PubMed:32348692
Annnotations
LitCovid-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-8 | SP_7 | denotes | COVID-19 |
| T2 | 17-22 | SO:0000704 | denotes | Genes |
| T3 | 26-32 | UBERON:0007311 | denotes | Sputum |
| T4 | 26-38 | CL:0008002 | denotes | Sputum Cells |
| T5 | 91-106 | CHEBI:50858 | denotes | Corticosteroids |
| T6 | 91-106 | CHEBI:50858 | denotes | Corticosteroids |
| T7 | 110-131 | NCBITaxon:11118 | denotes | CKGROUND: Coronavirus |
| T8 | 146-154 | SP_7 | denotes | COVID-19 |
| T9 | 169-173 | SP_10 | denotes | SARS |
| T10 | 174-185 | NCBITaxon:11118 | denotes | coronavirus |
| T11 | 189-199 | SP_7 | denotes | SARS-CoV-2 |
| T12 | 202-233 | PG_10 | denotes | Angiotensin converting enzyme 2 |
| T13 | 202-233 | PR:000003622 | denotes | Angiotensin converting enzyme 2 |
| T14 | 235-239 | G_3 | denotes | ACE2 |
| T15 | 235-239 | PG_10 | denotes | ACE2 |
| T16 | 235-239 | PR:000003622 | denotes | ACE2 |
| T17 | 245-258 | GO:0016020 | denotes | transmembrane |
| T18 | 245-276 | PG_8 | denotes | transmembrane protease serine 2 |
| T19 | 245-276 | PR:000016456 | denotes | transmembrane protease serine 2 |
| T20 | 278-285 | G_2 | denotes | TMPRSS2 |
| T21 | 278-285 | PR:000016456 | denotes | TMPRSS2 |
| T22 | 295-300 | NCBITaxon:10239 | denotes | viral |
| T23 | 358-362 | G_3 | denotes | ACE2 |
| T24 | 358-362 | PG_10 | denotes | ACE2 |
| T25 | 358-362 | PR:000003622 | denotes | ACE2 |
| T26 | 366-373 | G_2 | denotes | TMPRSS2 |
| T27 | 366-373 | PR:000016456 | denotes | TMPRSS2 |
| T28 | 374-378 | SO:0000704 | denotes | gene |
| T29 | 374-389 | GO:0010467 | denotes | gene expression |
| T30 | 393-399 | UBERON:0007311 | denotes | sputum |
| T31 | 393-405 | CL:0008002 | denotes | sputum cells |
| T32 | 463-470 | SP_7 | denotes | COVID19 |
| T33 | 503-507 | SO:0000704 | denotes | gene |
| T34 | 503-518 | GO:0010467 | denotes | gene expression |
| T35 | 523-527 | G_3 | denotes | ACE2 |
| T36 | 523-527 | PG_10 | denotes | ACE2 |
| T37 | 523-527 | PR:000003622 | denotes | ACE2 |
| T38 | 532-539 | G_2 | denotes | TMPRSS2 |
| T39 | 532-539 | PR:000016456 | denotes | TMPRSS2 |
| T40 | 549-582 | PR:000001467 | denotes | intercellular adhesion molecule 1 |
| T41 | 572-580 | CHEBI:36357 | denotes | molecule |
| T42 | 572-580 | CHEBI:36357 | denotes | molecule |
| T43 | 584-590 | PR:000001467 | denotes | ICAM-1 |
| T44 | 592-602 | NCBITaxon:11632 | denotes | rhinovirus |
| T45 | 633-639 | UBERON:0007311 | denotes | sputum |
| T46 | 742-746 | SO:0000704 | denotes | Gene |
| T47 | 742-757 | GO:0010467 | denotes | Gene expression |
| T48 | 761-765 | G_3 | denotes | ACE2 |
| T49 | 761-765 | PG_10 | denotes | ACE2 |
| T50 | 761-765 | PR:000003622 | denotes | ACE2 |
| T51 | 781-788 | G_2 | denotes | TMPRSS2 |
| T52 | 781-788 | PR:000016456 | denotes | TMPRSS2 |
| T53 | 794-804 | GO:0010467 | denotes | expression |
| T54 | 820-825 | SO:0000704 | denotes | genes |
| T55 | 981-991 | GO:0010467 | denotes | expression |
| T56 | 995-999 | G_3 | denotes | ACE2 |
| T57 | 995-999 | PG_10 | denotes | ACE2 |
| T58 | 995-999 | PR:000003622 | denotes | ACE2 |
| T59 | 1004-1011 | G_2 | denotes | TMPRSS2 |
| T60 | 1004-1011 | PR:000016456 | denotes | TMPRSS2 |
| T61 | 1028-1043 | CHEBI:50858 | denotes | corticosteroids |
| T62 | 1028-1043 | CHEBI:50858 | denotes | corticosteroids |
| T63 | 1076-1086 | GO:0010467 | denotes | expression |
| T64 | 1090-1094 | G_3 | denotes | ACE2 |
| T65 | 1090-1094 | PG_10 | denotes | ACE2 |
| T66 | 1090-1094 | PR:000003622 | denotes | ACE2 |
| T67 | 1099-1106 | G_2 | denotes | TMPRSS2 |
| T68 | 1099-1106 | PR:000016456 | denotes | TMPRSS2 |
| T69 | 1127-1150 | CHEBI:71418 | denotes | triamcinolone acetonide |
| T70 | 1127-1150 | CHEBI:71418 | denotes | triamcinolone acetonide |
| T71 | 1173-1183 | GO:0010467 | denotes | expression |
| T72 | 1194-1198 | SO:0000704 | denotes | gene |
| T73 | 1239-1245 | PR:000001467 | denotes | ICAM-1 |
| T74 | 1253-1257 | SO:0000704 | denotes | gene |
| T75 | 1253-1268 | GO:0010467 | denotes | gene expression |
| T76 | 1399-1409 | GO:0010467 | denotes | expression |
| T77 | 1413-1417 | G_3 | denotes | ACE2 |
| T78 | 1413-1417 | PG_10 | denotes | ACE2 |
| T79 | 1413-1417 | PR:000003622 | denotes | ACE2 |
| T80 | 1422-1429 | G_2 | denotes | TMPRSS2 |
| T81 | 1422-1429 | PR:000016456 | denotes | TMPRSS2 |
| T82 | 1518-1528 | GO:0065007 | denotes | monitoring |
| T83 | 1561-1568 | SP_7 | denotes | COVID19 |
| T84 | 1589-1599 | GO:0010467 | denotes | expression |
| T85 | 1603-1607 | G_3 | denotes | ACE2 |
| T86 | 1603-1607 | PG_10 | denotes | ACE2 |
| T87 | 1603-1607 | PR:000003622 | denotes | ACE2 |
| T88 | 1612-1619 | G_2 | denotes | TMPRSS2 |
| T89 | 1612-1619 | PR:000016456 | denotes | TMPRSS2 |
| T90 | 1717-1727 | SP_7 | denotes | SARS-CoV-2 |
| T91 | 1752-1759 | SP_7 | denotes | COVID19 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T1 | 26-32 | Body_part | denotes | Sputum | http://purl.org/sig/ont/fma/fma312401 |
| T2 | 33-38 | Body_part | denotes | Cells | http://purl.org/sig/ont/fma/fma68646 |
| T3 | 268-274 | Body_part | denotes | serine | http://purl.org/sig/ont/fma/fma82764 |
| T4 | 319-324 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T5 | 374-378 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
| T6 | 393-399 | Body_part | denotes | sputum | http://purl.org/sig/ont/fma/fma312401 |
| T7 | 400-405 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T8 | 503-507 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
| T9 | 584-588 | Body_part | denotes | ICAM | http://purl.org/sig/ont/fma/fma67857 |
| T10 | 633-639 | Body_part | denotes | sputum | http://purl.org/sig/ont/fma/fma312401 |
| T11 | 640-645 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T12 | 742-746 | Body_part | denotes | Gene | http://purl.org/sig/ont/fma/fma74402 |
| T13 | 1194-1198 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
| T14 | 1239-1243 | Body_part | denotes | ICAM | http://purl.org/sig/ont/fma/fma67857 |
| T15 | 1253-1257 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 26-32 | Body_part | denotes | Sputum | http://purl.obolibrary.org/obo/UBERON_0007311 |
| T2 | 393-399 | Body_part | denotes | sputum | http://purl.obolibrary.org/obo/UBERON_0007311 |
| T3 | 633-639 | Body_part | denotes | sputum | http://purl.obolibrary.org/obo/UBERON_0007311 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 0-8 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T2 | 42-48 | Disease | denotes | Asthma | http://purl.obolibrary.org/obo/MONDO_0004979 |
| T3 | 120-144 | Disease | denotes | Coronavirus disease 2019 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T4 | 146-154 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T5 | 169-185 | Disease | denotes | SARS-coronavirus | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T6 | 189-197 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T7 | 295-310 | Disease | denotes | viral infection | http://purl.obolibrary.org/obo/MONDO_0005108 |
| T8 | 301-310 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T9 | 412-418 | Disease | denotes | asthma | http://purl.obolibrary.org/obo/MONDO_0004979 |
| T10 | 463-470 | Disease | denotes | COVID19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T11 | 682-688 | Disease | denotes | Asthma | http://purl.obolibrary.org/obo/MONDO_0004979 |
| T12 | 841-847 | Disease | denotes | asthma | http://purl.obolibrary.org/obo/MONDO_0004979 |
| T13 | 866-872 | Disease | denotes | asthma | http://purl.obolibrary.org/obo/MONDO_0004979 |
| T14 | 935-952 | Disease | denotes | diabetes mellitus | http://purl.obolibrary.org/obo/MONDO_0005015 |
| T15 | 1045-1048 | Disease | denotes | ICS | http://purl.obolibrary.org/obo/MONDO_0016575 |
| T16 | 1152-1154 | Disease | denotes | TA | http://purl.obolibrary.org/obo/MONDO_0017991 |
| T17 | 1286-1292 | Disease | denotes | asthma | http://purl.obolibrary.org/obo/MONDO_0004979 |
| T18 | 1375-1378 | Disease | denotes | ICS | http://purl.obolibrary.org/obo/MONDO_0016575 |
| T19 | 1477-1494 | Disease | denotes | diabetes mellitus | http://purl.obolibrary.org/obo/MONDO_0005015 |
| T20 | 1535-1541 | Disease | denotes | asthma | http://purl.obolibrary.org/obo/MONDO_0004979 |
| T21 | 1561-1568 | Disease | denotes | COVID19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T22 | 1625-1628 | Disease | denotes | ICS | http://purl.obolibrary.org/obo/MONDO_0016575 |
| T23 | 1663-1666 | Disease | denotes | ICS | http://purl.obolibrary.org/obo/MONDO_0016575 |
| T24 | 1717-1725 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T25 | 1728-1737 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T26 | 1752-1759 | Disease | denotes | COVID19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T27 | 1952-1954 | Disease | denotes | nd | http://purl.obolibrary.org/obo/MONDO_0010691 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 17-22 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | Genes |
| T2 | 33-38 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | Cells |
| T3 | 319-324 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T4 | 374-378 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
| T5 | 400-405 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T6 | 503-507 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
| T7 | 615-616 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T8 | 640-645 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T9 | 742-746 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | Gene |
| T10 | 820-825 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | genes |
| T11 | 883-887 | http://purl.obolibrary.org/obo/UBERON_0003101 | denotes | male |
| T12 | 883-887 | http://www.ebi.ac.uk/efo/EFO_0000970 | denotes | male |
| T13 | 1194-1198 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
| T14 | 1253-1257 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
| T15 | 1433-1438 | http://purl.obolibrary.org/obo/UBERON_0003101 | denotes | males |
| T16 | 1433-1438 | http://www.ebi.ac.uk/efo/EFO_0000970 | denotes | males |
| T17 | 1674-1675 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T1 | 202-213 | Chemical | denotes | Angiotensin | http://purl.obolibrary.org/obo/CHEBI_2719 |
| T2 | 268-274 | Chemical | denotes | serine | http://purl.obolibrary.org/obo/CHEBI_17822 |
| T3 | 572-580 | Chemical | denotes | molecule | http://purl.obolibrary.org/obo/CHEBI_25367 |
| T4 | 883-887 | Chemical | denotes | male | http://purl.obolibrary.org/obo/CHEBI_30780 |
| T5 | 1028-1043 | Chemical | denotes | corticosteroids | http://purl.obolibrary.org/obo/CHEBI_50858 |
| T6 | 1127-1150 | Chemical | denotes | triamcinolone acetonide | http://purl.obolibrary.org/obo/CHEBI_71418 |
| T7 | 1127-1140 | Chemical | denotes | triamcinolone | http://purl.obolibrary.org/obo/CHEBI_9667 |
| T8 | 1152-1154 | Chemical | denotes | TA | http://purl.obolibrary.org/obo/CHEBI_74824|http://purl.obolibrary.org/obo/CHEBI_71418 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T1 | 42-48 | Phenotype | denotes | Asthma | http://purl.obolibrary.org/obo/HP_0002099 |
| T2 | 412-418 | Phenotype | denotes | asthma | http://purl.obolibrary.org/obo/HP_0002099 |
| T3 | 682-688 | Phenotype | denotes | Asthma | http://purl.obolibrary.org/obo/HP_0002099 |
| T4 | 841-847 | Phenotype | denotes | asthma | http://purl.obolibrary.org/obo/HP_0002099 |
| T5 | 866-872 | Phenotype | denotes | asthma | http://purl.obolibrary.org/obo/HP_0002099 |
| T6 | 935-952 | Phenotype | denotes | diabetes mellitus | http://purl.obolibrary.org/obo/HP_0000819 |
| T7 | 1286-1292 | Phenotype | denotes | asthma | http://purl.obolibrary.org/obo/HP_0002099 |
| T8 | 1477-1494 | Phenotype | denotes | diabetes mellitus | http://purl.obolibrary.org/obo/HP_0000819 |
| T9 | 1535-1541 | Phenotype | denotes | asthma | http://purl.obolibrary.org/obo/HP_0002099 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 295-310 | http://purl.obolibrary.org/obo/GO_0016032 | denotes | viral infection |
| T2 | 374-389 | http://purl.obolibrary.org/obo/GO_0010467 | denotes | gene expression |
| T3 | 503-518 | http://purl.obolibrary.org/obo/GO_0010467 | denotes | gene expression |
| T4 | 742-757 | http://purl.obolibrary.org/obo/GO_0010467 | denotes | Gene expression |
| T5 | 1253-1268 | http://purl.obolibrary.org/obo/GO_0010467 | denotes | gene expression |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-49 | Sentence | denotes | COVID-19 Related Genes in Sputum Cells in Asthma: |
| T2 | 50-107 | Sentence | denotes | Relationship to Demographic Features and Corticosteroids. |
| T3 | 108-119 | Sentence | denotes | BACKGROUND: |
| T4 | 120-201 | Sentence | denotes | Coronavirus disease 2019 (COVID-19) is caused by SARS-coronavirus 2 (SARS-CoV-2). |
| T5 | 202-325 | Sentence | denotes | Angiotensin converting enzyme 2 (ACE2) and transmembrane protease serine 2 (TMPRSS2) mediate viral infection of host cells. |
| T6 | 326-481 | Sentence | denotes | We reasoned that differences in ACE2 or TMPRSS2 gene expression in sputum cells among asthma patients may identify subgroups at risk for COVID19 morbidity. |
| T7 | 482-490 | Sentence | denotes | METHODS: |
| T8 | 491-732 | Sentence | denotes | We analyzed gene expression for ACE2 and TMPRSS2, and for intercellular adhesion molecule 1 (ICAM-1)(rhinovirus receptor as a comparator), in sputum cells from 330 participants in the Severe Asthma Research Program-3 and 79 healthy controls. |
| T9 | 733-741 | Sentence | denotes | RESULTS: |
| T10 | 742-859 | Sentence | denotes | Gene expression of ACE2 was lower than TMPRSS2, and expression levels of both genes was similar in asthma and health. |
| T11 | 860-1012 | Sentence | denotes | Among asthma patients, male gender, African Americans race, and history of diabetes mellitus, was associated with higher expression of ACE2 and TMPRSS2. |
| T12 | 1013-1199 | Sentence | denotes | Use of inhaled corticosteroids (ICS) was associated with lower expression of ACE2 and TMPRSS2, but treatment with triamcinolone acetonide (TA) did not decrease expression of either gene. |
| T13 | 1200-1379 | Sentence | denotes | These findings differed from those for ICAM-1, where gene expression was increased in asthma and less consistent differences were observed related to gender, race, and use of ICS. |
| T14 | 1380-1391 | Sentence | denotes | CONCLUSION: |
| T15 | 1392-1578 | Sentence | denotes | Higher expression of ACE2 and TMPRSS2 in males, African Americans, and patients with diabetes mellitus provides rationale for monitoring these asthma subgroups for poor COVID19 outcomes. |
| T16 | 1579-1770 | Sentence | denotes | The lower expression of ACE2 and TMPRSS2 with ICS use warrants prospective study of ICS use as a predictor of decreased susceptibility to SARS-CoV-2 infection and decreased COVID19 morbidity. |
| T17 | 1771-1961 | Sentence | denotes | This article is open access and distributed under the terms of the Creative Commons Attribution Non-Commercial No Derivatives License 4.0 (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
sonoma2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T0 | 0-17 | DISEASE | denotes | COVID-19 Related |
| T1 | 42-48 | DISEASE | denotes | Asthma |
| T2 | 50-63 | REG | denotes | Relationship |
| T3 | 120-140 | DISEASE | denotes | Coronavirus disease |
| T4 | 146-154 | DISEASE | denotes | COVID-19 |
| T5 | 159-166 | REG | denotes | caused |
| T6 | 169-188 | DISEASE | denotes | SARS-coronavirus 2 |
| T10 | 245-277 | GENE | denotes | transmembrane protease serine 2 |
| T11 | 287-295 | REG | denotes | mediate |
| T12 | 295-311 | DISEASE | denotes | viral infection |
| T13 | 343-355 | REG | denotes | differences |
| T14 | 358-363 | GENE | denotes | ACE2 |
| T15 | 366-374 | GENE | denotes | TMPRSS2 |
| T16 | 379-390 | MPA | denotes | expression |
| T18 | 463-480 | DISEASE | denotes | COVID19 morbidity |
| T19 | 463-471 | DISEASE | denotes | COVID19 |
| T25 | 508-519 | MPA | denotes | expression |
| T26 | 523-528 | GENE | denotes | ACE2 |
| T27 | 532-539 | GENE | denotes | TMPRSS2 |
| T31 | 563-583 | GENE | denotes | adhesion molecule 1 |
| T32 | 747-758 | MPA | denotes | expression |
| T33 | 761-766 | GENE | denotes | ACE2 |
| T34 | 770-776 | NEGREG | denotes | lower |
| T35 | 781-788 | GENE | denotes | TMPRSS2 |
| T36 | 794-805 | MPA | denotes | expression |
| T37 | 805-812 | MPA | denotes | levels |
| T38 | 841-848 | DISEASE | denotes | asthma |
| T40 | 935-952 | DISEASE | denotes | diabetes mellitus |
| T41 | 958-969 | REG | denotes | associated |
| T42 | 974-981 | POSREG | denotes | higher |
| T43 | 981-992 | MPA | denotes | expression |
| T44 | 995-1000 | GENE | denotes | ACE2 |
| T45 | 1004-1011 | GENE | denotes | TMPRSS2 |
| T46 | 1054-1065 | REG | denotes | associated |
| T47 | 1070-1076 | NEGREG | denotes | lower |
| T48 | 1076-1087 | MPA | denotes | expression |
| T49 | 1090-1095 | GENE | denotes | ACE2 |
| T50 | 1099-1106 | GENE | denotes | TMPRSS2 |
| T51 | 1164-1173 | NEGREG | denotes | decrease |
| T52 | 1173-1184 | MPA | denotes | expression |
| T53 | 1239-1245 | GENE | denotes | ICAM-1 |
| T54 | 1258-1269 | MPA | denotes | expression |
| T55 | 1273-1283 | POSREG | denotes | increased |
| T56 | 1286-1293 | DISEASE | denotes | asthma |
| T57 | 1313-1325 | REG | denotes | differences |
| T58 | 1392-1399 | POSREG | denotes | Higher |
| T59 | 1399-1410 | MPA | denotes | expression |
| T60 | 1413-1418 | GENE | denotes | ACE2 |
| T61 | 1422-1430 | GENE | denotes | TMPRSS2 |
| T62 | 1477-1495 | DISEASE | denotes | diabetes mellitus |
| T63 | 1535-1542 | DISEASE | denotes | asthma |
| T64 | 1561-1569 | DISEASE | denotes | COVID19 |
| T65 | 1583-1589 | NEGREG | denotes | lower |
| T66 | 1589-1600 | MPA | denotes | expression |
| T67 | 1603-1608 | GENE | denotes | ACE2 |
| T68 | 1612-1620 | GENE | denotes | TMPRSS2 |
| T69 | 1676-1686 | REG | denotes | predictor |
| T70 | 1689-1699 | NEGREG | denotes | decreased |
| T71 | 1699-1714 | MPA | denotes | susceptibility |
| T72 | 1717-1738 | DISEASE | denotes | SARS-CoV-2 infection |
| T73 | 1742-1752 | NEGREG | denotes | decreased |
| T74 | 1752-1769 | DISEASE | denotes | COVID19 morbidity |
| T75 | 1752-1760 | DISEASE | denotes | COVID19 |
| R0 | T1 | T2 | ThemeOf | Asthma,Relationship |
| R1 | T3 | T5 | ThemeOf | Coronavirus disease ,caused |
| R2 | T3 | T11 | ThemeOf | Coronavirus disease ,mediate |
| R3 | T4 | T5 | ThemeOf | COVID-19,caused |
| R4 | T4 | T11 | ThemeOf | COVID-19,mediate |
| R5 | T6 | T5 | ThemeOf | SARS-coronavirus 2 ,caused |
| R6 | T6 | T11 | ThemeOf | SARS-coronavirus 2 ,mediate |
| R9 | T16 | T13 | ThemeOf | expression ,differences |
| R10 | T14 | T16 | ThemeOf | ACE2 ,expression |
| R11 | T15 | T13 | ThemeOf | TMPRSS2 ,differences |
| R12 | T15 | T16 | ThemeOf | TMPRSS2 ,expression |
| R20 | T26 | T25 | ThemeOf | ACE2 ,expression |
| R21 | T27 | T25 | ThemeOf | TMPRSS2,expression |
| R24 | T31 | T25 | ThemeOf | adhesion molecule 1 ,expression |
| R25 | T32 | T34 | ThemeOf | expression ,lower |
| R26 | T33 | T32 | ThemeOf | ACE2 ,expression |
| R27 | T35 | T32 | ThemeOf | TMPRSS2,expression |
| R28 | T36 | T34 | ThemeOf | expression ,lower |
| R29 | T36 | T37 | ThemeOf | expression ,levels |
| R30 | T37 | T34 | ThemeOf | levels ,lower |
| R31 | T38 | T34 | ThemeOf | asthma ,lower |
| R32 | T38 | T37 | ThemeOf | asthma ,levels |
| R34 | T43 | T41 | ThemeOf | expression ,associated |
| R35 | T43 | T42 | ThemeOf | expression ,higher |
| R36 | T44 | T43 | ThemeOf | ACE2 ,expression |
| R37 | T45 | T43 | ThemeOf | TMPRSS2,expression |
| R38 | T48 | T47 | ThemeOf | expression ,lower |
| R39 | T49 | T48 | ThemeOf | ACE2 ,expression |
| R40 | T50 | T48 | ThemeOf | TMPRSS2,expression |
| R41 | T52 | T51 | ThemeOf | expression ,decrease |
| R42 | T54 | T55 | ThemeOf | expression ,increased |
| R43 | T56 | T55 | ThemeOf | asthma ,increased |
| R44 | T56 | T57 | ThemeOf | asthma ,differences |
| R45 | T59 | T58 | ThemeOf | expression ,Higher |
| R46 | T60 | T59 | ThemeOf | ACE2 ,expression |
| R47 | T61 | T59 | ThemeOf | TMPRSS2 ,expression |
| R48 | T63 | T65 | ThemeOf | asthma ,lower |
| R49 | T66 | T65 | ThemeOf | expression ,lower |
| R50 | T67 | T66 | ThemeOf | ACE2 ,expression |
| R51 | T68 | T66 | ThemeOf | TMPRSS2 ,expression |
| R52 | T71 | T69 | ThemeOf | susceptibility ,predictor |
| R53 | T71 | T70 | ThemeOf | susceptibility ,decreased |
| R54 | T71 | T73 | ThemeOf | susceptibility ,decreased |
| R55 | T74 | T69 | ThemeOf | COVID19 morbidity,predictor |
| R56 | T74 | T70 | ThemeOf | COVID19 morbidity,decreased |
| R57 | T74 | T73 | ThemeOf | COVID19 morbidity,decreased |
sonoma
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T-0 | 42-48 | DISEASE | denotes | Asthma |
| T-1 | 50-62 | REG | denotes | Relationship |
| T-2 | 159-165 | REG | denotes | caused |
| T-5 | 287-294 | REG | denotes | mediate |
| T-6 | 343-354 | REG | denotes | differences |
| T-7 | 358-362 | GENE | denotes | ACE2 |
| T-8 | 366-373 | GENE | denotes | TMPRSS2 |
| T-10 | 432-440 | REG | denotes | identify |
| T-11 | 454-458 | REG | denotes | risk |
| T-17 | 523-527 | GENE | denotes | ACE2 |
| T-18 | 532-539 | GENE | denotes | TMPRSS2 |
| T-20 | 761-765 | GENE | denotes | ACE2 |
| T-21 | 770-775 | NEGREG | denotes | lower |
| T-22 | 781-788 | GENE | denotes | TMPRSS2 |
| T-23 | 841-847 | DISEASE | denotes | asthma |
| T-25 | 935-943 | DISEASE | denotes | diabetes |
| T-26 | 958-968 | REG | denotes | associated |
| T-27 | 981-991 | MPA | denotes | expression |
| T-28 | 995-999 | GENE | denotes | ACE2 |
| T-29 | 1004-1011 | GENE | denotes | TMPRSS2 |
| T-30 | 1054-1064 | REG | denotes | associated |
| T-31 | 1070-1075 | NEGREG | denotes | lower |
| T-32 | 1076-1086 | MPA | denotes | expression |
| T-33 | 1090-1094 | GENE | denotes | ACE2 |
| T-34 | 1099-1106 | GENE | denotes | TMPRSS2 |
| T-35 | 1164-1172 | NEGREG | denotes | decrease |
| T-36 | 1173-1183 | MPA | denotes | expression |
| T-37 | 1239-1245 | GENE | denotes | ICAM-1 |
| T-38 | 1258-1268 | MPA | denotes | expression |
| T-39 | 1286-1292 | DISEASE | denotes | asthma |
| T-40 | 1399-1409 | MPA | denotes | expression |
| T-41 | 1413-1417 | GENE | denotes | ACE2 |
| T-42 | 1422-1429 | GENE | denotes | TMPRSS2 |
| T-43 | 1535-1541 | DISEASE | denotes | asthma |
| T-44 | 1556-1560 | NEGREG | denotes | poor |
| T-45 | 1583-1588 | NEGREG | denotes | lower |
| T-46 | 1589-1599 | MPA | denotes | expression |
| T-47 | 1603-1607 | GENE | denotes | ACE2 |
| T-48 | 1612-1619 | GENE | denotes | TMPRSS2 |
| T-49 | 1676-1685 | REG | denotes | predictor |
| T-50 | 1689-1698 | NEGREG | denotes | decreased |
| T-51 | 1742-1751 | NEGREG | denotes | decreased |
| R-2 | T-6 | T-7 | ThemeOf | differences,ACE2 |
| R-3 | T-6 | T-8 | ThemeOf | differences,TMPRSS2 |
| R-5 | T-6 | T-10 | ThemeOf | differences,identify |
| R-6 | T-6 | T-11 | ThemeOf | differences,risk |
| R-11 | T-10 | T-11 | ThemeOf | identify,risk |
| R-21 | T-20 | T-21 | ThemeOf | ACE2,lower |
| R-22 | T-20 | T-23 | ThemeOf | ACE2,asthma |
| R-23 | T-21 | T-22 | ThemeOf | lower,TMPRSS2 |
| R-24 | T-21 | T-23 | ThemeOf | lower,asthma |
| R-25 | T-22 | T-23 | ThemeOf | TMPRSS2,asthma |
| R-48 | T-32 | T-34 | ThemeOf | expression,TMPRSS2 |
| R-49 | T-35 | T-36 | ThemeOf | decrease,expression |
| R-50 | T-38 | T-39 | ThemeOf | expression,asthma |
| R-51 | T-40 | T-41 | ThemeOf | expression,ACE2 |
| R-52 | T-40 | T-42 | ThemeOf | expression,TMPRSS2 |
| R-53 | T-40 | T-43 | ThemeOf | expression,asthma |
| R-54 | T-40 | T-44 | ThemeOf | expression,poor |
| R-55 | T-41 | T-43 | ThemeOf | ACE2,asthma |
| R-56 | T-41 | T-44 | ThemeOf | ACE2,poor |
| R-57 | T-42 | T-43 | ThemeOf | TMPRSS2,asthma |
| R-58 | T-42 | T-44 | ThemeOf | TMPRSS2,poor |
| R-59 | T-43 | T-44 | ThemeOf | asthma,poor |
| R-60 | T-45 | T-46 | ThemeOf | lower,expression |
| R-61 | T-45 | T-47 | ThemeOf | lower,ACE2 |
| R-62 | T-45 | T-48 | ThemeOf | lower,TMPRSS2 |
| R-63 | T-45 | T-49 | ThemeOf | lower,predictor |
| R-64 | T-45 | T-50 | ThemeOf | lower,decreased |
| R-65 | T-45 | T-51 | ThemeOf | lower,decreased |
| R-66 | T-46 | T-47 | ThemeOf | expression,ACE2 |
| R-67 | T-46 | T-48 | ThemeOf | expression,TMPRSS2 |
| R-68 | T-46 | T-49 | ThemeOf | expression,predictor |
| R-69 | T-46 | T-50 | ThemeOf | expression,decreased |
| R-70 | T-46 | T-51 | ThemeOf | expression,decreased |
| R-71 | T-47 | T-49 | ThemeOf | ACE2,predictor |
| R-72 | T-47 | T-50 | ThemeOf | ACE2,decreased |
| R-73 | T-48 | T-49 | ThemeOf | TMPRSS2,predictor |
| R-74 | T-48 | T-50 | ThemeOf | TMPRSS2,decreased |
| R-75 | T-48 | T-51 | ThemeOf | TMPRSS2,decreased |
| R-76 | T-49 | T-50 | ThemeOf | predictor,decreased |
| R-77 | T-49 | T-51 | ThemeOf | predictor,decreased |
| R-78 | T-50 | T-51 | ThemeOf | decreased,decreased |
| R-31 | T-25 | T-26 | ThemeOf | diabetes,associated |
| R-32 | T-25 | T-27 | ThemeOf | diabetes,expression |
| R-33 | T-25 | T-28 | ThemeOf | diabetes,ACE2 |
| R-34 | T-25 | T-29 | ThemeOf | diabetes,TMPRSS2 |
| R-35 | T-26 | T-27 | ThemeOf | associated,expression |
| R-36 | T-26 | T-28 | ThemeOf | associated,ACE2 |
| R-37 | T-26 | T-29 | ThemeOf | associated,TMPRSS2 |
| R-38 | T-27 | T-28 | ThemeOf | expression,ACE2 |
| R-39 | T-27 | T-29 | ThemeOf | expression,TMPRSS2 |
| R-40 | T-30 | T-31 | ThemeOf | associated,lower |
| R-41 | T-30 | T-32 | ThemeOf | associated,expression |
| R-42 | T-30 | T-33 | ThemeOf | associated,ACE2 |
| R-43 | T-30 | T-34 | ThemeOf | associated,TMPRSS2 |
| R-44 | T-31 | T-32 | ThemeOf | lower,expression |
| R-45 | T-31 | T-33 | ThemeOf | lower,ACE2 |
| R-46 | T-31 | T-34 | ThemeOf | lower,TMPRSS2 |
| R-47 | T-32 | T-33 | ThemeOf | expression,ACE2 |