition, in order to adopt appropriate surveillance, prevention and treatment actions.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1 10-18 Disease denotes COVID-19 MESH:C000657245
11 309-318 Disease denotes infection MESH:D007239
12 322-369 Species denotes severe acute respiratory syndrome coronavirus 2 Tax:2697049
13 371-381 Species denotes SARS-CoV-2 Tax:2697049
14 685-690 Disease denotes fever MESH:D005334
15 692-700 Disease denotes coughing MESH:D003371
16 705-712 Disease denotes dyspnea MESH:D004417
17 818-843 Disease denotes gastrointestinal symptoms MESH:D012817
18 848-861 Disease denotes loss of taste MESH:D013651
19 908-915 Disease denotes dyspnea MESH:D004417

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 685-690 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T2 692-700 Phenotype denotes coughing http://purl.obolibrary.org/obo/HP_0012735
T3 705-712 Phenotype denotes dyspnea http://purl.obolibrary.org/obo/HP_0002094
T4 848-861 Phenotype denotes loss of taste http://purl.obolibrary.org/obo/HP_0000223
T5 908-915 Phenotype denotes dyspnea http://purl.obolibrary.org/obo/HP_0002094

ENG_RE_CONSENSUS

Id Subject Object Predicate Lexical cue
T0 278-286 HP_0040282 denotes frequent
T19 322-369 HP_0033141 denotes severe acute respiratory syndrome coronavirus 2
T17 322-369 DOID_0080600 denotes severe acute respiratory syndrome coronavirus 2
T20 371-381 HP_0033141 denotes SARS-CoV-2
T18 371-381 DOID_0080600 denotes SARS-CoV-2
T5 667-674 DOID_4 denotes disease
T15 685-690 HP_0001945 denotes fever
T6 692-700 HP_0012735 denotes coughing
T7 705-712 HP_0002094 denotes dyspnea
T8 727-735 HP_0040282 denotes frequent
T16 818-843 HP_0012719 denotes gastrointestinal symptoms
T9 856-861 GO_0050909 denotes taste
T14 865-870 GO_0007608 denotes smell
T10 896-900 HP_0012825 denotes mild
T11 908-915 HP_0002094 denotes dyspnea
T12 920-928 HP_0040282 denotes frequent
T13 935-941 HP_0012828 denotes severe
R1 T16 T10 effect gastrointestinal symptoms,mild
R2 T9 T10 effect taste,mild
R3 T14 T10 effect smell,mild
R4 T10 T14 effect mild,smell
R5 T10 T9 effect mild,taste
R6 T10 T16 effect mild,gastrointestinal symptoms
R7 T13 T11 effect severe,dyspnea
R8 T11 T13 effect dyspnea,severe
R9 T20 T15 effect SARS-CoV-2,fever
R10 T20 T6 effect SARS-CoV-2,coughing
R11 T20 T7 effect SARS-CoV-2,dyspnea
R12 T18 T15 effect SARS-CoV-2,fever
R13 T18 T6 effect SARS-CoV-2,coughing
R14 T18 T7 effect SARS-CoV-2,dyspnea
R15 T19 T15 effect severe acute respiratory syndrome coronavirus 2,fever
R16 T19 T6 effect severe acute respiratory syndrome coronavirus 2,coughing
R17 T19 T7 effect severe acute respiratory syndrome coronavirus 2,dyspnea
R18 T17 T15 effect severe acute respiratory syndrome coronavirus 2,fever
R19 T17 T6 effect severe acute respiratory syndrome coronavirus 2,coughing
R20 T17 T7 effect severe acute respiratory syndrome coronavirus 2,dyspnea

ENG_NER_NEL_CONSENSUS

Id Subject Object Predicate Lexical cue
T1 278-286 HP:0040282 denotes frequent
T13 413-423 MESH:D008091 denotes literature
T14 424-430 MESH:D016454 denotes review
T15 538-544 MESH:D016454 denotes review
T17 667-674 DOID:4 denotes disease
T18 667-674 MESH:D004194 denotes disease
T19 692-700 HP:0012735 denotes coughing
T20 705-712 HP:0002094 denotes dyspnea
T21 705-712 MESH:D004417 denotes dyspnea
T22 727-735 HP:0040282 denotes frequent
T24 856-861 MESH:D013649 denotes taste
T25 865-870 MESH:D012903 denotes smell
T26 896-900 HP:0012825 denotes mild
T27 908-915 HP:0002094 denotes dyspnea
T28 908-915 MESH:D004417 denotes dyspnea
T29 920-928 HP:0040282 denotes frequent
T30 935-941 HP:0012828 denotes severe
T32 1047-1062 MESH:D006296 denotes health services
T33 856-861 GO:0050909 denotes taste
T34 865-870 GO:0007608 denotes smell
T35 999-1015 MESH:D000086742 denotes diagnostic tests
T36 1133-1145 MESH:D062665 denotes surveillance
T37 1147-1157 MESH:D011322 denotes prevention
T38 1162-1171 MESH:D013812 denotes treatment
T39 322-369 MESH:D000086382 denotes severe acute respiratory syndrome coronavirus 2
T40 371-381 MESH:D000086382 denotes SARS-CoV-2
T41 322-369 HP:0033141 denotes severe acute respiratory syndrome coronavirus 2
T42 322-369 DOID:0080600 denotes severe acute respiratory syndrome coronavirus 2
T43 371-381 DOID:0080600 denotes SARS-CoV-2
T44 371-381 HP:0033141 denotes SARS-CoV-2
T45 685-690 HP:0001945 denotes fever
T46 818-843 HP:0012719 denotes gastrointestinal symptoms
T47 685-690 MESH:D005334 denotes fever
T48 612-618 MESH:D006262 denotes Health