PubMed:32161107 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/32161107","sourcedb":"PubMed","sourceid":"32161107","source_url":"https://www.ncbi.nlm.nih.gov/pubmed/32161107","text":"New coronavirus outbreak: Framing questions for pandemic prevention.\nWe need to understand and quantify the dominant variables that govern the SARS-CoV-2 outbreak, rather than relying exclusively on confirmed cases and their geospatial spread.","tracks":[{"project":"LitCovid-PAS-Enju","denotations":[{"id":"EnjuParser_T0","span":{"begin":0,"end":3},"obj":"JJ"},{"id":"EnjuParser_T1","span":{"begin":4,"end":15},"obj":"NN"},{"id":"EnjuParser_T2","span":{"begin":16,"end":24},"obj":"NN"},{"id":"EnjuParser_T3","span":{"begin":24,"end":25},"obj":"-COLON-"},{"id":"EnjuParser_T4","span":{"begin":26,"end":33},"obj":"VBG"},{"id":"EnjuParser_T5","span":{"begin":34,"end":43},"obj":"NNS"},{"id":"EnjuParser_T6","span":{"begin":44,"end":47},"obj":"IN"},{"id":"EnjuParser_T7","span":{"begin":48,"end":56},"obj":"JJ"},{"id":"EnjuParser_T8","span":{"begin":57,"end":67},"obj":"NN"},{"id":"EnjuParser_T9","span":{"begin":69,"end":71},"obj":"PRP"},{"id":"EnjuParser_T10","span":{"begin":72,"end":76},"obj":"VBP"},{"id":"EnjuParser_T11","span":{"begin":77,"end":79},"obj":"TO"},{"id":"EnjuParser_T12","span":{"begin":80,"end":90},"obj":"VB"},{"id":"EnjuParser_T13","span":{"begin":91,"end":94},"obj":"CC"},{"id":"EnjuParser_T14","span":{"begin":95,"end":103},"obj":"VB"},{"id":"EnjuParser_T15","span":{"begin":104,"end":107},"obj":"DT"},{"id":"EnjuParser_T16","span":{"begin":108,"end":116},"obj":"JJ"},{"id":"EnjuParser_T17","span":{"begin":117,"end":126},"obj":"NNS"},{"id":"EnjuParser_T18","span":{"begin":127,"end":131},"obj":"WDT"},{"id":"EnjuParser_T19","span":{"begin":132,"end":138},"obj":"VBP"},{"id":"EnjuParser_T20","span":{"begin":139,"end":142},"obj":"DT"},{"id":"EnjuParser_T21","span":{"begin":143,"end":153},"obj":"NN"},{"id":"EnjuParser_T22","span":{"begin":154,"end":162},"obj":"NN"},{"id":"EnjuParser_T23","span":{"begin":162,"end":163},"obj":"-COMMA-"},{"id":"EnjuParser_T24","span":{"begin":164,"end":170},"obj":"RB"},{"id":"EnjuParser_T25","span":{"begin":171,"end":175},"obj":"IN"},{"id":"EnjuParser_T26","span":{"begin":176,"end":183},"obj":"VBG"},{"id":"EnjuParser_T27","span":{"begin":184,"end":195},"obj":"RB"},{"id":"EnjuParser_T28","span":{"begin":196,"end":198},"obj":"IN"},{"id":"EnjuParser_T29","span":{"begin":199,"end":208},"obj":"VBN"},{"id":"EnjuParser_T30","span":{"begin":209,"end":214},"obj":"NNS"},{"id":"EnjuParser_T31","span":{"begin":215,"end":218},"obj":"CC"},{"id":"EnjuParser_T32","span":{"begin":219,"end":224},"obj":"PRP-DOLLAR-"},{"id":"EnjuParser_T33","span":{"begin":225,"end":235},"obj":"JJ"},{"id":"EnjuParser_T34","span":{"begin":236,"end":242},"obj":"NN"}],"relations":[{"id":"EnjuParser_R0","pred":"arg1Of","subj":"EnjuParser_T2","obj":"EnjuParser_T0"},{"id":"EnjuParser_R1","pred":"arg1Of","subj":"EnjuParser_T2","obj":"EnjuParser_T1"},{"id":"EnjuParser_R2","pred":"arg1Of","subj":"EnjuParser_T2","obj":"EnjuParser_T3"},{"id":"EnjuParser_R3","pred":"arg1Of","subj":"EnjuParser_T5","obj":"EnjuParser_T4"},{"id":"EnjuParser_R4","pred":"arg1Of","subj":"EnjuParser_T5","obj":"EnjuParser_T6"},{"id":"EnjuParser_R5","pred":"arg2Of","subj":"EnjuParser_T8","obj":"EnjuParser_T6"},{"id":"EnjuParser_R6","pred":"arg1Of","subj":"EnjuParser_T8","obj":"EnjuParser_T7"},{"id":"EnjuParser_R7","pred":"arg1Of","subj":"EnjuParser_T9","obj":"EnjuParser_T10"},{"id":"EnjuParser_R8","pred":"arg2Of","subj":"EnjuParser_T13","obj":"EnjuParser_T10"},{"id":"EnjuParser_R9","pred":"arg1Of","subj":"EnjuParser_T13","obj":"EnjuParser_T11"},{"id":"EnjuParser_R10","pred":"arg1Of","subj":"EnjuParser_T9","obj":"EnjuParser_T12"},{"id":"EnjuParser_R11","pred":"arg2Of","subj":"EnjuParser_T17","obj":"EnjuParser_T12"},{"id":"EnjuParser_R12","pred":"arg1Of","subj":"EnjuParser_T12","obj":"EnjuParser_T13"},{"id":"EnjuParser_R13","pred":"arg2Of","subj":"EnjuParser_T14","obj":"EnjuParser_T13"},{"id":"EnjuParser_R14","pred":"arg1Of","subj":"EnjuParser_T9","obj":"EnjuParser_T14"},{"id":"EnjuParser_R15","pred":"arg2Of","subj":"EnjuParser_T17","obj":"EnjuParser_T14"},{"id":"EnjuParser_R16","pred":"arg1Of","subj":"EnjuParser_T17","obj":"EnjuParser_T15"},{"id":"EnjuParser_R17","pred":"arg1Of","subj":"EnjuParser_T17","obj":"EnjuParser_T16"},{"id":"EnjuParser_R18","pred":"arg1Of","subj":"EnjuParser_T17","obj":"EnjuParser_T18"},{"id":"EnjuParser_R19","pred":"arg1Of","subj":"EnjuParser_T17","obj":"EnjuParser_T19"},{"id":"EnjuParser_R20","pred":"arg2Of","subj":"EnjuParser_T22","obj":"EnjuParser_T19"},{"id":"EnjuParser_R21","pred":"arg1Of","subj":"EnjuParser_T22","obj":"EnjuParser_T20"},{"id":"EnjuParser_R22","pred":"arg1Of","subj":"EnjuParser_T22","obj":"EnjuParser_T21"},{"id":"EnjuParser_R23","pred":"arg1Of","subj":"EnjuParser_T19","obj":"EnjuParser_T23"},{"id":"EnjuParser_R24","pred":"arg1Of","subj":"EnjuParser_T19","obj":"EnjuParser_T24"},{"id":"EnjuParser_R25","pred":"arg1Of","subj":"EnjuParser_T24","obj":"EnjuParser_T25"},{"id":"EnjuParser_R26","pred":"arg2Of","subj":"EnjuParser_T26","obj":"EnjuParser_T25"},{"id":"EnjuParser_R27","pred":"arg1Of","subj":"EnjuParser_T26","obj":"EnjuParser_T27"},{"id":"EnjuParser_R28","pred":"arg1Of","subj":"EnjuParser_T26","obj":"EnjuParser_T28"},{"id":"EnjuParser_R29","pred":"arg2Of","subj":"EnjuParser_T31","obj":"EnjuParser_T28"},{"id":"EnjuParser_R30","pred":"arg2Of","subj":"EnjuParser_T30","obj":"EnjuParser_T29"},{"id":"EnjuParser_R31","pred":"arg1Of","subj":"EnjuParser_T30","obj":"EnjuParser_T31"},{"id":"EnjuParser_R32","pred":"arg2Of","subj":"EnjuParser_T34","obj":"EnjuParser_T31"},{"id":"EnjuParser_R33","pred":"arg1Of","subj":"EnjuParser_T34","obj":"EnjuParser_T32"},{"id":"EnjuParser_R34","pred":"arg1Of","subj":"EnjuParser_T34","obj":"EnjuParser_T33"}],"attributes":[{"subj":"EnjuParser_T0","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T1","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T2","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T3","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T4","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T5","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T6","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T7","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T8","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T9","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T10","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T11","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T12","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T13","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T14","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T15","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T16","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T17","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T18","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T19","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T20","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T21","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T22","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T23","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T24","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T25","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T26","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T27","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T28","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T29","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T30","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T31","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T32","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T33","pred":"source","obj":"LitCovid-PAS-Enju"},{"subj":"EnjuParser_T34","pred":"source","obj":"LitCovid-PAS-Enju"}]},{"project":"LitCovid-ArguminSci","denotations":[{"id":"T1","span":{"begin":69,"end":243},"obj":"DRI_Approach"}],"attributes":[{"subj":"T1","pred":"source","obj":"LitCovid-ArguminSci"}]},{"project":"LitCovid-OGER","denotations":[{"id":"T1","span":{"begin":143,"end":147},"obj":"PR:000014459"}],"namespaces":[{"prefix":"PR","uri":"http://purl.obolibrary.org/obo/PR_"},{"prefix":"UBERON","uri":"http://purl.obolibrary.org/obo/UBERON_"}],"attributes":[{"subj":"T1","pred":"source","obj":"LitCovid-OGER"}]},{"project":"LitCovid-OGER-BB","denotations":[{"id":"T1","span":{"begin":4,"end":15},"obj":"NCBITaxon:11118"},{"id":"T2","span":{"begin":132,"end":138},"obj":"GO:0065007"},{"id":"T3","span":{"begin":143,"end":153},"obj":"SP_7"}],"namespaces":[{"prefix":"NCBITaxon","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"}],"attributes":[{"subj":"T1","pred":"source","obj":"LitCovid-OGER-BB"},{"subj":"T2","pred":"source","obj":"LitCovid-OGER-BB"},{"subj":"T3","pred":"source","obj":"LitCovid-OGER-BB"}]},{"project":"LitCovid-sentences-v1","denotations":[{"id":"TextSentencer_T1","span":{"begin":0,"end":25},"obj":"Sentence"},{"id":"TextSentencer_T2","span":{"begin":26,"end":68},"obj":"Sentence"},{"id":"TextSentencer_T3","span":{"begin":69,"end":243},"obj":"Sentence"}],"attributes":[{"subj":"TextSentencer_T1","pred":"source","obj":"LitCovid-sentences-v1"},{"subj":"TextSentencer_T2","pred":"source","obj":"LitCovid-sentences-v1"},{"subj":"TextSentencer_T3","pred":"source","obj":"LitCovid-sentences-v1"}]},{"project":"LitCovid-TimeML","denotations":[{"id":"tok1","span":{"begin":0,"end":3},"obj":"NNP"},{"id":"tok2","span":{"begin":4,"end":15},"obj":"JJ"},{"id":"tok3","span":{"begin":16,"end":24},"obj":"NN"},{"id":"tok4","span":{"begin":24,"end":25},"obj":":"},{"id":"tok5","span":{"begin":26,"end":33},"obj":"NNP"},{"id":"tok6","span":{"begin":34,"end":43},"obj":"NNS"},{"id":"tok7","span":{"begin":44,"end":47},"obj":"IN"},{"id":"tok8","span":{"begin":48,"end":56},"obj":"JJ"},{"id":"tok9","span":{"begin":57,"end":67},"obj":"NN"},{"id":"tok10","span":{"begin":67,"end":68},"obj":"."},{"id":"tok11","span":{"begin":69,"end":71},"obj":"PRP"},{"id":"tok12","span":{"begin":72,"end":76},"obj":"VBP"},{"id":"tok13","span":{"begin":77,"end":79},"obj":"TO"},{"id":"tok14","span":{"begin":80,"end":90},"obj":"VB"},{"id":"tok15","span":{"begin":91,"end":94},"obj":"CC"},{"id":"tok16","span":{"begin":95,"end":103},"obj":"VB"},{"id":"tok17","span":{"begin":104,"end":107},"obj":"DT"},{"id":"tok18","span":{"begin":108,"end":116},"obj":"JJ"},{"id":"tok19","span":{"begin":117,"end":126},"obj":"NNS"},{"id":"tok20","span":{"begin":127,"end":131},"obj":"WDT"},{"id":"tok21","span":{"begin":132,"end":138},"obj":"VBP"},{"id":"tok22","span":{"begin":139,"end":142},"obj":"DT"},{"id":"tok23","span":{"begin":143,"end":152},"obj":"NNP"},{"id":"tok24","span":{"begin":152,"end":153},"obj":"CD"},{"id":"tok25","span":{"begin":154,"end":162},"obj":"NN"},{"id":"tok26","span":{"begin":162,"end":163},"obj":","},{"id":"tok27","span":{"begin":164,"end":170},"obj":"RB"},{"id":"tok28","span":{"begin":171,"end":175},"obj":"IN"},{"id":"tok29","span":{"begin":176,"end":183},"obj":"VBG"},{"id":"tok30","span":{"begin":184,"end":195},"obj":"RB"},{"id":"tok31","span":{"begin":196,"end":198},"obj":"IN"},{"id":"tok32","span":{"begin":199,"end":208},"obj":"VBD"},{"id":"tok33","span":{"begin":209,"end":214},"obj":"NNS"},{"id":"tok34","span":{"begin":215,"end":218},"obj":"CC"},{"id":"tok35","span":{"begin":219,"end":224},"obj":"PRP$"},{"id":"tok36","span":{"begin":225,"end":235},"obj":"NN"},{"id":"tok37","span":{"begin":236,"end":242},"obj":"VBD"},{"id":"tok38","span":{"begin":242,"end":243},"obj":"."},{"id":"lookup1","span":{"begin":69,"end":71},"obj":"stop"},{"id":"lookup2","span":{"begin":77,"end":79},"obj":"country_code"},{"id":"event1","span":{"begin":236,"end":242},"obj":"OCCURRENCE"},{"id":"event2","span":{"begin":95,"end":103},"obj":"OCCURRENCE"},{"id":"event3","span":{"begin":176,"end":183},"obj":"OCCURRENCE"},{"id":"event4","span":{"begin":80,"end":90},"obj":"OCCURRENCE"},{"id":"event5","span":{"begin":72,"end":76},"obj":"I_STATE"},{"id":"event6","span":{"begin":199,"end":208},"obj":"REPORTING"}],"attributes":[{"subj":"tok1","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok2","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok3","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok4","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok5","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok6","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok7","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok8","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok9","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok10","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok11","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok12","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok13","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok14","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok15","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok16","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok17","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok18","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok19","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok20","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok21","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok22","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok23","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok24","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok25","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok26","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok27","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok28","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok29","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok30","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok31","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok32","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok33","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok34","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok35","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok36","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok37","pred":"source","obj":"LitCovid-TimeML"},{"subj":"tok38","pred":"source","obj":"LitCovid-TimeML"},{"subj":"lookup1","pred":"source","obj":"LitCovid-TimeML"},{"subj":"lookup2","pred":"source","obj":"LitCovid-TimeML"},{"subj":"event1","pred":"source","obj":"LitCovid-TimeML"},{"subj":"event2","pred":"source","obj":"LitCovid-TimeML"},{"subj":"event3","pred":"source","obj":"LitCovid-TimeML"},{"subj":"event4","pred":"source","obj":"LitCovid-TimeML"},{"subj":"event5","pred":"source","obj":"LitCovid-TimeML"},{"subj":"event6","pred":"source","obj":"LitCovid-TimeML"}]},{"project":"LitCovid-PD-MONDO-v1","denotations":[{"id":"T1","span":{"begin":143,"end":151},"obj":"Disease"}],"attributes":[{"id":"A1","pred":"mondo_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"subj":"T1","pred":"source","obj":"LitCovid-PD-MONDO-v1"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T1","span":{"begin":143,"end":151},"obj":"Disease"}],"attributes":[{"id":"A1","pred":"mondo_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"subj":"T1","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T1","span":{"begin":0,"end":25},"obj":"Sentence"},{"id":"T2","span":{"begin":26,"end":68},"obj":"Sentence"},{"id":"T3","span":{"begin":69,"end":243},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T1","pred":"source","obj":"LitCovid-sentences"},{"subj":"T2","pred":"source","obj":"LitCovid-sentences"},{"subj":"T3","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"1","span":{"begin":0,"end":15},"obj":"Species"},{"id":"3","span":{"begin":143,"end":153},"obj":"Species"}],"attributes":[{"id":"A1","pred":"tao:has_database_id","subj":"1","obj":"Tax:2697049"},{"id":"A3","pred":"tao:has_database_id","subj":"3","obj":"Tax:2697049"},{"subj":"1","pred":"source","obj":"LitCovid-PubTator"},{"subj":"3","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PAS-Enju","color":"#93eccc","default":true},{"id":"LitCovid-ArguminSci","color":"#ecb293"},{"id":"LitCovid-OGER","color":"#9893ec"},{"id":"LitCovid-OGER-BB","color":"#a7ec93"},{"id":"LitCovid-sentences-v1","color":"#ec93c1"},{"id":"LitCovid-TimeML","color":"#93dbec"},{"id":"LitCovid-PD-MONDO-v1","color":"#ece293"},{"id":"LitCovid-PD-MONDO","color":"#c893ec"},{"id":"LitCovid-sentences","color":"#93ecae"},{"id":"LitCovid-PubTator","color":"#ec9493"}]}]}}