PubMed:32159237 / 1573-1779 JSONTXT

{"project":"LitCovid-OGER-BB","denotations":[{"id":"T52","span":{"begin":49,"end":59},"obj":"SP_7"},{"id":"T53","span":{"begin":101,"end":106},"obj":"SO:0000704"},{"id":"T54","span":{"begin":134,"end":138},"obj":"SO:0000704"},{"id":"T55","span":{"begin":134,"end":149},"obj":"GO:0010467"},{"id":"T56","span":{"begin":176,"end":180},"obj":"SP_10"},{"id":"T57","span":{"begin":182,"end":185},"obj":"SP_2"},{"id":"T58","span":{"begin":186,"end":190},"obj":"SP_10"},{"id":"T59","span":{"begin":196,"end":200},"obj":"SP_9"}],"namespaces":[{"prefix":"NCBITaxon","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"}],"text":"CONCLUSION: Extreme bias and lower ENc values of SARS-CoV-2, especially in Spike, Envelope, and Mpro genes, are suggestive for higher gene expression efficiency, compared with SARS, bat SARS, and MERS CoVs."}

{"project":"LitCovid-PAS-Enju","denotations":[{"id":"EnjuParser_T274","span":{"begin":0,"end":10},"obj":"NN"},{"id":"EnjuParser_T275","span":{"begin":10,"end":11},"obj":"-COLON-"},{"id":"EnjuParser_T276","span":{"begin":12,"end":19},"obj":"JJ"},{"id":"EnjuParser_T277","span":{"begin":20,"end":24},"obj":"NN"},{"id":"EnjuParser_T278","span":{"begin":25,"end":28},"obj":"CC"},{"id":"EnjuParser_T279","span":{"begin":29,"end":34},"obj":"JJR"},{"id":"EnjuParser_T280","span":{"begin":35,"end":38},"obj":"NN"},{"id":"EnjuParser_T281","span":{"begin":39,"end":45},"obj":"NNS"},{"id":"EnjuParser_T282","span":{"begin":46,"end":48},"obj":"IN"},{"id":"EnjuParser_T283","span":{"begin":49,"end":59},"obj":"NN"},{"id":"EnjuParser_T284","span":{"begin":59,"end":60},"obj":"-COMMA-"},{"id":"EnjuParser_T285","span":{"begin":61,"end":71},"obj":"RB"},{"id":"EnjuParser_T286","span":{"begin":72,"end":74},"obj":"IN"},{"id":"EnjuParser_T287","span":{"begin":75,"end":80},"obj":"NNP"},{"id":"EnjuParser_T288","span":{"begin":80,"end":81},"obj":"-COMMA-"},{"id":"EnjuParser_T289","span":{"begin":82,"end":90},"obj":"NNP"},{"id":"EnjuParser_T290","span":{"begin":90,"end":91},"obj":"-COMMA-"},{"id":"EnjuParser_T291","span":{"begin":92,"end":95},"obj":"CC"},{"id":"EnjuParser_T292","span":{"begin":96,"end":100},"obj":"NN"},{"id":"EnjuParser_T293","span":{"begin":101,"end":106},"obj":"NNS"},{"id":"EnjuParser_T294","span":{"begin":106,"end":107},"obj":"-COMMA-"},{"id":"EnjuParser_T295","span":{"begin":108,"end":111},"obj":"VBP"},{"id":"EnjuParser_T296","span":{"begin":112,"end":122},"obj":"JJ"},{"id":"EnjuParser_T297","span":{"begin":123,"end":126},"obj":"IN"},{"id":"EnjuParser_T298","span":{"begin":127,"end":133},"obj":"JJR"},{"id":"EnjuParser_T299","span":{"begin":134,"end":138},"obj":"NN"},{"id":"EnjuParser_T300","span":{"begin":139,"end":149},"obj":"NN"},{"id":"EnjuParser_T301","span":{"begin":150,"end":160},"obj":"NN"},{"id":"EnjuParser_T302","span":{"begin":160,"end":161},"obj":"-COMMA-"},{"id":"EnjuParser_T303","span":{"begin":162,"end":170},"obj":"VBN"},{"id":"EnjuParser_T304","span":{"begin":171,"end":175},"obj":"IN"},{"id":"EnjuParser_T305","span":{"begin":176,"end":180},"obj":"NN"},{"id":"EnjuParser_T306","span":{"begin":180,"end":181},"obj":"-COMMA-"},{"id":"EnjuParser_T307","span":{"begin":182,"end":185},"obj":"NN"},{"id":"EnjuParser_T308","span":{"begin":186,"end":190},"obj":"NNS"},{"id":"EnjuParser_T309","span":{"begin":190,"end":191},"obj":"-COMMA-"},{"id":"EnjuParser_T310","span":{"begin":192,"end":195},"obj":"CC"},{"id":"EnjuParser_T311","span":{"begin":196,"end":200},"obj":"NNP"},{"id":"EnjuParser_T312","span":{"begin":201,"end":205},"obj":"NNP"}],"relations":[{"id":"EnjuParser_R269","pred":"arg1Of","subj":"EnjuParser_T274","obj":"EnjuParser_T275"},{"id":"EnjuParser_R270","pred":"arg1Of","subj":"EnjuParser_T277","obj":"EnjuParser_T276"},{"id":"EnjuParser_R271","pred":"arg1Of","subj":"EnjuParser_T277","obj":"EnjuParser_T278"},{"id":"EnjuParser_R272","pred":"arg2Of","subj":"EnjuParser_T281","obj":"EnjuParser_T278"},{"id":"EnjuParser_R273","pred":"arg1Of","subj":"EnjuParser_T281","obj":"EnjuParser_T279"},{"id":"EnjuParser_R274","pred":"arg1Of","subj":"EnjuParser_T281","obj":"EnjuParser_T280"},{"id":"EnjuParser_R275","pred":"arg1Of","subj":"EnjuParser_T278","obj":"EnjuParser_T282"},{"id":"EnjuParser_R276","pred":"arg2Of","subj":"EnjuParser_T291","obj":"EnjuParser_T282"},{"id":"EnjuParser_R277","pred":"arg1Of","subj":"EnjuParser_T283","obj":"EnjuParser_T284"},{"id":"EnjuParser_R278","pred":"arg1Of","subj":"EnjuParser_T286","obj":"EnjuParser_T285"},{"id":"EnjuParser_R279","pred":"arg1Of","subj":"EnjuParser_T283","obj":"EnjuParser_T286"},{"id":"EnjuParser_R280","pred":"arg2Of","subj":"EnjuParser_T287","obj":"EnjuParser_T286"},{"id":"EnjuParser_R281","pred":"arg1Of","subj":"EnjuParser_T283","obj":"EnjuParser_T288"},{"id":"EnjuParser_R282","pred":"arg2Of","subj":"EnjuParser_T289","obj":"EnjuParser_T288"},{"id":"EnjuParser_R283","pred":"arg1Of","subj":"EnjuParser_T291","obj":"EnjuParser_T290"},{"id":"EnjuParser_R284","pred":"arg1Of","subj":"EnjuParser_T288","obj":"EnjuParser_T291"},{"id":"EnjuParser_R285","pred":"arg2Of","subj":"EnjuParser_T293","obj":"EnjuParser_T291"},{"id":"EnjuParser_R286","pred":"arg1Of","subj":"EnjuParser_T293","obj":"EnjuParser_T292"},{"id":"EnjuParser_R287","pred":"arg1Of","subj":"EnjuParser_T295","obj":"EnjuParser_T294"},{"id":"EnjuParser_R288","pred":"arg1Of","subj":"EnjuParser_T278","obj":"EnjuParser_T295"},{"id":"EnjuParser_R289","pred":"arg2Of","subj":"EnjuParser_T296","obj":"EnjuParser_T295"},{"id":"EnjuParser_R290","pred":"arg1Of","subj":"EnjuParser_T278","obj":"EnjuParser_T296"},{"id":"EnjuParser_R291","pred":"arg1Of","subj":"EnjuParser_T296","obj":"EnjuParser_T297"},{"id":"EnjuParser_R292","pred":"arg2Of","subj":"EnjuParser_T301","obj":"EnjuParser_T297"},{"id":"EnjuParser_R293","pred":"arg1Of","subj":"EnjuParser_T301","obj":"EnjuParser_T298"},{"id":"EnjuParser_R294","pred":"arg1Of","subj":"EnjuParser_T301","obj":"EnjuParser_T299"},{"id":"EnjuParser_R295","pred":"arg1Of","subj":"EnjuParser_T301","obj":"EnjuParser_T300"},{"id":"EnjuParser_R296","pred":"arg1Of","subj":"EnjuParser_T295","obj":"EnjuParser_T302"},{"id":"EnjuParser_R297","pred":"arg1Of","subj":"EnjuParser_T295","obj":"EnjuParser_T303"},{"id":"EnjuParser_R298","pred":"arg2Of","subj":"EnjuParser_T304","obj":"EnjuParser_T303"},{"id":"EnjuParser_R299","pred":"arg2Of","subj":"EnjuParser_T310","obj":"EnjuParser_T304"},{"id":"EnjuParser_R300","pred":"arg1Of","subj":"EnjuParser_T305","obj":"EnjuParser_T306"},{"id":"EnjuParser_R301","pred":"arg2Of","subj":"EnjuParser_T308","obj":"EnjuParser_T306"},{"id":"EnjuParser_R302","pred":"arg1Of","subj":"EnjuParser_T308","obj":"EnjuParser_T307"},{"id":"EnjuParser_R303","pred":"arg1Of","subj":"EnjuParser_T310","obj":"EnjuParser_T309"},{"id":"EnjuParser_R304","pred":"arg1Of","subj":"EnjuParser_T306","obj":"EnjuParser_T310"},{"id":"EnjuParser_R305","pred":"arg2Of","subj":"EnjuParser_T312","obj":"EnjuParser_T310"},{"id":"EnjuParser_R306","pred":"arg1Of","subj":"EnjuParser_T312","obj":"EnjuParser_T311"}],"text":"CONCLUSION: Extreme bias and lower ENc values of SARS-CoV-2, especially in Spike, Envelope, and Mpro genes, are suggestive for higher gene expression efficiency, compared with SARS, bat SARS, and MERS CoVs."}

{"project":"LitCovid-ArguminSci","denotations":[{"id":"T10","span":{"begin":0,"end":206},"obj":"DRI_Challenge"}],"text":"CONCLUSION: Extreme bias and lower ENc values of SARS-CoV-2, especially in Spike, Envelope, and Mpro genes, are suggestive for higher gene expression efficiency, compared with SARS, bat SARS, and MERS CoVs."}

{"project":"LitCovid-OGER","denotations":[{"id":"T2","span":{"begin":134,"end":149},"obj":"GO:0010467"},{"id":"T5","span":{"begin":82,"end":90},"obj":"GO:0031975"},{"id":"T20","span":{"begin":49,"end":53},"obj":"PR:000014459"},{"id":"T21","span":{"begin":176,"end":180},"obj":"PR:000014459"},{"id":"T22","span":{"begin":186,"end":190},"obj":"PR:000014459"},{"id":"T19","span":{"begin":101,"end":106},"obj":"SO:0000704"},{"id":"T20","span":{"begin":108,"end":111},"obj":"SO:0001853"},{"id":"T21","span":{"begin":134,"end":138},"obj":"SO:0000704"}],"namespaces":[{"prefix":"PR","uri":"http://purl.obolibrary.org/obo/PR_"},{"prefix":"UBERON","uri":"http://purl.obolibrary.org/obo/UBERON_"}],"text":"CONCLUSION: Extreme bias and lower ENc values of SARS-CoV-2, especially in Spike, Envelope, and Mpro genes, are suggestive for higher gene expression efficiency, compared with SARS, bat SARS, and MERS CoVs."}

{"project":"LitCovid-PubTatorCentral","denotations":[{"id":"T6","span":{"begin":196,"end":200},"obj":"Species:1335626"}],"text":"CONCLUSION: Extreme bias and lower ENc values of SARS-CoV-2, especially in Spike, Envelope, and Mpro genes, are suggestive for higher gene expression efficiency, compared with SARS, bat SARS, and MERS CoVs."}

{"project":"LitCovid-sentences-v1","denotations":[{"id":"TextSentencer_T14","span":{"begin":0,"end":11},"obj":"Sentence"},{"id":"TextSentencer_T15","span":{"begin":12,"end":206},"obj":"Sentence"}],"text":"CONCLUSION: Extreme bias and lower ENc values of SARS-CoV-2, especially in Spike, Envelope, and Mpro genes, are suggestive for higher gene expression efficiency, compared with SARS, bat SARS, and MERS CoVs."}

{"project":"LitCovid-PD-MONDO-v1","denotations":[{"id":"T20","span":{"begin":49,"end":57},"obj":"Disease"},{"id":"T21","span":{"begin":176,"end":180},"obj":"Disease"},{"id":"T22","span":{"begin":186,"end":190},"obj":"Disease"}],"attributes":[{"id":"A20","pred":"mondo_id","subj":"T20","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A21","pred":"mondo_id","subj":"T21","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A22","pred":"mondo_id","subj":"T22","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":"CONCLUSION: Extreme bias and lower ENc values of SARS-CoV-2, especially in Spike, Envelope, and Mpro genes, are suggestive for higher gene expression efficiency, compared with SARS, bat SARS, and MERS CoVs."}

{"project":"LitCovid-PD-FMA-UBERON-v1","denotations":[{"id":"T11","span":{"begin":134,"end":138},"obj":"Body_part"}],"attributes":[{"id":"A11","pred":"fma_id","subj":"T11","obj":"http://purl.org/sig/ont/fma/fma74402"}],"text":"CONCLUSION: Extreme bias and lower ENc values of SARS-CoV-2, especially in Spike, Envelope, and Mpro genes, are suggestive for higher gene expression efficiency, compared with SARS, bat SARS, and MERS CoVs."}

{"project":"LitCovid-TimeML","denotations":[{"id":"tok297","span":{"begin":0,"end":10},"obj":"NNP"},{"id":"tok298","span":{"begin":10,"end":11},"obj":":"},{"id":"tok299","span":{"begin":12,"end":19},"obj":"NNP"},{"id":"tok300","span":{"begin":20,"end":24},"obj":"NN"},{"id":"tok301","span":{"begin":25,"end":28},"obj":"CC"},{"id":"tok302","span":{"begin":29,"end":34},"obj":"JJR"},{"id":"tok303","span":{"begin":35,"end":38},"obj":"NNP"},{"id":"tok304","span":{"begin":39,"end":45},"obj":"NNS"},{"id":"tok305","span":{"begin":46,"end":48},"obj":"IN"},{"id":"tok306","span":{"begin":49,"end":58},"obj":"NNP"},{"id":"tok307","span":{"begin":58,"end":59},"obj":"CD"},{"id":"tok308","span":{"begin":59,"end":60},"obj":","},{"id":"tok309","span":{"begin":61,"end":71},"obj":"RB"},{"id":"tok310","span":{"begin":72,"end":74},"obj":"IN"},{"id":"tok311","span":{"begin":75,"end":80},"obj":"NNP"},{"id":"tok312","span":{"begin":80,"end":81},"obj":","},{"id":"tok313","span":{"begin":82,"end":90},"obj":"NNP"},{"id":"tok314","span":{"begin":90,"end":91},"obj":","},{"id":"tok315","span":{"begin":92,"end":95},"obj":"CC"},{"id":"tok316","span":{"begin":96,"end":100},"obj":"NNP"},{"id":"tok317","span":{"begin":101,"end":106},"obj":"NNS"},{"id":"tok318","span":{"begin":106,"end":107},"obj":","},{"id":"tok319","span":{"begin":108,"end":111},"obj":"VBP"},{"id":"tok320","span":{"begin":112,"end":122},"obj":"JJ"},{"id":"tok321","span":{"begin":123,"end":126},"obj":"IN"},{"id":"tok322","span":{"begin":127,"end":133},"obj":"JJR"},{"id":"tok323","span":{"begin":134,"end":138},"obj":"NN"},{"id":"tok324","span":{"begin":139,"end":149},"obj":"NN"},{"id":"tok325","span":{"begin":150,"end":160},"obj":"NN"},{"id":"tok326","span":{"begin":160,"end":161},"obj":","},{"id":"tok327","span":{"begin":162,"end":170},"obj":"VBN"},{"id":"tok328","span":{"begin":171,"end":175},"obj":"IN"},{"id":"tok329","span":{"begin":176,"end":180},"obj":"NNP"},{"id":"tok330","span":{"begin":180,"end":181},"obj":","},{"id":"tok331","span":{"begin":182,"end":185},"obj":"NN"},{"id":"tok332","span":{"begin":186,"end":190},"obj":"NNP"},{"id":"tok333","span":{"begin":190,"end":191},"obj":","},{"id":"tok334","span":{"begin":192,"end":195},"obj":"CC"},{"id":"tok335","span":{"begin":196,"end":200},"obj":"NNP"},{"id":"tok336","span":{"begin":201,"end":205},"obj":"NNP"},{"id":"tok337","span":{"begin":205,"end":206},"obj":"."},{"id":"lookup30","span":{"begin":72,"end":74},"obj":"country_code"},{"id":"lookup31","span":{"begin":134,"end":138},"obj":"person_first"}],"text":"CONCLUSION: Extreme bias and lower ENc values of SARS-CoV-2, especially in Spike, Envelope, and Mpro genes, are suggestive for higher gene expression efficiency, compared with SARS, bat SARS, and MERS CoVs."}