PubMed:32245909 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/32245909","sourcedb":"PubMed","sourceid":"32245909","source_url":"https://www.ncbi.nlm.nih.gov/pubmed/32245909","text":"A fatal case of COVID-19 pneumonia occurring in a patient with severe acute ulcerative colitis.\n","tracks":[{"project":"LitCovid-OGER-BB","denotations":[{"id":"T1","span":{"begin":16,"end":24},"obj":"SP_7"}],"namespaces":[{"prefix":"NCBITaxon","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"}],"attributes":[{"subj":"T1","pred":"source","obj":"LitCovid-OGER-BB"}]},{"project":"LitCovid-sentences-v1","denotations":[{"id":"TextSentencer_T1","span":{"begin":0,"end":95},"obj":"Sentence"}],"attributes":[{"subj":"TextSentencer_T1","pred":"source","obj":"LitCovid-sentences-v1"}]},{"project":"LitCovid-TimeML","denotations":[{"id":"tok1","span":{"begin":0,"end":1},"obj":"DT"},{"id":"tok2","span":{"begin":2,"end":7},"obj":"JJ"},{"id":"tok3","span":{"begin":8,"end":12},"obj":"NN"},{"id":"tok4","span":{"begin":13,"end":15},"obj":"IN"},{"id":"tok5","span":{"begin":16,"end":22},"obj":"NNP"},{"id":"tok6","span":{"begin":22,"end":24},"obj":"CD"},{"id":"tok7","span":{"begin":25,"end":34},"obj":"NN"},{"id":"tok8","span":{"begin":35,"end":44},"obj":"VBG"},{"id":"tok9","span":{"begin":45,"end":47},"obj":"IN"},{"id":"tok10","span":{"begin":48,"end":49},"obj":"DT"},{"id":"tok11","span":{"begin":50,"end":57},"obj":"NN"},{"id":"tok12","span":{"begin":58,"end":62},"obj":"IN"},{"id":"tok13","span":{"begin":63,"end":69},"obj":"JJ"},{"id":"tok14","span":{"begin":70,"end":75},"obj":"JJ"},{"id":"tok15","span":{"begin":76,"end":86},"obj":"JJ"},{"id":"tok16","span":{"begin":87,"end":94},"obj":"NNS"},{"id":"tok17","span":{"begin":94,"end":95},"obj":"."},{"id":"lookup1","span":{"begin":45,"end":47},"obj":"country_code"},{"id":"event1","span":{"begin":35,"end":44},"obj":"OCCURRENCE"}],"attributes":[{"subj":"tok1","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok2","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok3","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok4","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok5","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok6","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok7","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok8","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok9","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok10","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok11","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok12","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok13","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok14","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok15","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok16","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok17","pred":"source","obj":"LitCovid-TimeML"},{"subj":"lookup1","pred":"source","obj":"LitCovid-TimeML"},{"subj":"event1","pred":"source","obj":"LitCovid-TimeML"}]},{"project":"LitCovid-PD-MONDO-v1","denotations":[{"id":"T1","span":{"begin":16,"end":24},"obj":"Disease"},{"id":"T2","span":{"begin":25,"end":34},"obj":"Disease"},{"id":"T3","span":{"begin":76,"end":94},"obj":"Disease"},{"id":"T5","span":{"begin":76,"end":86},"obj":"Disease"},{"id":"T6","span":{"begin":87,"end":94},"obj":"Disease"}],"attributes":[{"id":"A1","pred":"mondo_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A2","pred":"mondo_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/MONDO_0005249"},{"id":"A3","pred":"mondo_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/MONDO_0005101"},{"id":"A4","pred":"mondo_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/MONDO_0009960"},{"id":"A5","pred":"mondo_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/MONDO_0043839"},{"id":"A6","pred":"mondo_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/MONDO_0005292"},{"subj":"T1","pred":"source","obj":"LitCovid-PD-MONDO-v1"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-MONDO-v1"},{"subj":"T3","pred":"source","obj":"LitCovid-PD-MONDO-v1"},{"subj":"T5","pred":"source","obj":"LitCovid-PD-MONDO-v1"},{"subj":"T6","pred":"source","obj":"LitCovid-PD-MONDO-v1"}]},{"project":"LitCovid-PD-HP-v1","denotations":[{"id":"T1","span":{"begin":25,"end":34},"obj":"Phenotype"},{"id":"T2","span":{"begin":76,"end":94},"obj":"Phenotype"}],"attributes":[{"id":"A1","pred":"hp_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/HP_0002090"},{"id":"A2","pred":"hp_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/HP_0100279"},{"subj":"T1","pred":"source","obj":"LitCovid-PD-HP-v1"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-HP-v1"}]},{"project":"LitCovid-PD-HP","denotations":[{"id":"T1","span":{"begin":25,"end":34},"obj":"Phenotype"},{"id":"T2","span":{"begin":76,"end":94},"obj":"Phenotype"}],"attributes":[{"id":"A1","pred":"hp_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/HP_0002090"},{"id":"A2","pred":"hp_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/HP_0100279"},{"subj":"T1","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-HP"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T1","span":{"begin":16,"end":24},"obj":"Disease"},{"id":"T2","span":{"begin":25,"end":34},"obj":"Disease"},{"id":"T3","span":{"begin":76,"end":94},"obj":"Disease"},{"id":"T5","span":{"begin":76,"end":86},"obj":"Disease"},{"id":"T6","span":{"begin":87,"end":94},"obj":"Disease"}],"attributes":[{"id":"A1","pred":"mondo_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A2","pred":"mondo_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/MONDO_0005249"},{"id":"A3","pred":"mondo_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/MONDO_0005101"},{"id":"A4","pred":"mondo_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/MONDO_0009960"},{"id":"A5","pred":"mondo_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/MONDO_0043839"},{"id":"A6","pred":"mondo_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/MONDO_0005292"},{"subj":"T1","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T3","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T5","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T6","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T1","span":{"begin":0,"end":1},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T2","span":{"begin":48,"end":49},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"attributes":[{"subj":"T1","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T1","span":{"begin":0,"end":95},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T1","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"3","span":{"begin":16,"end":34},"obj":"Disease"},{"id":"4","span":{"begin":50,"end":57},"obj":"Species"},{"id":"5","span":{"begin":76,"end":94},"obj":"Disease"}],"attributes":[{"id":"A3","pred":"tao:has_database_id","subj":"3","obj":"MESH:C000657245"},{"id":"A4","pred":"tao:has_database_id","subj":"4","obj":"Tax:9606"},{"id":"A5","pred":"tao:has_database_id","subj":"5","obj":"MESH:D003093"},{"subj":"3","pred":"source","obj":"LitCovid-PubTator"},{"subj":"4","pred":"source","obj":"LitCovid-PubTator"},{"subj":"5","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]},{"project":"Inflammaging","denotations":[{"id":"T1","span":{"begin":0,"end":95},"obj":"Sentence"},{"id":"T1","span":{"begin":0,"end":95},"obj":"Sentence"}],"attributes":[{"subj":"T1","pred":"source","obj":"Inflammaging"},{"subj":"T1","pred":"source","obj":"Inflammaging"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-OGER-BB","color":"#93cfec","default":true},{"id":"LitCovid-sentences-v1","color":"#e9ec93"},{"id":"LitCovid-TimeML","color":"#d493ec"},{"id":"LitCovid-PD-MONDO-v1","color":"#93ecba"},{"id":"LitCovid-PD-HP-v1","color":"#eca093"},{"id":"LitCovid-PD-HP","color":"#939fec"},{"id":"LitCovid-PD-MONDO","color":"#b9ec93"},{"id":"LitCovid-PD-CLO","color":"#ec93d3"},{"id":"LitCovid-sentences","color":"#93eceb"},{"id":"LitCovid-PubTator","color":"#ecd093"},{"id":"Inflammaging","color":"#b693ec"}]}]}}