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Glycan-GlyCosmos

Id Subject Object Predicate Lexical cue image
T1 1448-1456 Glycan denotes arabinan https://api.glycosmos.org/wurcs2image/latest/png/binary/G22535ZZ

GlyCosmos-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T1 1448-1456 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes arabinan http://www.glycoepitope.jp/epitopes/EP0508

GlyCosmos15-NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 618-623 OrganismTaxon denotes fungi 4751
T2 1433-1438 OrganismTaxon denotes niger 4230
T3 1597-1602 OrganismTaxon denotes fungi 4751

GlyCosmos15-Sentences

Id Subject Object Predicate Lexical cue
T1 0-133 Sentence denotes Rational Design of Mechanism-Based Inhibitors and Activity-Based Probes for the Identification of Retaining α-l-Arabinofuranosidases.
T2 134-348 Sentence denotes Identifying and characterizing the enzymes responsible for an observed activity within a complex eukaryotic catabolic system remains one of the most significant challenges in the study of biomass-degrading systems.
T3 349-545 Sentence denotes The debranching of both complex hemicellulosic and pectinaceous polysaccharides requires the production of α-l-arabinofuranosidases among a wide variety of coexpressed carbohydrate-active enzymes.
T4 546-738 Sentence denotes To selectively detect and identify α-l-arabinofuranosidases produced by fungi grown on complex biomass, potential covalent inhibitors and probes which mimic α-l-arabinofuranosides were sought.
T5 739-899 Sentence denotes The conformational free energy landscapes of free α-l-arabinofuranose and several rationally designed covalent α-l-arabinofuranosidase inhibitors were analyzed.
T6 900-1007 Sentence denotes A synthetic route to these inhibitors was subsequently developed based on a key Wittig-Still rearrangement.
T7 1008-1244 Sentence denotes Through a combination of kinetic measurements, intact mass spectrometry, and structural experiments, the designed inhibitors were shown to efficiently label the catalytic nucleophiles of retaining GH51 and GH54 α-l-arabinofuranosidases.
T8 1245-1457 Sentence denotes Activity-based probes elaborated from an inhibitor with an aziridine warhead were applied to the identification and characterization of α-l-arabinofuranosidases within the secretome of A. niger grown on arabinan.
T9 1458-1628 Sentence denotes This method was extended to the detection and identification of α-l-arabinofuranosidases produced by eight biomass-degrading basidiomycete fungi grown on complex biomass.
T10 1629-1907 Sentence denotes The broad applicability of the cyclophellitol-derived activity-based probes and inhibitors presented here make them a valuable new tool in the characterization of complex eukaryotic carbohydrate-degrading systems and in the high-throughput discovery of α-l-arabinofuranosidases.

GlyCosmos15-Glycan

Id Subject Object Predicate Lexical cue image
T1 1448-1456 Glycan denotes arabinan https://api.glycosmos.org/wurcs2image/latest/png/binary/G22535ZZ

GlyCosmos15-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T1 1448-1456 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes arabinan http://www.glycoepitope.jp/epitopes/EP0508

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 618-623 OrganismTaxon denotes fungi 4751
T2 1433-1438 OrganismTaxon denotes niger 4230
T3 1597-1602 OrganismTaxon denotes fungi 4751