PubMed:32027573
Annnotations
LitCovid-OGER-BB
{"project":"LitCovid-OGER-BB","denotations":[{"id":"T1","span":{"begin":20,"end":31},"obj":"NCBITaxon:11118"},{"id":"T2","span":{"begin":33,"end":42},"obj":"SP_7"},{"id":"T3","span":{"begin":69,"end":74},"obj":"UBERON:0001443"},{"id":"T4","span":{"begin":115,"end":126},"obj":"NCBITaxon:11118"},{"id":"T5","span":{"begin":128,"end":137},"obj":"SP_7"},{"id":"T6","span":{"begin":275,"end":284},"obj":"SP_7"},{"id":"T7","span":{"begin":298,"end":304},"obj":"NCBITaxon:9606"},{"id":"T8","span":{"begin":416,"end":425},"obj":"SP_7"},{"id":"T9","span":{"begin":455,"end":476},"obj":"GO:0001171"},{"id":"T10","span":{"begin":666,"end":677},"obj":"NCBITaxon:1"},{"id":"T11","span":{"begin":825,"end":841},"obj":"CL:0000738"},{"id":"T12","span":{"begin":831,"end":836},"obj":"UBERON:0000178"},{"id":"T13","span":{"begin":865,"end":875},"obj":"CL:0000775"},{"id":"T14","span":{"begin":960,"end":970},"obj":"CL:0000542"},{"id":"T15","span":{"begin":1084,"end":1096},"obj":"UBERON:0001066"},{"id":"T16","span":{"begin":1097,"end":1103},"obj":"UBERON:0003037"},{"id":"T17","span":{"begin":1315,"end":1319},"obj":"UBERON:0002048"},{"id":"T18","span":{"begin":1389,"end":1394},"obj":"UBERON:0000170"},{"id":"T19","span":{"begin":1460,"end":1464},"obj":"UBERON:0002048"},{"id":"T20","span":{"begin":1658,"end":1662},"obj":"UBERON:0002048"},{"id":"T21","span":{"begin":1984,"end":1989},"obj":"UBERON:0000170"},{"id":"T22","span":{"begin":2038,"end":2055},"obj":"CL:0000738"},{"id":"T23","span":{"begin":2044,"end":2049},"obj":"UBERON:0000178"},{"id":"T24","span":{"begin":2134,"end":2145},"obj":"NCBITaxon:11118"},{"id":"T25","span":{"begin":2147,"end":2156},"obj":"SP_7"}],"namespaces":[{"prefix":"NCBITaxon","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"}],"text":"Emerging 2019 Novel Coronavirus (2019-nCoV) Pneumonia.\nBackgroundThe chest CT findings of patients with 2019 Novel Coronavirus (2019-nCoV) pneumonia have not previously been described in detail.PurposeTo investigate the clinical, laboratory, and imaging findings of emerging 2019-nCoV pneumonia in humans.Materials and MethodsFifty-one patients (25 men and 26 women; age range 16-76 years) with laboratory-confirmed 2019-nCoV infection by using real-time reverse transcription polymerase chain reaction underwent thin-section CT. The imaging findings, clinical data, and laboratory data were evaluated.ResultsFifty of 51 patients (98%) had a history of contact with individuals from the endemic center in Wuhan, China. Fever (49 of 51, 96%) and cough (24 of 51, 47%) were the most common symptoms. Most patients had a normal white blood cell count (37 of 51, 73%), neutrophil count (44 of 51, 86%), and either normal (17 of 51, 35%) or reduced (33 of 51, 65%) lymphocyte count. CT images showed pure ground-glass opacity (GGO) in 39 of 51 (77%) patients and GGO with reticular and/or interlobular septal thickening in 38 of 51 (75%) patients. GGO with consolidation was present in 30 of 51 (59%) patients, and pure consolidation was present in 28 of 51 (55%) patients. Forty-four of 51 (86%) patients had bilateral lung involvement, while 41 of 51 (80%) involved the posterior part of the lungs and 44 of 51 (86%) were peripheral. There were more consolidated lung lesions in patients 5 days or more from disease onset to CT scan versus 4 days or fewer (431 of 712 lesions vs 129 of 612 lesions; P \u003c .001). Patients older than 50 years had more consolidated lung lesions than did those aged 50 years or younger (212 of 470 vs 198 of 854; P \u003c .001). Follow-up CT in 13 patients showed improvement in seven (54%) patients and progression in four (31%) patients.ConclusionPatients with fever and/or cough and with conspicuous ground-glass opacity lesions in the peripheral and posterior lungs on CT images, combined with normal or decreased white blood cells and a history of epidemic exposure, are highly suspected of having 2019 Novel Coronavirus (2019-nCoV) pneumonia.© RSNA, 2020."}
LitCovid-PAS-Enju
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"EnjuParser_R399","pred":"arg1Of","subj":"EnjuParser_T400","obj":"EnjuParser_T401"},{"id":"EnjuParser_R400","pred":"arg2Of","subj":"EnjuParser_T405","obj":"EnjuParser_T401"},{"id":"EnjuParser_R401","pred":"arg2Of","subj":"EnjuParser_T405","obj":"EnjuParser_T402"},{"id":"EnjuParser_R402","pred":"arg1Of","subj":"EnjuParser_T405","obj":"EnjuParser_T403"},{"id":"EnjuParser_R403","pred":"arg1Of","subj":"EnjuParser_T405","obj":"EnjuParser_T404"},{"id":"EnjuParser_R404","pred":"arg1Of","subj":"EnjuParser_T360","obj":"EnjuParser_T406"},{"id":"EnjuParser_R405","pred":"arg2Of","subj":"EnjuParser_T415","obj":"EnjuParser_T406"},{"id":"EnjuParser_R406","pred":"arg1Of","subj":"EnjuParser_T408","obj":"EnjuParser_T407"},{"id":"EnjuParser_R407","pred":"arg1Of","subj":"EnjuParser_T408","obj":"EnjuParser_T409"},{"id":"EnjuParser_R408","pred":"arg2Of","subj":"EnjuParser_T411","obj":"EnjuParser_T409"},{"id":"EnjuParser_R409","pred":"arg1Of","subj":"EnjuParser_T411","obj":"EnjuParser_T410"},{"id":"EnjuParser_R410","pred":"arg1Of","subj":"EnjuParser_T415","obj":"EnjuParser_T412"},{"id":"EnjuParser_R411","pred":"arg1Of","subj":"EnjuParser_T408","obj":"EnjuParser_T413"},{"id":"EnjuParser_R412","pred":"arg2Of","subj":"EnjuParser_T415","obj":"EnjuParser_T413"},{"id":"EnjuParser_R413","pred":"arg1Of","subj":"EnjuParser_T415","obj":"EnjuParser_T414"},{"id":"EnjuParser_R414","pred":"arg2Of","subj":"EnjuParser_T408","obj":"EnjuParser_T415"},{"id":"EnjuParser_R415","pred":"arg1Of","subj":"EnjuParser_T415","obj":"EnjuParser_T416"},{"id":"EnjuParser_R416","pred":"arg2Of","subj":"EnjuParser_T417","obj":"EnjuParser_T416"},{"id":"EnjuParser_R417","pred":"arg1Of","subj":"EnjuParser_T408","obj":"EnjuParser_T417"},{"id":"EnjuParser_R418","pred":"arg2Of","subj":"EnjuParser_T425","obj":"EnjuParser_T417"},{"id":"EnjuParser_R419","pred":"arg1Of","subj":"EnjuParser_T425","obj":"EnjuParser_T418"},{"id":"EnjuParser_R420","pred":"arg1Of","subj":"EnjuParser_T425","obj":"EnjuParser_T419"},{"id":"EnjuParser_R421","pred":"arg1Of","subj":"EnjuParser_T425","obj":"EnjuParser_T420"},{"id":"EnjuParser_R422","pred":"arg1Of","subj":"EnjuParser_T425","obj":"EnjuParser_T421"},{"id":"EnjuParser_R423","pred":"arg2Of","subj":"EnjuParser_T422","obj":"EnjuParser_T421"},{"id":"EnjuParser_R424","pred":"arg3Of","subj":"EnjuParser_T423","obj":"EnjuParser_T421"},{"id":"EnjuParser_R425","pred":"arg1Of","subj":"EnjuParser_T425","obj":"EnjuParser_T424"},{"id":"EnjuParser_R426","pred":"arg1Of","subj":"EnjuParser_T425","obj":"EnjuParser_T426"},{"id":"EnjuParser_R427","pred":"arg2Of","subj":"EnjuParser_T427","obj":"EnjuParser_T426"}],"text":"Emerging 2019 Novel Coronavirus (2019-nCoV) Pneumonia.\nBackgroundThe chest CT findings of patients with 2019 Novel Coronavirus (2019-nCoV) pneumonia have not previously been described in detail.PurposeTo investigate the clinical, laboratory, and imaging findings of emerging 2019-nCoV pneumonia in humans.Materials and MethodsFifty-one patients (25 men and 26 women; age range 16-76 years) with laboratory-confirmed 2019-nCoV infection by using real-time reverse transcription polymerase chain reaction underwent thin-section CT. The imaging findings, clinical data, and laboratory data were evaluated.ResultsFifty of 51 patients (98%) had a history of contact with individuals from the endemic center in Wuhan, China. Fever (49 of 51, 96%) and cough (24 of 51, 47%) were the most common symptoms. Most patients had a normal white blood cell count (37 of 51, 73%), neutrophil count (44 of 51, 86%), and either normal (17 of 51, 35%) or reduced (33 of 51, 65%) lymphocyte count. CT images showed pure ground-glass opacity (GGO) in 39 of 51 (77%) patients and GGO with reticular and/or interlobular septal thickening in 38 of 51 (75%) patients. GGO with consolidation was present in 30 of 51 (59%) patients, and pure consolidation was present in 28 of 51 (55%) patients. Forty-four of 51 (86%) patients had bilateral lung involvement, while 41 of 51 (80%) involved the posterior part of the lungs and 44 of 51 (86%) were peripheral. There were more consolidated lung lesions in patients 5 days or more from disease onset to CT scan versus 4 days or fewer (431 of 712 lesions vs 129 of 612 lesions; P \u003c .001). Patients older than 50 years had more consolidated lung lesions than did those aged 50 years or younger (212 of 470 vs 198 of 854; P \u003c .001). Follow-up CT in 13 patients showed improvement in seven (54%) patients and progression in four (31%) patients.ConclusionPatients with fever and/or cough and with conspicuous ground-glass opacity lesions in the peripheral and posterior lungs on CT images, combined with normal or decreased white blood cells and a history of epidemic exposure, are highly suspected of having 2019 Novel Coronavirus (2019-nCoV) pneumonia.© RSNA, 2020."}
LitCovid-ArguminSci
{"project":"LitCovid-ArguminSci","denotations":[{"id":"T1","span":{"begin":55,"end":394},"obj":"DRI_Background"},{"id":"T2","span":{"begin":426,"end":529},"obj":"DRI_Background"},{"id":"T3","span":{"begin":530,"end":718},"obj":"DRI_Background"},{"id":"T4","span":{"begin":719,"end":797},"obj":"DRI_Background"},{"id":"T5","span":{"begin":798,"end":977},"obj":"DRI_Background"},{"id":"T6","span":{"begin":1143,"end":1268},"obj":"DRI_Background"},{"id":"T7","span":{"begin":1269,"end":1430},"obj":"DRI_Outcome"},{"id":"T8","span":{"begin":1431,"end":1606},"obj":"DRI_Background"},{"id":"T9","span":{"begin":1607,"end":1748},"obj":"DRI_Background"},{"id":"T10","span":{"begin":1749,"end":2157},"obj":"DRI_Outcome"},{"id":"T11","span":{"begin":2174,"end":2181},"obj":"DRI_Outcome"}],"text":"Emerging 2019 Novel Coronavirus (2019-nCoV) Pneumonia.\nBackgroundThe chest CT findings of patients with 2019 Novel Coronavirus (2019-nCoV) pneumonia have not previously been described in detail.PurposeTo investigate the clinical, laboratory, and imaging findings of emerging 2019-nCoV pneumonia in humans.Materials and MethodsFifty-one patients (25 men and 26 women; age range 16-76 years) with laboratory-confirmed 2019-nCoV infection by using real-time reverse transcription polymerase chain reaction underwent thin-section CT. The imaging findings, clinical data, and laboratory data were evaluated.ResultsFifty of 51 patients (98%) had a history of contact with individuals from the endemic center in Wuhan, China. Fever (49 of 51, 96%) and cough (24 of 51, 47%) were the most common symptoms. Most patients had a normal white blood cell count (37 of 51, 73%), neutrophil count (44 of 51, 86%), and either normal (17 of 51, 35%) or reduced (33 of 51, 65%) lymphocyte count. CT images showed pure ground-glass opacity (GGO) in 39 of 51 (77%) patients and GGO with reticular and/or interlobular septal thickening in 38 of 51 (75%) patients. GGO with consolidation was present in 30 of 51 (59%) patients, and pure consolidation was present in 28 of 51 (55%) patients. Forty-four of 51 (86%) patients had bilateral lung involvement, while 41 of 51 (80%) involved the posterior part of the lungs and 44 of 51 (86%) were peripheral. There were more consolidated lung lesions in patients 5 days or more from disease onset to CT scan versus 4 days or fewer (431 of 712 lesions vs 129 of 612 lesions; P \u003c .001). Patients older than 50 years had more consolidated lung lesions than did those aged 50 years or younger (212 of 470 vs 198 of 854; P \u003c .001). Follow-up CT in 13 patients showed improvement in seven (54%) patients and progression in four (31%) patients.ConclusionPatients with fever and/or cough and with conspicuous ground-glass opacity lesions in the peripheral and posterior lungs on CT images, combined with normal or decreased white blood cells and a history of epidemic exposure, are highly suspected of having 2019 Novel Coronavirus (2019-nCoV) pneumonia.© RSNA, 2020."}
LitCovid-OGER
{"project":"LitCovid-OGER","denotations":[{"id":"T1","span":{"begin":825,"end":841},"obj":"CL:0000738"},{"id":"T2","span":{"begin":865,"end":875},"obj":"CL:0000775"},{"id":"T3","span":{"begin":960,"end":970},"obj":"CL:0000542"},{"id":"T4","span":{"begin":2038,"end":2055},"obj":"CL:0000738"},{"id":"T1","span":{"begin":455,"end":476},"obj":"GO:0001171"},{"id":"T1","span":{"begin":488,"end":502},"obj":"MOP:0000635"},{"id":"T1","span":{"begin":995,"end":999},"obj":"PR:000023640;PR:Q54QE4"},{"id":"T2","span":{"begin":1210,"end":1214},"obj":"PR:000023640;PR:Q54QE4"},{"id":"T1","span":{"begin":455,"end":462},"obj":"SO:0001031"},{"id":"T2","span":{"begin":463,"end":476},"obj":"SO:0000673"},{"id":"T3","span":{"begin":2092,"end":2095},"obj":"SO:0001853"},{"id":"T1","span":{"begin":69,"end":74},"obj":"UBERON:0001443"},{"id":"T2","span":{"begin":831,"end":836},"obj":"UBERON:0000178"},{"id":"T3","span":{"begin":1315,"end":1319},"obj":"UBERON:0002048"},{"id":"T4","span":{"begin":1389,"end":1394},"obj":"UBERON:0000170"},{"id":"T5","span":{"begin":1460,"end":1464},"obj":"UBERON:0002048"},{"id":"T6","span":{"begin":1658,"end":1662},"obj":"UBERON:0002048"},{"id":"T7","span":{"begin":1984,"end":1989},"obj":"UBERON:0000170"},{"id":"T8","span":{"begin":2044,"end":2049},"obj":"UBERON:0000178"}],"namespaces":[{"prefix":"PR","uri":"http://purl.obolibrary.org/obo/PR_"},{"prefix":"UBERON","uri":"http://purl.obolibrary.org/obo/UBERON_"}],"text":"Emerging 2019 Novel Coronavirus (2019-nCoV) Pneumonia.\nBackgroundThe chest CT findings of patients with 2019 Novel Coronavirus (2019-nCoV) pneumonia have not previously been described in detail.PurposeTo investigate the clinical, laboratory, and imaging findings of emerging 2019-nCoV pneumonia in humans.Materials and MethodsFifty-one patients (25 men and 26 women; age range 16-76 years) with laboratory-confirmed 2019-nCoV infection by using real-time reverse transcription polymerase chain reaction underwent thin-section CT. The imaging findings, clinical data, and laboratory data were evaluated.ResultsFifty of 51 patients (98%) had a history of contact with individuals from the endemic center in Wuhan, China. Fever (49 of 51, 96%) and cough (24 of 51, 47%) were the most common symptoms. Most patients had a normal white blood cell count (37 of 51, 73%), neutrophil count (44 of 51, 86%), and either normal (17 of 51, 35%) or reduced (33 of 51, 65%) lymphocyte count. CT images showed pure ground-glass opacity (GGO) in 39 of 51 (77%) patients and GGO with reticular and/or interlobular septal thickening in 38 of 51 (75%) patients. GGO with consolidation was present in 30 of 51 (59%) patients, and pure consolidation was present in 28 of 51 (55%) patients. Forty-four of 51 (86%) patients had bilateral lung involvement, while 41 of 51 (80%) involved the posterior part of the lungs and 44 of 51 (86%) were peripheral. There were more consolidated lung lesions in patients 5 days or more from disease onset to CT scan versus 4 days or fewer (431 of 712 lesions vs 129 of 612 lesions; P \u003c .001). Patients older than 50 years had more consolidated lung lesions than did those aged 50 years or younger (212 of 470 vs 198 of 854; P \u003c .001). Follow-up CT in 13 patients showed improvement in seven (54%) patients and progression in four (31%) patients.ConclusionPatients with fever and/or cough and with conspicuous ground-glass opacity lesions in the peripheral and posterior lungs on CT images, combined with normal or decreased white blood cells and a history of epidemic exposure, are highly suspected of having 2019 Novel Coronavirus (2019-nCoV) pneumonia.© RSNA, 2020."}
LitCovid-PubTatorCentral
{"project":"LitCovid-PubTatorCentral","denotations":[{"id":"T1","span":{"begin":90,"end":98},"obj":"Species:9606"},{"id":"T2","span":{"begin":104,"end":148},"obj":"Disease:MESH:D018352"},{"id":"T3","span":{"begin":266,"end":294},"obj":"Disease:MESH:D018352"},{"id":"T4","span":{"begin":298,"end":304},"obj":"Species:9606"},{"id":"T5","span":{"begin":336,"end":344},"obj":"Species:9606"},{"id":"T6","span":{"begin":349,"end":352},"obj":"Species:9606"},{"id":"T7","span":{"begin":360,"end":365},"obj":"Species:9606"},{"id":"T8","span":{"begin":421,"end":430},"obj":"Disease:MESH:D011014"},{"id":"T9","span":{"begin":621,"end":629},"obj":"Species:9606"},{"id":"T10","span":{"begin":803,"end":811},"obj":"Species:9606"},{"id":"T11","span":{"begin":1045,"end":1053},"obj":"Species:9606"},{"id":"T12","span":{"begin":1133,"end":1141},"obj":"Species:9606"},{"id":"T13","span":{"begin":1259,"end":1267},"obj":"Species:9606"},{"id":"T14","span":{"begin":1292,"end":1300},"obj":"Species:9606"},{"id":"T15","span":{"begin":1476,"end":1484},"obj":"Species:9606"},{"id":"T16","span":{"begin":1607,"end":1615},"obj":"Species:9606"},{"id":"T17","span":{"begin":1768,"end":1776},"obj":"Species:9606"},{"id":"T18","span":{"begin":1811,"end":1819},"obj":"Species:9606"},{"id":"T19","span":{"begin":1850,"end":1858},"obj":"Species:9606"},{"id":"T20","span":{"begin":1869,"end":1877},"obj":"Species:9606"},{"id":"T21","span":{"begin":1883,"end":1888},"obj":"Disease:MESH:D005334"},{"id":"T22","span":{"begin":1936,"end":1951},"obj":"Disease:MESH:D003318"},{"id":"T23","span":{"begin":2152,"end":2167},"obj":"Disease:MESH:D011014"}],"text":"Emerging 2019 Novel Coronavirus (2019-nCoV) Pneumonia.\nBackgroundThe chest CT findings of patients with 2019 Novel Coronavirus (2019-nCoV) pneumonia have not previously been described in detail.PurposeTo investigate the clinical, laboratory, and imaging findings of emerging 2019-nCoV pneumonia in humans.Materials and MethodsFifty-one patients (25 men and 26 women; age range 16-76 years) with laboratory-confirmed 2019-nCoV infection by using real-time reverse transcription polymerase chain reaction underwent thin-section CT. The imaging findings, clinical data, and laboratory data were evaluated.ResultsFifty of 51 patients (98%) had a history of contact with individuals from the endemic center in Wuhan, China. Fever (49 of 51, 96%) and cough (24 of 51, 47%) were the most common symptoms. Most patients had a normal white blood cell count (37 of 51, 73%), neutrophil count (44 of 51, 86%), and either normal (17 of 51, 35%) or reduced (33 of 51, 65%) lymphocyte count. CT images showed pure ground-glass opacity (GGO) in 39 of 51 (77%) patients and GGO with reticular and/or interlobular septal thickening in 38 of 51 (75%) patients. GGO with consolidation was present in 30 of 51 (59%) patients, and pure consolidation was present in 28 of 51 (55%) patients. Forty-four of 51 (86%) patients had bilateral lung involvement, while 41 of 51 (80%) involved the posterior part of the lungs and 44 of 51 (86%) were peripheral. There were more consolidated lung lesions in patients 5 days or more from disease onset to CT scan versus 4 days or fewer (431 of 712 lesions vs 129 of 612 lesions; P \u003c .001). Patients older than 50 years had more consolidated lung lesions than did those aged 50 years or younger (212 of 470 vs 198 of 854; P \u003c .001). Follow-up CT in 13 patients showed improvement in seven (54%) patients and progression in four (31%) patients.ConclusionPatients with fever and/or cough and with conspicuous ground-glass opacity lesions in the peripheral and posterior lungs on CT images, combined with normal or decreased white blood cells and a history of epidemic exposure, are highly suspected of having 2019 Novel Coronavirus (2019-nCoV) pneumonia.© RSNA, 2020."}
LitCovid-sentences-v1
{"project":"LitCovid-sentences-v1","denotations":[{"id":"TextSentencer_T1","span":{"begin":0,"end":54},"obj":"Sentence"},{"id":"TextSentencer_T2","span":{"begin":55,"end":529},"obj":"Sentence"},{"id":"TextSentencer_T3","span":{"begin":530,"end":718},"obj":"Sentence"},{"id":"TextSentencer_T4","span":{"begin":719,"end":797},"obj":"Sentence"},{"id":"TextSentencer_T5","span":{"begin":798,"end":977},"obj":"Sentence"},{"id":"TextSentencer_T6","span":{"begin":978,"end":1142},"obj":"Sentence"},{"id":"TextSentencer_T7","span":{"begin":1143,"end":1268},"obj":"Sentence"},{"id":"TextSentencer_T8","span":{"begin":1269,"end":1430},"obj":"Sentence"},{"id":"TextSentencer_T9","span":{"begin":1431,"end":1606},"obj":"Sentence"},{"id":"TextSentencer_T10","span":{"begin":1607,"end":1748},"obj":"Sentence"},{"id":"TextSentencer_T11","span":{"begin":1749,"end":2181},"obj":"Sentence"}],"text":"Emerging 2019 Novel Coronavirus (2019-nCoV) Pneumonia.\nBackgroundThe chest CT findings of patients with 2019 Novel Coronavirus (2019-nCoV) pneumonia have not previously been described in detail.PurposeTo investigate the clinical, laboratory, and imaging findings of emerging 2019-nCoV pneumonia in humans.Materials and MethodsFifty-one patients (25 men and 26 women; age range 16-76 years) with laboratory-confirmed 2019-nCoV infection by using real-time reverse transcription polymerase chain reaction underwent thin-section CT. The imaging findings, clinical data, and laboratory data were evaluated.ResultsFifty of 51 patients (98%) had a history of contact with individuals from the endemic center in Wuhan, China. Fever (49 of 51, 96%) and cough (24 of 51, 47%) were the most common symptoms. Most patients had a normal white blood cell count (37 of 51, 73%), neutrophil count (44 of 51, 86%), and either normal (17 of 51, 35%) or reduced (33 of 51, 65%) lymphocyte count. CT images showed pure ground-glass opacity (GGO) in 39 of 51 (77%) patients and GGO with reticular and/or interlobular septal thickening in 38 of 51 (75%) patients. GGO with consolidation was present in 30 of 51 (59%) patients, and pure consolidation was present in 28 of 51 (55%) patients. Forty-four of 51 (86%) patients had bilateral lung involvement, while 41 of 51 (80%) involved the posterior part of the lungs and 44 of 51 (86%) were peripheral. There were more consolidated lung lesions in patients 5 days or more from disease onset to CT scan versus 4 days or fewer (431 of 712 lesions vs 129 of 612 lesions; P \u003c .001). Patients older than 50 years had more consolidated lung lesions than did those aged 50 years or younger (212 of 470 vs 198 of 854; P \u003c .001). Follow-up CT in 13 patients showed improvement in seven (54%) patients and progression in four (31%) patients.ConclusionPatients with fever and/or cough and with conspicuous ground-glass opacity lesions in the peripheral and posterior lungs on CT images, combined with normal or decreased white blood cells and a history of epidemic exposure, are highly suspected of having 2019 Novel Coronavirus (2019-nCoV) pneumonia.© RSNA, 2020."}
LitCovid-PD-MONDO-v1
{"project":"LitCovid-PD-MONDO-v1","denotations":[{"id":"T1","span":{"begin":44,"end":53},"obj":"Disease"},{"id":"T2","span":{"begin":139,"end":148},"obj":"Disease"},{"id":"T3","span":{"begin":285,"end":294},"obj":"Disease"},{"id":"T4","span":{"begin":416,"end":435},"obj":"Disease"},{"id":"T5","span":{"begin":426,"end":435},"obj":"Disease"},{"id":"T6","span":{"begin":2028,"end":2055},"obj":"Disease"},{"id":"T7","span":{"begin":2158,"end":2167},"obj":"Disease"}],"attributes":[{"id":"A1","pred":"mondo_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/MONDO_0005249"},{"id":"A2","pred":"mondo_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/MONDO_0005249"},{"id":"A3","pred":"mondo_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/MONDO_0005249"},{"id":"A4","pred":"mondo_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A5","pred":"mondo_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"id":"A6","pred":"mondo_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/MONDO_0003785"},{"id":"A7","pred":"mondo_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/MONDO_0005249"}],"text":"Emerging 2019 Novel Coronavirus (2019-nCoV) Pneumonia.\nBackgroundThe chest CT findings of patients with 2019 Novel Coronavirus (2019-nCoV) pneumonia have not previously been described in detail.PurposeTo investigate the clinical, laboratory, and imaging findings of emerging 2019-nCoV pneumonia in humans.Materials and MethodsFifty-one patients (25 men and 26 women; age range 16-76 years) with laboratory-confirmed 2019-nCoV infection by using real-time reverse transcription polymerase chain reaction underwent thin-section CT. The imaging findings, clinical data, and laboratory data were evaluated.ResultsFifty of 51 patients (98%) had a history of contact with individuals from the endemic center in Wuhan, China. Fever (49 of 51, 96%) and cough (24 of 51, 47%) were the most common symptoms. Most patients had a normal white blood cell count (37 of 51, 73%), neutrophil count (44 of 51, 86%), and either normal (17 of 51, 35%) or reduced (33 of 51, 65%) lymphocyte count. CT images showed pure ground-glass opacity (GGO) in 39 of 51 (77%) patients and GGO with reticular and/or interlobular septal thickening in 38 of 51 (75%) patients. GGO with consolidation was present in 30 of 51 (59%) patients, and pure consolidation was present in 28 of 51 (55%) patients. Forty-four of 51 (86%) patients had bilateral lung involvement, while 41 of 51 (80%) involved the posterior part of the lungs and 44 of 51 (86%) were peripheral. There were more consolidated lung lesions in patients 5 days or more from disease onset to CT scan versus 4 days or fewer (431 of 712 lesions vs 129 of 612 lesions; P \u003c .001). Patients older than 50 years had more consolidated lung lesions than did those aged 50 years or younger (212 of 470 vs 198 of 854; P \u003c .001). Follow-up CT in 13 patients showed improvement in seven (54%) patients and progression in four (31%) patients.ConclusionPatients with fever and/or cough and with conspicuous ground-glass opacity lesions in the peripheral and posterior lungs on CT images, combined with normal or decreased white blood cells and a history of epidemic exposure, are highly suspected of having 2019 Novel Coronavirus (2019-nCoV) pneumonia.© RSNA, 2020."}
LitCovid-PD-HP-v1
{"project":"LitCovid-PD-HP-v1","denotations":[{"id":"T1","span":{"begin":44,"end":53},"obj":"Phenotype"},{"id":"T2","span":{"begin":139,"end":148},"obj":"Phenotype"},{"id":"T3","span":{"begin":285,"end":294},"obj":"Phenotype"},{"id":"T4","span":{"begin":719,"end":724},"obj":"Phenotype"},{"id":"T5","span":{"begin":745,"end":750},"obj":"Phenotype"},{"id":"T6","span":{"begin":1883,"end":1888},"obj":"Phenotype"},{"id":"T7","span":{"begin":1896,"end":1901},"obj":"Phenotype"},{"id":"T8","span":{"begin":2158,"end":2167},"obj":"Phenotype"}],"attributes":[{"id":"A8","pred":"hp_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/HP_0002090"},{"id":"A7","pred":"hp_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/HP_0012735"},{"id":"A3","pred":"hp_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/HP_0002090"},{"id":"A2","pred":"hp_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/HP_0002090"},{"id":"A6","pred":"hp_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/HP_0001945"},{"id":"A1","pred":"hp_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/HP_0002090"},{"id":"A5","pred":"hp_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/HP_0012735"},{"id":"A4","pred":"hp_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/HP_0001945"}],"text":"Emerging 2019 Novel Coronavirus (2019-nCoV) Pneumonia.\nBackgroundThe chest CT findings of patients with 2019 Novel Coronavirus (2019-nCoV) pneumonia have not previously been described in detail.PurposeTo investigate the clinical, laboratory, and imaging findings of emerging 2019-nCoV pneumonia in humans.Materials and MethodsFifty-one patients (25 men and 26 women; age range 16-76 years) with laboratory-confirmed 2019-nCoV infection by using real-time reverse transcription polymerase chain reaction underwent thin-section CT. The imaging findings, clinical data, and laboratory data were evaluated.ResultsFifty of 51 patients (98%) had a history of contact with individuals from the endemic center in Wuhan, China. Fever (49 of 51, 96%) and cough (24 of 51, 47%) were the most common symptoms. Most patients had a normal white blood cell count (37 of 51, 73%), neutrophil count (44 of 51, 86%), and either normal (17 of 51, 35%) or reduced (33 of 51, 65%) lymphocyte count. CT images showed pure ground-glass opacity (GGO) in 39 of 51 (77%) patients and GGO with reticular and/or interlobular septal thickening in 38 of 51 (75%) patients. GGO with consolidation was present in 30 of 51 (59%) patients, and pure consolidation was present in 28 of 51 (55%) patients. Forty-four of 51 (86%) patients had bilateral lung involvement, while 41 of 51 (80%) involved the posterior part of the lungs and 44 of 51 (86%) were peripheral. There were more consolidated lung lesions in patients 5 days or more from disease onset to CT scan versus 4 days or fewer (431 of 712 lesions vs 129 of 612 lesions; P \u003c .001). Patients older than 50 years had more consolidated lung lesions than did those aged 50 years or younger (212 of 470 vs 198 of 854; P \u003c .001). Follow-up CT in 13 patients showed improvement in seven (54%) patients and progression in four (31%) patients.ConclusionPatients with fever and/or cough and with conspicuous ground-glass opacity lesions in the peripheral and posterior lungs on CT images, combined with normal or decreased white blood cells and a history of epidemic exposure, are highly suspected of having 2019 Novel Coronavirus (2019-nCoV) pneumonia.© RSNA, 2020."}
LitCovid-PD-FMA-UBERON-v1
{"project":"LitCovid-PD-FMA-UBERON-v1","denotations":[{"id":"T55470","span":{"begin":831,"end":836},"obj":"Body_part"},{"id":"T89013","span":{"begin":2044,"end":2049},"obj":"Body_part"},{"id":"T1","span":{"begin":69,"end":74},"obj":"Body_part"},{"id":"T2","span":{"begin":825,"end":841},"obj":"Body_part"},{"id":"T3","span":{"begin":837,"end":841},"obj":"Body_part"},{"id":"T4","span":{"begin":865,"end":875},"obj":"Body_part"},{"id":"T5","span":{"begin":960,"end":970},"obj":"Body_part"},{"id":"T6","span":{"begin":1315,"end":1319},"obj":"Body_part"},{"id":"T7","span":{"begin":1389,"end":1394},"obj":"Body_part"},{"id":"T8","span":{"begin":1460,"end":1464},"obj":"Body_part"},{"id":"T9","span":{"begin":1658,"end":1662},"obj":"Body_part"},{"id":"T10","span":{"begin":1984,"end":1989},"obj":"Body_part"},{"id":"T11","span":{"begin":2038,"end":2055},"obj":"Body_part"},{"id":"T12","span":{"begin":2050,"end":2055},"obj":"Body_part"}],"attributes":[{"id":"A3","pred":"fma_id","subj":"T3","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A10","pred":"fma_id","subj":"T10","obj":"http://purl.org/sig/ont/fma/fma68877"},{"id":"A9","pred":"fma_id","subj":"T9","obj":"http://purl.org/sig/ont/fma/fma7195"},{"id":"A12456","pred":"uberon_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"A11","pred":"fma_id","subj":"T11","obj":"http://purl.org/sig/ont/fma/fma62852"},{"id":"A4","pred":"fma_id","subj":"T4","obj":"http://purl.org/sig/ont/fma/fma62860"},{"id":"A26114","pred":"uberon_id","subj":"T55470","obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"id":"A1","pred":"fma_id","subj":"T1","obj":"http://purl.org/sig/ont/fma/fma9576"},{"id":"A52951","pred":"uberon_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/UBERON_0001443"},{"id":"A7","pred":"fma_id","subj":"T7","obj":"http://purl.org/sig/ont/fma/fma68877"},{"id":"A7792","pred":"uberon_id","subj":"T89013","obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"id":"A12","pred":"fma_id","subj":"T12","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A8","pred":"fma_id","subj":"T8","obj":"http://purl.org/sig/ont/fma/fma7195"},{"id":"A90800","pred":"uberon_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"A2","pred":"fma_id","subj":"T2","obj":"http://purl.org/sig/ont/fma/fma62852"},{"id":"A6","pred":"fma_id","subj":"T6","obj":"http://purl.org/sig/ont/fma/fma7195"},{"id":"A71534","pred":"uberon_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"A5","pred":"fma_id","subj":"T5","obj":"http://purl.org/sig/ont/fma/fma62863"}],"text":"Emerging 2019 Novel Coronavirus (2019-nCoV) Pneumonia.\nBackgroundThe chest CT findings of patients with 2019 Novel Coronavirus (2019-nCoV) pneumonia have not previously been described in detail.PurposeTo investigate the clinical, laboratory, and imaging findings of emerging 2019-nCoV pneumonia in humans.Materials and MethodsFifty-one patients (25 men and 26 women; age range 16-76 years) with laboratory-confirmed 2019-nCoV infection by using real-time reverse transcription polymerase chain reaction underwent thin-section CT. The imaging findings, clinical data, and laboratory data were evaluated.ResultsFifty of 51 patients (98%) had a history of contact with individuals from the endemic center in Wuhan, China. Fever (49 of 51, 96%) and cough (24 of 51, 47%) were the most common symptoms. Most patients had a normal white blood cell count (37 of 51, 73%), neutrophil count (44 of 51, 86%), and either normal (17 of 51, 35%) or reduced (33 of 51, 65%) lymphocyte count. CT images showed pure ground-glass opacity (GGO) in 39 of 51 (77%) patients and GGO with reticular and/or interlobular septal thickening in 38 of 51 (75%) patients. GGO with consolidation was present in 30 of 51 (59%) patients, and pure consolidation was present in 28 of 51 (55%) patients. Forty-four of 51 (86%) patients had bilateral lung involvement, while 41 of 51 (80%) involved the posterior part of the lungs and 44 of 51 (86%) were peripheral. There were more consolidated lung lesions in patients 5 days or more from disease onset to CT scan versus 4 days or fewer (431 of 712 lesions vs 129 of 612 lesions; P \u003c .001). Patients older than 50 years had more consolidated lung lesions than did those aged 50 years or younger (212 of 470 vs 198 of 854; P \u003c .001). Follow-up CT in 13 patients showed improvement in seven (54%) patients and progression in four (31%) patients.ConclusionPatients with fever and/or cough and with conspicuous ground-glass opacity lesions in the peripheral and posterior lungs on CT images, combined with normal or decreased white blood cells and a history of epidemic exposure, are highly suspected of having 2019 Novel Coronavirus (2019-nCoV) pneumonia.© RSNA, 2020."}
LitCovid-TimeML
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2019 Novel Coronavirus (2019-nCoV) Pneumonia.\nBackgroundThe chest CT findings of patients with 2019 Novel Coronavirus (2019-nCoV) pneumonia have not previously been described in detail.PurposeTo investigate the clinical, laboratory, and imaging findings of emerging 2019-nCoV pneumonia in humans.Materials and MethodsFifty-one patients (25 men and 26 women; age range 16-76 years) with laboratory-confirmed 2019-nCoV infection by using real-time reverse transcription polymerase chain reaction underwent thin-section CT. The imaging findings, clinical data, and laboratory data were evaluated.ResultsFifty of 51 patients (98%) had a history of contact with individuals from the endemic center in Wuhan, China. Fever (49 of 51, 96%) and cough (24 of 51, 47%) were the most common symptoms. Most patients had a normal white blood cell count (37 of 51, 73%), neutrophil count (44 of 51, 86%), and either normal (17 of 51, 35%) or reduced (33 of 51, 65%) lymphocyte count. CT images showed pure ground-glass opacity (GGO) in 39 of 51 (77%) patients and GGO with reticular and/or interlobular septal thickening in 38 of 51 (75%) patients. GGO with consolidation was present in 30 of 51 (59%) patients, and pure consolidation was present in 28 of 51 (55%) patients. Forty-four of 51 (86%) patients had bilateral lung involvement, while 41 of 51 (80%) involved the posterior part of the lungs and 44 of 51 (86%) were peripheral. There were more consolidated lung lesions in patients 5 days or more from disease onset to CT scan versus 4 days or fewer (431 of 712 lesions vs 129 of 612 lesions; P \u003c .001). Patients older than 50 years had more consolidated lung lesions than did those aged 50 years or younger (212 of 470 vs 198 of 854; P \u003c .001). Follow-up CT in 13 patients showed improvement in seven (54%) patients and progression in four (31%) patients.ConclusionPatients with fever and/or cough and with conspicuous ground-glass opacity lesions in the peripheral and posterior lungs on CT images, combined with normal or decreased white blood cells and a history of epidemic exposure, are highly suspected of having 2019 Novel Coronavirus (2019-nCoV) pneumonia.© RSNA, 2020."}
MeasurableQuantitativeAnnotation
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age range 16-76 years) with laboratory-confirmed 2019-nCoV infection by using real-time reverse transcription polymerase chain reaction underwent thin-section CT. The imaging findings, clinical data, and laboratory data were evaluated.ResultsFifty of 51 patients (98%) had a history of contact with individuals from the endemic center in Wuhan, China. Fever (49 of 51, 96%) and cough (24 of 51, 47%) were the most common symptoms. Most patients had a normal white blood cell count (37 of 51, 73%), neutrophil count (44 of 51, 86%), and either normal (17 of 51, 35%) or reduced (33 of 51, 65%) lymphocyte count. CT images showed pure ground-glass opacity (GGO) in 39 of 51 (77%) patients and GGO with reticular and/or interlobular septal thickening in 38 of 51 (75%) patients. GGO with consolidation was present in 30 of 51 (59%) patients, and pure consolidation was present in 28 of 51 (55%) patients. Forty-four of 51 (86%) patients had bilateral lung involvement, while 41 of 51 (80%) involved the posterior part of the lungs and 44 of 51 (86%) were peripheral. There were more consolidated lung lesions in patients 5 days or more from disease onset to CT scan versus 4 days or fewer (431 of 712 lesions vs 129 of 612 lesions; P \u003c .001). Patients older than 50 years had more consolidated lung lesions than did those aged 50 years or younger (212 of 470 vs 198 of 854; P \u003c .001). Follow-up CT in 13 patients showed improvement in seven (54%) patients and progression in four (31%) patients.ConclusionPatients with fever and/or cough and with conspicuous ground-glass opacity lesions in the peripheral and posterior lungs on CT images, combined with normal or decreased white blood cells and a history of epidemic exposure, are highly suspected of having 2019 Novel Coronavirus (2019-nCoV) pneumonia.© RSNA, 2020."}