PubMed:32171867 JSONTXT

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    LitCovid-OGER-BB

    {"project":"LitCovid-OGER-BB","denotations":[{"id":"T1","span":{"begin":28,"end":75},"obj":"SP_7"},{"id":"T2","span":{"begin":41,"end":52},"obj":"UBERON:0001004"},{"id":"T3","span":{"begin":170,"end":181},"obj":"NCBITaxon:11118"},{"id":"T4","span":{"begin":191,"end":199},"obj":"SP_7"},{"id":"T5","span":{"begin":296,"end":343},"obj":"SP_7"},{"id":"T6","span":{"begin":309,"end":320},"obj":"UBERON:0001004"},{"id":"T7","span":{"begin":345,"end":355},"obj":"SP_7"},{"id":"T8","span":{"begin":436,"end":446},"obj":"SP_7"},{"id":"T9","span":{"begin":512,"end":517},"obj":"UBERON:0001443"},{"id":"T10","span":{"begin":599,"end":607},"obj":"SP_7"},{"id":"T11","span":{"begin":630,"end":636},"obj":"UBERON:0000341"},{"id":"T12","span":{"begin":673,"end":683},"obj":"SP_7"},{"id":"T13","span":{"begin":859,"end":867},"obj":"SP_7"},{"id":"T14","span":{"begin":933,"end":943},"obj":"SP_7"},{"id":"T15","span":{"begin":1044,"end":1049},"obj":"UBERON:0002048"},{"id":"T16","span":{"begin":1056,"end":1062},"obj":"UBERON:0000341"},{"id":"T17","span":{"begin":1180,"end":1192},"obj":"CL:0000775"},{"id":"T18","span":{"begin":1369,"end":1379},"obj":"SP_7"},{"id":"T19","span":{"begin":1413,"end":1418},"obj":"NCBITaxon:10239"},{"id":"T20","span":{"begin":1537,"end":1547},"obj":"SP_7"}],"namespaces":[{"prefix":"NCBITaxon","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"}],"text":"Clinical characteristics of severe acute respiratory syndrome coronavirus 2 reactivation.\nOBJECTIVES: Previous studies on the pneumonia outbreak caused by the 2019 novel coronavirus disease (COVID-19) were based on information from the general population. However, limited data was available for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) reactivation. This study aimed to evaluate the clinical characteristics of the SARS-CoV-2 reactivation.\nMETHODS: Clinical records, laboratory results, and chest CT scans were retrospectively reviewed for 55 patients with laboratory-confirmed COVID-19 pneumonia (i.e., with throat swab samples that were positive for SARS-CoV-2) who were admitted to Zhongnan Hospital of Wuhan University, Wuhan, China, from Jan. 8 to Feb. 10, 2020.\nRESULTS: All 55 patients had a history of epidemiological exposure to COVID-19, and 5 (9%) patients who discharged from hospital presented with SARS-CoV-2 reactivation. Among the 5 reactivated patients, other symptoms were also observed, including fever, cough, sore throat, and fatigue. One of the 5 patients had progressive lymphopenia (from 1.3 to 0.56 × 109 cells per L) and progressive neutrophilia (from 4.5 to 18.28 × 109 cells per L). All 5 reactivated patients presented normal aminotransferase levels. Throat swab samples from the 5 reactivated patients were tested for SARS-CoV-2, indicating all positive for the virus.\nCONCLUSIONS: Findings from this small group of cases suggested that there was currently evidence for reactivation of SARS-CoV-2 and there might be no specific clinical characteristics to distinguish them."}

    LitCovid-PAS-Enju

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arser_R196","pred":"arg1Of","subj":"EnjuParser_T198","obj":"EnjuParser_T199"},{"id":"EnjuParser_R197","pred":"arg2Of","subj":"EnjuParser_T200","obj":"EnjuParser_T199"},{"id":"EnjuParser_R198","pred":"arg1Of","subj":"EnjuParser_T205","obj":"EnjuParser_T202"},{"id":"EnjuParser_R199","pred":"arg1Of","subj":"EnjuParser_T205","obj":"EnjuParser_T203"},{"id":"EnjuParser_R200","pred":"arg2Of","subj":"EnjuParser_T205","obj":"EnjuParser_T204"},{"id":"EnjuParser_R201","pred":"arg1Of","subj":"EnjuParser_T205","obj":"EnjuParser_T206"},{"id":"EnjuParser_R202","pred":"arg2Of","subj":"EnjuParser_T209","obj":"EnjuParser_T206"},{"id":"EnjuParser_R203","pred":"arg1Of","subj":"EnjuParser_T209","obj":"EnjuParser_T207"},{"id":"EnjuParser_R204","pred":"arg1Of","subj":"EnjuParser_T209","obj":"EnjuParser_T208"},{"id":"EnjuParser_R205","pred":"arg1Of","subj":"EnjuParser_T212","obj":"EnjuParser_T210"},{"id":"EnjuParser_R206","pred":"arg1Of","subj":"EnjuParser_T212","obj":"EnjuParser_T211"},{"id":"EnjuParser_R207","pred":"arg1Of","subj":"EnjuParser_T212","obj":"EnjuParser_T213"},{"id":"EnjuParser_R208","pred":"arg2Of","subj":"EnjuParser_T217","obj":"EnjuParser_T213"},{"id":"EnjuParser_R209","pred":"arg1Of","subj":"EnjuParser_T217","obj":"EnjuParser_T214"},{"id":"EnjuParser_R210","pred":"arg1Of","subj":"EnjuParser_T217","obj":"EnjuParser_T215"},{"id":"EnjuParser_R211","pred":"arg2Of","subj":"EnjuParser_T217","obj":"EnjuParser_T216"},{"id":"EnjuParser_R212","pred":"arg1Of","subj":"EnjuParser_T212","obj":"EnjuParser_T218"},{"id":"EnjuParser_R213","pred":"arg2Of","subj":"EnjuParser_T219","obj":"EnjuParser_T218"},{"id":"EnjuParser_R214","pred":"arg2Of","subj":"EnjuParser_T212","obj":"EnjuParser_T219"},{"id":"EnjuParser_R215","pred":"arg1Of","subj":"EnjuParser_T219","obj":"EnjuParser_T220"},{"id":"EnjuParser_R216","pred":"arg2Of","subj":"EnjuParser_T221","obj":"EnjuParser_T220"},{"id":"EnjuParser_R217","pred":"arg1Of","subj":"EnjuParser_T219","obj":"EnjuParser_T222"},{"id":"EnjuParser_R218","pred":"arg2Of","subj":"EnjuParser_T225","obj":"EnjuParser_T223"},{"id":"EnjuParser_R219","pred":"modOf","subj":"EnjuParser_T219","obj":"EnjuParser_T223"},{"id":"EnjuParser_R220","pred":"arg1Of","subj":"EnjuParser_T225","obj":"EnjuParser_T224"},{"id":"EnjuParser_R221","pred":"arg1Of","subj":"EnjuParser_T223","obj":"EnjuParser_T226"},{"id":"EnjuParser_R222","pred":"arg2Of","subj":"EnjuParser_T228","obj":"EnjuParser_T226"},{"id":"EnjuParser_R223","pred":"arg1Of","subj":"EnjuParser_T228","obj":"EnjuParser_T227"},{"id":"EnjuParser_R224","pred":"arg1Of","subj":"EnjuParser_T229","obj":"EnjuParser_T230"},{"id":"EnjuParser_R225","pred":"arg1Of","subj":"EnjuParser_T231","obj":"EnjuParser_T232"},{"id":"EnjuParser_R226","pred":"arg2Of","subj":"EnjuParser_T235","obj":"EnjuParser_T232"},{"id":"EnjuParser_R227","pred":"arg1Of","subj":"EnjuParser_T235","obj":"EnjuParser_T233"},{"id":"EnjuParser_R228","pred":"arg1Of","subj":"EnjuParser_T235","obj":"EnjuParser_T234"},{"id":"EnjuParser_R229","pred":"arg1Of","subj":"EnjuParser_T235","obj":"EnjuParser_T236"},{"id":"EnjuParser_R230","pred":"arg2Of","subj":"EnjuParser_T237","obj":"EnjuParser_T236"},{"id":"EnjuParser_R231","pred":"arg1Of","subj":"EnjuParser_T231","obj":"EnjuParser_T238"},{"id":"EnjuParser_R232","pred":"arg2Of","subj":"EnjuParser_T248","obj":"EnjuParser_T238"},{"id":"EnjuParser_R233","pred":"arg1Of","subj":"EnjuParser_T248","obj":"EnjuParser_T239"},{"id":"EnjuParser_R234","pred":"arg1Of","subj":"EnjuParser_T240","obj":"EnjuParser_T241"},{"id":"EnjuParser_R235","pred":"arg2Of","subj":"EnjuParser_T243","obj":"EnjuParser_T241"},{"id":"EnjuParser_R236","pred":"arg1Of","subj":"EnjuParser_T241","obj":"EnjuParser_T242"},{"id":"EnjuParser_R237","pred":"arg1Of","subj":"EnjuParser_T243","obj":"EnjuParser_T244"},{"id":"EnjuParser_R238","pred":"arg2Of","subj":"EnjuParser_T245","obj":"EnjuParser_T244"},{"id":"EnjuParser_R239","pred":"arg1Of","subj":"EnjuParser_T245","obj":"EnjuParser_T246"},{"id":"EnjuParser_R240","pred":"arg2Of","subj":"EnjuParser_T247","obj":"EnjuParser_T246"},{"id":"EnjuParser_R241","pred":"arg1Of","subj":"EnjuParser_T241","obj":"EnjuParser_T248"},{"id":"EnjuParser_R242","pred":"arg2Of","subj":"EnjuParser_T251","obj":"EnjuParser_T248"},{"id":"EnjuParser_R243","pred":"arg1Of","subj":"EnjuParser_T249","obj":"EnjuParser_T250"},{"id":"EnjuParser_R244","pred":"arg2Of","subj":"EnjuParser_T251","obj":"EnjuParser_T250"},{"id":"EnjuParser_R245","pred":"arg1Of","subj":"EnjuParser_T249","obj":"EnjuParser_T251"},{"id":"EnjuParser_R246","pred":"arg2Of","subj":"EnjuParser_T255","obj":"EnjuParser_T251"},{"id":"EnjuParser_R247","pred":"arg1Of","subj":"EnjuParser_T255","obj":"EnjuParser_T252"},{"id":"EnjuParser_R248","pred":"arg1Of","subj":"EnjuParser_T254","obj":"EnjuParser_T253"},{"id":"EnjuParser_R249","pred":"arg1Of","subj":"EnjuParser_T255","obj":"EnjuParser_T254"},{"id":"EnjuParser_R250","pred":"arg1Of","subj":"EnjuParser_T257","obj":"EnjuParser_T256"},{"id":"EnjuParser_R251","pred":"modOf","subj":"EnjuParser_T251","obj":"EnjuParser_T256"},{"id":"EnjuParser_R252","pred":"arg1Of","subj":"EnjuParser_T249","obj":"EnjuParser_T257"},{"id":"EnjuParser_R253","pred":"arg2Of","subj":"EnjuParser_T258","obj":"EnjuParser_T257"}],"text":"Clinical characteristics of severe acute respiratory syndrome coronavirus 2 reactivation.\nOBJECTIVES: Previous studies on the pneumonia outbreak caused by the 2019 novel coronavirus disease (COVID-19) were based on information from the general population. However, limited data was available for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) reactivation. This study aimed to evaluate the clinical characteristics of the SARS-CoV-2 reactivation.\nMETHODS: Clinical records, laboratory results, and chest CT scans were retrospectively reviewed for 55 patients with laboratory-confirmed COVID-19 pneumonia (i.e., with throat swab samples that were positive for SARS-CoV-2) who were admitted to Zhongnan Hospital of Wuhan University, Wuhan, China, from Jan. 8 to Feb. 10, 2020.\nRESULTS: All 55 patients had a history of epidemiological exposure to COVID-19, and 5 (9%) patients who discharged from hospital presented with SARS-CoV-2 reactivation. Among the 5 reactivated patients, other symptoms were also observed, including fever, cough, sore throat, and fatigue. One of the 5 patients had progressive lymphopenia (from 1.3 to 0.56 × 109 cells per L) and progressive neutrophilia (from 4.5 to 18.28 × 109 cells per L). All 5 reactivated patients presented normal aminotransferase levels. Throat swab samples from the 5 reactivated patients were tested for SARS-CoV-2, indicating all positive for the virus.\nCONCLUSIONS: Findings from this small group of cases suggested that there was currently evidence for reactivation of SARS-CoV-2 and there might be no specific clinical characteristics to distinguish them."}

    LitCovid-ArguminSci

    {"project":"LitCovid-ArguminSci","denotations":[{"id":"T1","span":{"begin":0,"end":89},"obj":"DRI_Background"},{"id":"T2","span":{"begin":90,"end":255},"obj":"DRI_Background"},{"id":"T3","span":{"begin":256,"end":370},"obj":"DRI_Background"},{"id":"T4","span":{"begin":371,"end":460},"obj":"DRI_Background"},{"id":"T5","span":{"begin":461,"end":577},"obj":"DRI_Background"},{"id":"T6","span":{"begin":608,"end":788},"obj":"DRI_Background"},{"id":"T7","span":{"begin":958,"end":1076},"obj":"DRI_Background"},{"id":"T8","span":{"begin":1077,"end":1231},"obj":"DRI_Background"},{"id":"T9","span":{"begin":1301,"end":1419},"obj":"DRI_Approach"},{"id":"T10","span":{"begin":1420,"end":1624},"obj":"DRI_Background"}],"text":"Clinical characteristics of severe acute respiratory syndrome coronavirus 2 reactivation.\nOBJECTIVES: Previous studies on the pneumonia outbreak caused by the 2019 novel coronavirus disease (COVID-19) were based on information from the general population. However, limited data was available for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) reactivation. This study aimed to evaluate the clinical characteristics of the SARS-CoV-2 reactivation.\nMETHODS: Clinical records, laboratory results, and chest CT scans were retrospectively reviewed for 55 patients with laboratory-confirmed COVID-19 pneumonia (i.e., with throat swab samples that were positive for SARS-CoV-2) who were admitted to Zhongnan Hospital of Wuhan University, Wuhan, China, from Jan. 8 to Feb. 10, 2020.\nRESULTS: All 55 patients had a history of epidemiological exposure to COVID-19, and 5 (9%) patients who discharged from hospital presented with SARS-CoV-2 reactivation. Among the 5 reactivated patients, other symptoms were also observed, including fever, cough, sore throat, and fatigue. One of the 5 patients had progressive lymphopenia (from 1.3 to 0.56 × 109 cells per L) and progressive neutrophilia (from 4.5 to 18.28 × 109 cells per L). All 5 reactivated patients presented normal aminotransferase levels. Throat swab samples from the 5 reactivated patients were tested for SARS-CoV-2, indicating all positive for the virus.\nCONCLUSIONS: Findings from this small group of cases suggested that there was currently evidence for reactivation of SARS-CoV-2 and there might be no specific clinical characteristics to distinguish them."}

    LitCovid-OGER

    {"project":"LitCovid-OGER","denotations":[{"id":"T1","span":{"begin":1458,"end":1463},"obj":"CHEBI:24433"},{"id":"T1","span":{"begin":1413,"end":1418},"obj":"GO:0019012"},{"id":"T1","span":{"begin":345,"end":349},"obj":"PR:000014459"},{"id":"T2","span":{"begin":436,"end":440},"obj":"PR:000014459"},{"id":"T3","span":{"begin":673,"end":677},"obj":"PR:000014459"},{"id":"T4","span":{"begin":685,"end":688},"obj":"PR:O01367"},{"id":"T5","span":{"begin":889,"end":892},"obj":"PR:O01367"},{"id":"T6","span":{"begin":933,"end":937},"obj":"PR:000014459"},{"id":"T7","span":{"begin":1369,"end":1373},"obj":"PR:000014459"},{"id":"T8","span":{"begin":1537,"end":1541},"obj":"PR:000014459"},{"id":"T1","span":{"begin":1564,"end":1566},"obj":"SO:0000999"},{"id":"T1","span":{"begin":512,"end":517},"obj":"UBERON:0001443"},{"id":"T2","span":{"begin":630,"end":636},"obj":"UBERON:0000341"},{"id":"T3","span":{"begin":1056,"end":1062},"obj":"UBERON:0000341"}],"namespaces":[{"prefix":"PR","uri":"http://purl.obolibrary.org/obo/PR_"},{"prefix":"UBERON","uri":"http://purl.obolibrary.org/obo/UBERON_"}],"text":"Clinical characteristics of severe acute respiratory syndrome coronavirus 2 reactivation.\nOBJECTIVES: Previous studies on the pneumonia outbreak caused by the 2019 novel coronavirus disease (COVID-19) were based on information from the general population. However, limited data was available for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) reactivation. This study aimed to evaluate the clinical characteristics of the SARS-CoV-2 reactivation.\nMETHODS: Clinical records, laboratory results, and chest CT scans were retrospectively reviewed for 55 patients with laboratory-confirmed COVID-19 pneumonia (i.e., with throat swab samples that were positive for SARS-CoV-2) who were admitted to Zhongnan Hospital of Wuhan University, Wuhan, China, from Jan. 8 to Feb. 10, 2020.\nRESULTS: All 55 patients had a history of epidemiological exposure to COVID-19, and 5 (9%) patients who discharged from hospital presented with SARS-CoV-2 reactivation. Among the 5 reactivated patients, other symptoms were also observed, including fever, cough, sore throat, and fatigue. One of the 5 patients had progressive lymphopenia (from 1.3 to 0.56 × 109 cells per L) and progressive neutrophilia (from 4.5 to 18.28 × 109 cells per L). All 5 reactivated patients presented normal aminotransferase levels. Throat swab samples from the 5 reactivated patients were tested for SARS-CoV-2, indicating all positive for the virus.\nCONCLUSIONS: Findings from this small group of cases suggested that there was currently evidence for reactivation of SARS-CoV-2 and there might be no specific clinical characteristics to distinguish them."}

    LitCovid-PubTatorCentral

    {"project":"LitCovid-PubTatorCentral","denotations":[{"id":"T1","span":{"begin":28,"end":73},"obj":"Species:227859"},{"id":"T2","span":{"begin":126,"end":135},"obj":"Disease:MESH:D011014"},{"id":"T3","span":{"begin":170,"end":189},"obj":"Disease:MESH:D018352"},{"id":"T4","span":{"begin":296,"end":341},"obj":"Species:227859"},{"id":"T5","span":{"begin":564,"end":572},"obj":"Species:9606"},{"id":"T6","span":{"begin":608,"end":617},"obj":"Disease:MESH:D011014"},{"id":"T7","span":{"begin":805,"end":813},"obj":"Species:9606"},{"id":"T8","span":{"begin":880,"end":888},"obj":"Species:9606"},{"id":"T9","span":{"begin":982,"end":990},"obj":"Species:9606"},{"id":"T10","span":{"begin":1037,"end":1042},"obj":"Disease:MESH:D005334"},{"id":"T11","span":{"begin":1044,"end":1049},"obj":"Disease:MESH:D003371"},{"id":"T12","span":{"begin":1068,"end":1075},"obj":"Disease:MESH:D005221"},{"id":"T13","span":{"begin":1090,"end":1098},"obj":"Species:9606"},{"id":"T14","span":{"begin":1115,"end":1126},"obj":"Disease:MESH:D008231"},{"id":"T15","span":{"begin":1180,"end":1192},"obj":"Disease:MESH:C563010"},{"id":"T16","span":{"begin":1250,"end":1258},"obj":"Species:9606"},{"id":"T17","span":{"begin":1344,"end":1352},"obj":"Species:9606"}],"text":"Clinical characteristics of severe acute respiratory syndrome coronavirus 2 reactivation.\nOBJECTIVES: Previous studies on the pneumonia outbreak caused by the 2019 novel coronavirus disease (COVID-19) were based on information from the general population. However, limited data was available for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) reactivation. This study aimed to evaluate the clinical characteristics of the SARS-CoV-2 reactivation.\nMETHODS: Clinical records, laboratory results, and chest CT scans were retrospectively reviewed for 55 patients with laboratory-confirmed COVID-19 pneumonia (i.e., with throat swab samples that were positive for SARS-CoV-2) who were admitted to Zhongnan Hospital of Wuhan University, Wuhan, China, from Jan. 8 to Feb. 10, 2020.\nRESULTS: All 55 patients had a history of epidemiological exposure to COVID-19, and 5 (9%) patients who discharged from hospital presented with SARS-CoV-2 reactivation. Among the 5 reactivated patients, other symptoms were also observed, including fever, cough, sore throat, and fatigue. One of the 5 patients had progressive lymphopenia (from 1.3 to 0.56 × 109 cells per L) and progressive neutrophilia (from 4.5 to 18.28 × 109 cells per L). All 5 reactivated patients presented normal aminotransferase levels. Throat swab samples from the 5 reactivated patients were tested for SARS-CoV-2, indicating all positive for the virus.\nCONCLUSIONS: Findings from this small group of cases suggested that there was currently evidence for reactivation of SARS-CoV-2 and there might be no specific clinical characteristics to distinguish them."}

    LitCovid-sentences-v1

    {"project":"LitCovid-sentences-v1","denotations":[{"id":"TextSentencer_T1","span":{"begin":0,"end":89},"obj":"Sentence"},{"id":"TextSentencer_T2","span":{"begin":90,"end":101},"obj":"Sentence"},{"id":"TextSentencer_T3","span":{"begin":102,"end":255},"obj":"Sentence"},{"id":"TextSentencer_T4","span":{"begin":256,"end":370},"obj":"Sentence"},{"id":"TextSentencer_T5","span":{"begin":371,"end":460},"obj":"Sentence"},{"id":"TextSentencer_T6","span":{"begin":461,"end":469},"obj":"Sentence"},{"id":"TextSentencer_T7","span":{"begin":470,"end":768},"obj":"Sentence"},{"id":"TextSentencer_T8","span":{"begin":769,"end":778},"obj":"Sentence"},{"id":"TextSentencer_T9","span":{"begin":779,"end":788},"obj":"Sentence"},{"id":"TextSentencer_T10","span":{"begin":789,"end":797},"obj":"Sentence"},{"id":"TextSentencer_T11","span":{"begin":798,"end":957},"obj":"Sentence"},{"id":"TextSentencer_T12","span":{"begin":958,"end":1076},"obj":"Sentence"},{"id":"TextSentencer_T13","span":{"begin":1077,"end":1231},"obj":"Sentence"},{"id":"TextSentencer_T14","span":{"begin":1232,"end":1300},"obj":"Sentence"},{"id":"TextSentencer_T15","span":{"begin":1301,"end":1419},"obj":"Sentence"},{"id":"TextSentencer_T16","span":{"begin":1420,"end":1432},"obj":"Sentence"},{"id":"TextSentencer_T17","span":{"begin":1433,"end":1624},"obj":"Sentence"}],"text":"Clinical characteristics of severe acute respiratory syndrome coronavirus 2 reactivation.\nOBJECTIVES: Previous studies on the pneumonia outbreak caused by the 2019 novel coronavirus disease (COVID-19) were based on information from the general population. However, limited data was available for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) reactivation. This study aimed to evaluate the clinical characteristics of the SARS-CoV-2 reactivation.\nMETHODS: Clinical records, laboratory results, and chest CT scans were retrospectively reviewed for 55 patients with laboratory-confirmed COVID-19 pneumonia (i.e., with throat swab samples that were positive for SARS-CoV-2) who were admitted to Zhongnan Hospital of Wuhan University, Wuhan, China, from Jan. 8 to Feb. 10, 2020.\nRESULTS: All 55 patients had a history of epidemiological exposure to COVID-19, and 5 (9%) patients who discharged from hospital presented with SARS-CoV-2 reactivation. Among the 5 reactivated patients, other symptoms were also observed, including fever, cough, sore throat, and fatigue. One of the 5 patients had progressive lymphopenia (from 1.3 to 0.56 × 109 cells per L) and progressive neutrophilia (from 4.5 to 18.28 × 109 cells per L). All 5 reactivated patients presented normal aminotransferase levels. Throat swab samples from the 5 reactivated patients were tested for SARS-CoV-2, indicating all positive for the virus.\nCONCLUSIONS: Findings from this small group of cases suggested that there was currently evidence for reactivation of SARS-CoV-2 and there might be no specific clinical characteristics to distinguish them."}

    LitCovid-PD-MONDO-v1

    {"project":"LitCovid-PD-MONDO-v1","denotations":[{"id":"T1","span":{"begin":28,"end":75},"obj":"Disease"},{"id":"T2","span":{"begin":28,"end":61},"obj":"Disease"},{"id":"T3","span":{"begin":126,"end":135},"obj":"Disease"},{"id":"T4","span":{"begin":191,"end":199},"obj":"Disease"},{"id":"T5","span":{"begin":296,"end":343},"obj":"Disease"},{"id":"T6","span":{"begin":296,"end":329},"obj":"Disease"},{"id":"T7","span":{"begin":345,"end":353},"obj":"Disease"},{"id":"T8","span":{"begin":436,"end":444},"obj":"Disease"},{"id":"T9","span":{"begin":599,"end":607},"obj":"Disease"},{"id":"T10","span":{"begin":608,"end":617},"obj":"Disease"},{"id":"T11","span":{"begin":673,"end":681},"obj":"Disease"},{"id":"T12","span":{"begin":859,"end":867},"obj":"Disease"},{"id":"T13","span":{"begin":933,"end":941},"obj":"Disease"},{"id":"T14","span":{"begin":1051,"end":1062},"obj":"Disease"},{"id":"T15","span":{"begin":1115,"end":1126},"obj":"Disease"},{"id":"T16","span":{"begin":1369,"end":1377},"obj":"Disease"},{"id":"T17","span":{"begin":1537,"end":1545},"obj":"Disease"}],"attributes":[{"id":"A1","pred":"mondo_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A2","pred":"mondo_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A3","pred":"mondo_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/MONDO_0005249"},{"id":"A4","pred":"mondo_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A5","pred":"mondo_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A6","pred":"mondo_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A7","pred":"mondo_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A8","pred":"mondo_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A9","pred":"mondo_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A10","pred":"mondo_id","subj":"T10","obj":"http://purl.obolibrary.org/obo/MONDO_0005249"},{"id":"A11","pred":"mondo_id","subj":"T11","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A12","pred":"mondo_id","subj":"T12","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A13","pred":"mondo_id","subj":"T13","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A14","pred":"mondo_id","subj":"T14","obj":"http://purl.obolibrary.org/obo/MONDO_0002258"},{"id":"A15","pred":"mondo_id","subj":"T15","obj":"http://purl.obolibrary.org/obo/MONDO_0003783"},{"id":"A16","pred":"mondo_id","subj":"T16","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A17","pred":"mondo_id","subj":"T17","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":"Clinical characteristics of severe acute respiratory syndrome coronavirus 2 reactivation.\nOBJECTIVES: Previous studies on the pneumonia outbreak caused by the 2019 novel coronavirus disease (COVID-19) were based on information from the general population. However, limited data was available for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) reactivation. This study aimed to evaluate the clinical characteristics of the SARS-CoV-2 reactivation.\nMETHODS: Clinical records, laboratory results, and chest CT scans were retrospectively reviewed for 55 patients with laboratory-confirmed COVID-19 pneumonia (i.e., with throat swab samples that were positive for SARS-CoV-2) who were admitted to Zhongnan Hospital of Wuhan University, Wuhan, China, from Jan. 8 to Feb. 10, 2020.\nRESULTS: All 55 patients had a history of epidemiological exposure to COVID-19, and 5 (9%) patients who discharged from hospital presented with SARS-CoV-2 reactivation. Among the 5 reactivated patients, other symptoms were also observed, including fever, cough, sore throat, and fatigue. One of the 5 patients had progressive lymphopenia (from 1.3 to 0.56 × 109 cells per L) and progressive neutrophilia (from 4.5 to 18.28 × 109 cells per L). All 5 reactivated patients presented normal aminotransferase levels. Throat swab samples from the 5 reactivated patients were tested for SARS-CoV-2, indicating all positive for the virus.\nCONCLUSIONS: Findings from this small group of cases suggested that there was currently evidence for reactivation of SARS-CoV-2 and there might be no specific clinical characteristics to distinguish them."}

    LitCovid-PD-HP-v1

    {"project":"LitCovid-PD-HP-v1","denotations":[{"id":"T1","span":{"begin":126,"end":135},"obj":"Phenotype"},{"id":"T2","span":{"begin":608,"end":617},"obj":"Phenotype"},{"id":"T3","span":{"begin":1037,"end":1042},"obj":"Phenotype"},{"id":"T4","span":{"begin":1044,"end":1049},"obj":"Phenotype"},{"id":"T5","span":{"begin":1051,"end":1062},"obj":"Phenotype"},{"id":"T6","span":{"begin":1051,"end":1055},"obj":"Phenotype"},{"id":"T7","span":{"begin":1068,"end":1075},"obj":"Phenotype"},{"id":"T8","span":{"begin":1115,"end":1126},"obj":"Phenotype"},{"id":"T9","span":{"begin":1180,"end":1192},"obj":"Phenotype"}],"attributes":[{"id":"A1","pred":"hp_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/HP_0002090"},{"id":"A2","pred":"hp_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/HP_0002090"},{"id":"A5","pred":"hp_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/HP_0100776"},{"id":"A7","pred":"hp_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/HP_0012378"},{"id":"A4","pred":"hp_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/HP_0012735"},{"id":"A9","pred":"hp_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/HP_0011897"},{"id":"A3","pred":"hp_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/HP_0001945"},{"id":"A8","pred":"hp_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/HP_0001888"},{"id":"A6","pred":"hp_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/HP_0012531"}],"text":"Clinical characteristics of severe acute respiratory syndrome coronavirus 2 reactivation.\nOBJECTIVES: Previous studies on the pneumonia outbreak caused by the 2019 novel coronavirus disease (COVID-19) were based on information from the general population. However, limited data was available for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) reactivation. This study aimed to evaluate the clinical characteristics of the SARS-CoV-2 reactivation.\nMETHODS: Clinical records, laboratory results, and chest CT scans were retrospectively reviewed for 55 patients with laboratory-confirmed COVID-19 pneumonia (i.e., with throat swab samples that were positive for SARS-CoV-2) who were admitted to Zhongnan Hospital of Wuhan University, Wuhan, China, from Jan. 8 to Feb. 10, 2020.\nRESULTS: All 55 patients had a history of epidemiological exposure to COVID-19, and 5 (9%) patients who discharged from hospital presented with SARS-CoV-2 reactivation. Among the 5 reactivated patients, other symptoms were also observed, including fever, cough, sore throat, and fatigue. One of the 5 patients had progressive lymphopenia (from 1.3 to 0.56 × 109 cells per L) and progressive neutrophilia (from 4.5 to 18.28 × 109 cells per L). All 5 reactivated patients presented normal aminotransferase levels. Throat swab samples from the 5 reactivated patients were tested for SARS-CoV-2, indicating all positive for the virus.\nCONCLUSIONS: Findings from this small group of cases suggested that there was currently evidence for reactivation of SARS-CoV-2 and there might be no specific clinical characteristics to distinguish them."}

    LitCovid-PD-FMA-UBERON-v1

    {"project":"LitCovid-PD-FMA-UBERON-v1","denotations":[{"id":"T1","span":{"begin":512,"end":517},"obj":"Body_part"},{"id":"T2","span":{"begin":630,"end":636},"obj":"Body_part"},{"id":"T3","span":{"begin":1056,"end":1062},"obj":"Body_part"},{"id":"T4","span":{"begin":1151,"end":1156},"obj":"Body_part"},{"id":"T5","span":{"begin":1218,"end":1223},"obj":"Body_part"},{"id":"T6","span":{"begin":1301,"end":1307},"obj":"Body_part"}],"attributes":[{"id":"A2","pred":"fma_id","subj":"T2","obj":"http://purl.org/sig/ont/fma/fma228738"},{"id":"A25540","pred":"uberon_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/UBERON_0000341"},{"id":"A3","pred":"fma_id","subj":"T3","obj":"http://purl.org/sig/ont/fma/fma228738"},{"id":"A5","pred":"fma_id","subj":"T5","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A81937","pred":"uberon_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/UBERON_0000341"},{"id":"A6","pred":"fma_id","subj":"T6","obj":"http://purl.org/sig/ont/fma/fma228738"},{"id":"A8014","pred":"uberon_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/UBERON_0000341"},{"id":"A4","pred":"fma_id","subj":"T4","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A1","pred":"fma_id","subj":"T1","obj":"http://purl.org/sig/ont/fma/fma9576"},{"id":"A59764","pred":"uberon_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/UBERON_0001443"}],"text":"Clinical characteristics of severe acute respiratory syndrome coronavirus 2 reactivation.\nOBJECTIVES: Previous studies on the pneumonia outbreak caused by the 2019 novel coronavirus disease (COVID-19) were based on information from the general population. However, limited data was available for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) reactivation. This study aimed to evaluate the clinical characteristics of the SARS-CoV-2 reactivation.\nMETHODS: Clinical records, laboratory results, and chest CT scans were retrospectively reviewed for 55 patients with laboratory-confirmed COVID-19 pneumonia (i.e., with throat swab samples that were positive for SARS-CoV-2) who were admitted to Zhongnan Hospital of Wuhan University, Wuhan, China, from Jan. 8 to Feb. 10, 2020.\nRESULTS: All 55 patients had a history of epidemiological exposure to COVID-19, and 5 (9%) patients who discharged from hospital presented with SARS-CoV-2 reactivation. Among the 5 reactivated patients, other symptoms were also observed, including fever, cough, sore throat, and fatigue. One of the 5 patients had progressive lymphopenia (from 1.3 to 0.56 × 109 cells per L) and progressive neutrophilia (from 4.5 to 18.28 × 109 cells per L). All 5 reactivated patients presented normal aminotransferase levels. Throat swab samples from the 5 reactivated patients were tested for SARS-CoV-2, indicating all positive for the virus.\nCONCLUSIONS: Findings from this small group of cases suggested that there was currently evidence for reactivation of SARS-CoV-2 and there might be no specific clinical characteristics to distinguish them."}

    LitCovid-TimeML

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