PubMed:32217834 / 437-609 JSONTXT

{"project":"LitCovid-sentences-v1","denotations":[{"id":"TextSentencer_T6","span":{"begin":0,"end":172},"obj":"Sentence"}],"text":"Increased cytokine levels (IL-6, IL-10 and TNFα), lymphopenia (in CD4+ and CD8+ T cells), and decreased IFNγ expression in CD4+ T cells are associated with severe COVID-19."}

{"project":"LitCovid-PD-HP-v1","denotations":[{"id":"T2","span":{"begin":50,"end":61},"obj":"Phenotype"}],"attributes":[{"id":"A2","pred":"hp_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/HP_0001888"}],"text":"Increased cytokine levels (IL-6, IL-10 and TNFα), lymphopenia (in CD4+ and CD8+ T cells), and decreased IFNγ expression in CD4+ T cells are associated with severe COVID-19."}

{"project":"LitCovid-PD-MONDO-v1","denotations":[{"id":"T8","span":{"begin":50,"end":61},"obj":"Disease"},{"id":"T9","span":{"begin":163,"end":171},"obj":"Disease"}],"attributes":[{"id":"A8","pred":"mondo_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/MONDO_0003783"},{"id":"A9","pred":"mondo_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"}],"text":"Increased cytokine levels (IL-6, IL-10 and TNFα), lymphopenia (in CD4+ and CD8+ T cells), and decreased IFNγ expression in CD4+ T cells are associated with severe COVID-19."}

{"project":"LitCovid-PD-FMA-UBERON-v1","denotations":[{"id":"T1","span":{"begin":10,"end":18},"obj":"Body_part"},{"id":"T2","span":{"begin":82,"end":87},"obj":"Body_part"},{"id":"T3","span":{"begin":130,"end":135},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"fma_id","subj":"T1","obj":"http://purl.org/sig/ont/fma/fma84050"},{"id":"A2","pred":"fma_id","subj":"T2","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A3","pred":"fma_id","subj":"T3","obj":"http://purl.org/sig/ont/fma/fma68646"}],"text":"Increased cytokine levels (IL-6, IL-10 and TNFα), lymphopenia (in CD4+ and CD8+ T cells), and decreased IFNγ expression in CD4+ T cells are associated with severe COVID-19."}

{"project":"LitCovid-OGER-BB","denotations":[{"id":"T10","span":{"begin":27,"end":31},"obj":"PR:000001393"},{"id":"T11","span":{"begin":33,"end":38},"obj":"PR:000001471"},{"id":"T12","span":{"begin":43,"end":47},"obj":"PR:000000134"},{"id":"T13","span":{"begin":66,"end":69},"obj":"PR:000001004"},{"id":"T14","span":{"begin":80,"end":87},"obj":"CL:0000084"},{"id":"T15","span":{"begin":104,"end":108},"obj":"PR:000000017"},{"id":"T16","span":{"begin":109,"end":119},"obj":"GO:0010467"},{"id":"T17","span":{"begin":123,"end":126},"obj":"PR:000001004"},{"id":"T18","span":{"begin":128,"end":135},"obj":"CL:0000084"},{"id":"T19","span":{"begin":163,"end":171},"obj":"SP_7"}],"namespaces":[{"prefix":"NCBITaxon","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"}],"text":"Increased cytokine levels (IL-6, IL-10 and TNFα), lymphopenia (in CD4+ and CD8+ T cells), and decreased IFNγ expression in CD4+ T cells are associated with severe COVID-19."}

{"project":"LitCovid-TimeML","denotations":[{"id":"tok76","span":{"begin":0,"end":9},"obj":"VBN"},{"id":"tok77","span":{"begin":10,"end":18},"obj":"NN"},{"id":"tok78","span":{"begin":19,"end":25},"obj":"NNS"},{"id":"tok79","span":{"begin":26,"end":27},"obj":"("},{"id":"tok80","span":{"begin":27,"end":30},"obj":"NNP"},{"id":"tok81","span":{"begin":30,"end":31},"obj":"CD"},{"id":"tok82","span":{"begin":31,"end":32},"obj":","},{"id":"tok83","span":{"begin":33,"end":36},"obj":"NNP"},{"id":"tok84","span":{"begin":36,"end":38},"obj":"CD"},{"id":"tok85","span":{"begin":39,"end":42},"obj":"CC"},{"id":"tok86","span":{"begin":43,"end":47},"obj":"NNP"},{"id":"tok87","span":{"begin":47,"end":48},"obj":")"},{"id":"tok88","span":{"begin":48,"end":49},"obj":","},{"id":"tok89","span":{"begin":50,"end":61},"obj":"NN"},{"id":"tok90","span":{"begin":62,"end":63},"obj":"("},{"id":"tok91","span":{"begin":63,"end":65},"obj":"IN"},{"id":"tok92","span":{"begin":66,"end":68},"obj":"NNP"},{"id":"tok93","span":{"begin":68,"end":69},"obj":"CD"},{"id":"tok94","span":{"begin":69,"end":70},"obj":"NN"},{"id":"tok95","span":{"begin":71,"end":74},"obj":"CC"},{"id":"tok96","span":{"begin":75,"end":77},"obj":"NNP"},{"id":"tok97","span":{"begin":77,"end":78},"obj":"CD"},{"id":"tok98","span":{"begin":78,"end":79},"obj":"NN"},{"id":"tok99","span":{"begin":80,"end":81},"obj":"NN"},{"id":"tok100","span":{"begin":82,"end":87},"obj":"NNS"},{"id":"tok101","span":{"begin":87,"end":88},"obj":")"},{"id":"tok102","span":{"begin":88,"end":89},"obj":","},{"id":"tok103","span":{"begin":90,"end":93},"obj":"CC"},{"id":"tok104","span":{"begin":94,"end":103},"obj":"VBD"},{"id":"tok105","span":{"begin":104,"end":108},"obj":"NNP"},{"id":"tok106","span":{"begin":109,"end":119},"obj":"NN"},{"id":"tok107","span":{"begin":120,"end":122},"obj":"IN"},{"id":"tok108","span":{"begin":123,"end":125},"obj":"NNP"},{"id":"tok109","span":{"begin":125,"end":126},"obj":"CD"},{"id":"tok110","span":{"begin":126,"end":127},"obj":"NN"},{"id":"tok111","span":{"begin":128,"end":129},"obj":"NN"},{"id":"tok112","span":{"begin":130,"end":135},"obj":"NNS"},{"id":"tok113","span":{"begin":136,"end":139},"obj":"VBP"},{"id":"tok114","span":{"begin":140,"end":150},"obj":"VBN"},{"id":"tok115","span":{"begin":151,"end":155},"obj":"IN"},{"id":"tok116","span":{"begin":156,"end":162},"obj":"JJ"},{"id":"tok117","span":{"begin":163,"end":169},"obj":"NNP"},{"id":"tok118","span":{"begin":169,"end":171},"obj":"CD"},{"id":"tok119","span":{"begin":171,"end":172},"obj":"."},{"id":"lookup7","span":{"begin":27,"end":29},"obj":"state"},{"id":"lookup8","span":{"begin":33,"end":35},"obj":"state"},{"id":"lookup9","span":{"begin":63,"end":65},"obj":"country_code"},{"id":"lookup10","span":{"begin":120,"end":122},"obj":"country_code"},{"id":"event3","span":{"begin":94,"end":103},"obj":"OCCURRENCE"}],"text":"Increased cytokine levels (IL-6, IL-10 and TNFα), lymphopenia (in CD4+ and CD8+ T cells), and decreased IFNγ expression in CD4+ T cells are associated with severe COVID-19."}

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T1","span":{"begin":10,"end":18},"obj":"Body_part"},{"id":"T2","span":{"begin":82,"end":87},"obj":"Body_part"},{"id":"T3","span":{"begin":130,"end":135},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"fma_id","subj":"T1","obj":"http://purl.org/sig/ont/fma/fma84050"},{"id":"A2","pred":"fma_id","subj":"T2","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A3","pred":"fma_id","subj":"T3","obj":"http://purl.org/sig/ont/fma/fma68646"}],"text":"Increased cytokine levels (IL-6, IL-10 and TNFα), lymphopenia (in CD4+ and CD8+ T cells), and decreased IFNγ expression in CD4+ T cells are associated with severe COVID-19."}

{"project":"LitCovid_AGAC","denotations":[{"id":"p118490s0","span":{"begin":0,"end":9},"obj":"PosReg"},{"id":"p118490s1","span":{"begin":10,"end":18},"obj":"MPA"},{"id":"p118490s28","span":{"begin":94,"end":103},"obj":"NegReg"},{"id":"p118490s29","span":{"begin":104,"end":108},"obj":"Protein"},{"id":"p118490s30","span":{"begin":109,"end":119},"obj":"MPA"}],"text":"Increased cytokine levels (IL-6, IL-10 and TNFα), lymphopenia (in CD4+ and CD8+ T cells), and decreased IFNγ expression in CD4+ T cells are associated with severe COVID-19."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T8","span":{"begin":50,"end":61},"obj":"Disease"},{"id":"T9","span":{"begin":163,"end":171},"obj":"Disease"}],"attributes":[{"id":"A8","pred":"mondo_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/MONDO_0003783"},{"id":"A9","pred":"mondo_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"}],"text":"Increased cytokine levels (IL-6, IL-10 and TNFα), lymphopenia (in CD4+ and CD8+ T cells), and decreased IFNγ expression in CD4+ T cells are associated with severe COVID-19."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T2","span":{"begin":66,"end":69},"obj":"http://purl.obolibrary.org/obo/PR_000001004"},{"id":"T3","span":{"begin":75,"end":78},"obj":"http://purl.obolibrary.org/obo/CLO_0053438"},{"id":"T4","span":{"begin":80,"end":87},"obj":"http://purl.obolibrary.org/obo/CL_0000084"},{"id":"T5","span":{"begin":123,"end":126},"obj":"http://purl.obolibrary.org/obo/PR_000001004"},{"id":"T6","span":{"begin":128,"end":135},"obj":"http://purl.obolibrary.org/obo/CL_0000084"}],"text":"Increased cytokine levels (IL-6, IL-10 and TNFα), lymphopenia (in CD4+ and CD8+ T cells), and decreased IFNγ expression in CD4+ T cells are associated with severe COVID-19."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T1","span":{"begin":27,"end":29},"obj":"Chemical"},{"id":"T3","span":{"begin":33,"end":35},"obj":"Chemical"}],"attributes":[{"id":"A1","pred":"chebi_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/CHEBI_63895"},{"id":"A2","pred":"chebi_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/CHEBI_74072"},{"id":"A3","pred":"chebi_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/CHEBI_63895"},{"id":"A4","pred":"chebi_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/CHEBI_74072"}],"text":"Increased cytokine levels (IL-6, IL-10 and TNFα), lymphopenia (in CD4+ and CD8+ T cells), and decreased IFNγ expression in CD4+ T cells are associated with severe COVID-19."}

{"project":"LitCovid-PubTator","denotations":[{"id":"26","span":{"begin":27,"end":31},"obj":"Gene"},{"id":"27","span":{"begin":33,"end":38},"obj":"Gene"},{"id":"29","span":{"begin":50,"end":61},"obj":"Disease"},{"id":"30","span":{"begin":66,"end":69},"obj":"Gene"},{"id":"31","span":{"begin":75,"end":78},"obj":"Gene"},{"id":"32","span":{"begin":104,"end":108},"obj":"Gene"},{"id":"33","span":{"begin":123,"end":126},"obj":"Gene"},{"id":"34","span":{"begin":163,"end":171},"obj":"Disease"}],"attributes":[{"id":"A26","pred":"tao:has_database_id","subj":"26","obj":"Gene:3569"},{"id":"A27","pred":"tao:has_database_id","subj":"27","obj":"Gene:3586"},{"id":"A29","pred":"tao:has_database_id","subj":"29","obj":"MESH:D008231"},{"id":"A30","pred":"tao:has_database_id","subj":"30","obj":"Gene:920"},{"id":"A31","pred":"tao:has_database_id","subj":"31","obj":"Gene:925"},{"id":"A32","pred":"tao:has_database_id","subj":"32","obj":"Gene:3458"},{"id":"A33","pred":"tao:has_database_id","subj":"33","obj":"Gene:920"},{"id":"A34","pred":"tao:has_database_id","subj":"34","obj":"MESH:C000657245"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Increased cytokine levels (IL-6, IL-10 and TNFα), lymphopenia (in CD4+ and CD8+ T cells), and decreased IFNγ expression in CD4+ T cells are associated with severe COVID-19."}

{"project":"LitCovid-PD-HP","denotations":[{"id":"T2","span":{"begin":50,"end":61},"obj":"Phenotype"}],"attributes":[{"id":"A2","pred":"hp_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/HP_0001888"}],"text":"Increased cytokine levels (IL-6, IL-10 and TNFα), lymphopenia (in CD4+ and CD8+ T cells), and decreased IFNγ expression in CD4+ T cells are associated with severe COVID-19."}

{"project":"LitCovid-sentences","denotations":[{"id":"T6","span":{"begin":0,"end":172},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Increased cytokine levels (IL-6, IL-10 and TNFα), lymphopenia (in CD4+ and CD8+ T cells), and decreased IFNγ expression in CD4+ T cells are associated with severe COVID-19."}

{"project":"LitCovid_AGAC_only","denotations":[{"id":"p3698s28","span":{"begin":94,"end":103},"obj":"NegReg"},{"id":"p3698s29","span":{"begin":104,"end":108},"obj":"Protein"},{"id":"p3698s30","span":{"begin":109,"end":119},"obj":"MPA"}],"text":"Increased cytokine levels (IL-6, IL-10 and TNFα), lymphopenia (in CD4+ and CD8+ T cells), and decreased IFNγ expression in CD4+ T cells are associated with severe COVID-19."}