PubMed:32007627
Annnotations
LitCovid-PAS-Enju
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| EnjuParser_T0 | 0-5 | JJ | denotes | Novel |
| EnjuParser_T1 | 6-17 | NN | denotes | coronavirus |
| EnjuParser_T2 | 17-18 | -COLON- | denotes | : |
| EnjuParser_T3 | 19-23 | IN | denotes | From |
| EnjuParser_T4 | 24-33 | NN | denotes | discovery |
| EnjuParser_T5 | 34-36 | TO | denotes | to |
| EnjuParser_T6 | 37-45 | JJ | denotes | clinical |
| EnjuParser_T7 | 46-57 | NNS | denotes | diagnostics |
| EnjuParser_T8 | 59-60 | DT | denotes | A |
| EnjuParser_T9 | 61-66 | JJ | denotes | novel |
| EnjuParser_T10 | 67-78 | NN | denotes | coronavirus |
| EnjuParser_T11 | 79-89 | VBN | denotes | designated |
| EnjuParser_T12 | 90-92 | IN | denotes | as |
| EnjuParser_T13 | 93-102 | NN | denotes | 2019-nCoV |
| EnjuParser_T14 | 103-108 | RB | denotes | first |
| EnjuParser_T15 | 109-117 | VBD | denotes | appeared |
| EnjuParser_T16 | 118-120 | IN | denotes | in |
| EnjuParser_T17 | 121-126 | NNP | denotes | Wuhan |
| EnjuParser_T18 | 126-127 | -COMMA- | denotes | , |
| EnjuParser_T19 | 128-133 | NNP | denotes | China |
| EnjuParser_T20 | 134-136 | IN | denotes | in |
| EnjuParser_T21 | 137-141 | JJ | denotes | late |
| EnjuParser_T22 | 142-150 | NNP | denotes | December |
| EnjuParser_T23 | 151-155 | CD | denotes | 2019 |
| EnjuParser_T24 | 157-163 | NNS | denotes | Dozens |
| EnjuParser_T25 | 164-166 | IN | denotes | of |
| EnjuParser_T26 | 167-173 | NNS | denotes | people |
| EnjuParser_T27 | 174-178 | VBD | denotes | died |
| EnjuParser_T28 | 179-181 | IN | denotes | in |
| EnjuParser_T29 | 182-187 | NNP | denotes | China |
| EnjuParser_T30 | 187-188 | -COMMA- | denotes | , |
| EnjuParser_T31 | 189-192 | CC | denotes | and |
| EnjuParser_T32 | 193-202 | NNS | denotes | thousands |
| EnjuParser_T33 | 203-205 | IN | denotes | of |
| EnjuParser_T34 | 206-212 | NNS | denotes | people |
| EnjuParser_T35 | 213-221 | VBN | denotes | infected |
| EnjuParser_T36 | 222-224 | IN | denotes | as |
| EnjuParser_T37 | 225-234 | NN | denotes | 2019-nCoV |
| EnjuParser_T38 | 235-244 | VBZ | denotes | continues |
| EnjuParser_T39 | 245-247 | TO | denotes | to |
| EnjuParser_T40 | 248-254 | VB | denotes | spread |
| EnjuParser_T41 | 255-261 | IN | denotes | around |
| EnjuParser_T42 | 262-265 | DT | denotes | the |
| EnjuParser_T43 | 266-271 | NN | denotes | world |
| EnjuParser_T44 | 273-275 | PRP | denotes | We |
| EnjuParser_T45 | 276-280 | VBP | denotes | have |
| EnjuParser_T46 | 281-290 | VBN | denotes | described |
| EnjuParser_T47 | 291-294 | DT | denotes | the |
| EnjuParser_T48 | 295-304 | NN | denotes | discovery |
| EnjuParser_T49 | 304-305 | -COMMA- | denotes | , |
| EnjuParser_T50 | 306-315 | NN | denotes | emergence |
| EnjuParser_T51 | 315-316 | -COMMA- | denotes | , |
| EnjuParser_T52 | 317-324 | JJ | denotes | genomic |
| EnjuParser_T53 | 325-340 | NNS | denotes | characteristics |
| EnjuParser_T54 | 340-341 | -COMMA- | denotes | , |
| EnjuParser_T55 | 342-345 | CC | denotes | and |
| EnjuParser_T56 | 346-354 | JJ | denotes | clinical |
| EnjuParser_T57 | 355-366 | NNS | denotes | diagnostics |
| EnjuParser_T58 | 367-369 | IN | denotes | of |
| EnjuParser_T59 | 370-379 | NN | denotes | 2019-nCoV |
| EnjuParser_R0 | EnjuParser_T1 | EnjuParser_T0 | arg1Of | coronavirus,Novel |
| EnjuParser_R1 | EnjuParser_T1 | EnjuParser_T2 | arg1Of | coronavirus,: |
| EnjuParser_R2 | EnjuParser_T4 | EnjuParser_T3 | arg1Of | discovery,From |
| EnjuParser_R3 | EnjuParser_T4 | EnjuParser_T5 | arg1Of | discovery,to |
| EnjuParser_R4 | EnjuParser_T7 | EnjuParser_T5 | arg2Of | diagnostics,to |
| EnjuParser_R5 | EnjuParser_T7 | EnjuParser_T6 | arg1Of | diagnostics,clinical |
| EnjuParser_R6 | EnjuParser_T10 | EnjuParser_T8 | arg1Of | coronavirus,A |
| EnjuParser_R7 | EnjuParser_T10 | EnjuParser_T9 | arg1Of | coronavirus,novel |
| EnjuParser_R8 | EnjuParser_T10 | EnjuParser_T11 | arg2Of | coronavirus,designated |
| EnjuParser_R9 | EnjuParser_T11 | EnjuParser_T12 | arg1Of | designated,as |
| EnjuParser_R10 | EnjuParser_T13 | EnjuParser_T12 | arg2Of | 2019-nCoV,as |
| EnjuParser_R11 | EnjuParser_T15 | EnjuParser_T14 | arg1Of | appeared,first |
| EnjuParser_R12 | EnjuParser_T10 | EnjuParser_T15 | arg1Of | coronavirus,appeared |
| EnjuParser_R13 | EnjuParser_T15 | EnjuParser_T16 | arg1Of | appeared,in |
| EnjuParser_R14 | EnjuParser_T17 | EnjuParser_T16 | arg2Of | Wuhan,in |
| EnjuParser_R15 | EnjuParser_T17 | EnjuParser_T18 | arg1Of | Wuhan,"," |
| EnjuParser_R16 | EnjuParser_T19 | EnjuParser_T18 | arg2Of | China,"," |
| EnjuParser_R17 | EnjuParser_T15 | EnjuParser_T20 | arg1Of | appeared,in |
| EnjuParser_R18 | EnjuParser_T22 | EnjuParser_T20 | arg2Of | December,in |
| EnjuParser_R19 | EnjuParser_T22 | EnjuParser_T21 | arg1Of | December,late |
| EnjuParser_R20 | EnjuParser_T22 | EnjuParser_T23 | arg1Of | December,2019 |
| EnjuParser_R21 | EnjuParser_T24 | EnjuParser_T25 | arg1Of | Dozens,of |
| EnjuParser_R22 | EnjuParser_T26 | EnjuParser_T25 | arg2Of | people,of |
| EnjuParser_R23 | EnjuParser_T24 | EnjuParser_T27 | arg1Of | Dozens,died |
| EnjuParser_R24 | EnjuParser_T27 | EnjuParser_T28 | arg1Of | died,in |
| EnjuParser_R25 | EnjuParser_T29 | EnjuParser_T28 | arg2Of | China,in |
| EnjuParser_R26 | EnjuParser_T31 | EnjuParser_T30 | arg1Of | and,"," |
| EnjuParser_R27 | EnjuParser_T27 | EnjuParser_T31 | arg1Of | died,and |
| EnjuParser_R28 | EnjuParser_T38 | EnjuParser_T31 | arg2Of | continues,and |
| EnjuParser_R29 | EnjuParser_T32 | EnjuParser_T33 | arg1Of | thousands,of |
| EnjuParser_R30 | EnjuParser_T34 | EnjuParser_T33 | arg2Of | people,of |
| EnjuParser_R31 | EnjuParser_T34 | EnjuParser_T35 | arg2Of | people,infected |
| EnjuParser_R32 | EnjuParser_T35 | EnjuParser_T36 | arg1Of | infected,as |
| EnjuParser_R33 | EnjuParser_T37 | EnjuParser_T36 | arg2Of | 2019-nCoV,as |
| EnjuParser_R34 | EnjuParser_T32 | EnjuParser_T38 | arg1Of | thousands,continues |
| EnjuParser_R35 | EnjuParser_T40 | EnjuParser_T38 | arg2Of | spread,continues |
| EnjuParser_R36 | EnjuParser_T40 | EnjuParser_T39 | arg1Of | spread,to |
| EnjuParser_R37 | EnjuParser_T32 | EnjuParser_T40 | arg1Of | thousands,spread |
| EnjuParser_R38 | EnjuParser_T40 | EnjuParser_T41 | arg1Of | spread,around |
| EnjuParser_R39 | EnjuParser_T43 | EnjuParser_T41 | arg2Of | world,around |
| EnjuParser_R40 | EnjuParser_T43 | EnjuParser_T42 | arg1Of | world,the |
| EnjuParser_R41 | EnjuParser_T44 | EnjuParser_T45 | arg1Of | We,have |
| EnjuParser_R42 | EnjuParser_T46 | EnjuParser_T45 | arg2Of | described,have |
| EnjuParser_R43 | EnjuParser_T44 | EnjuParser_T46 | arg1Of | We,described |
| EnjuParser_R44 | EnjuParser_T55 | EnjuParser_T46 | arg2Of | and,described |
| EnjuParser_R45 | EnjuParser_T48 | EnjuParser_T47 | arg1Of | discovery,the |
| EnjuParser_R46 | EnjuParser_T48 | EnjuParser_T49 | arg1Of | discovery,"," |
| EnjuParser_R47 | EnjuParser_T50 | EnjuParser_T49 | arg2Of | emergence,"," |
| EnjuParser_R48 | EnjuParser_T48 | EnjuParser_T51 | arg1Of | discovery,"," |
| EnjuParser_R49 | EnjuParser_T53 | EnjuParser_T51 | arg2Of | characteristics,"," |
| EnjuParser_R50 | EnjuParser_T53 | EnjuParser_T52 | arg1Of | characteristics,genomic |
| EnjuParser_R51 | EnjuParser_T55 | EnjuParser_T54 | arg1Of | and,"," |
| EnjuParser_R52 | EnjuParser_T51 | EnjuParser_T55 | arg1Of | ",",and |
| EnjuParser_R53 | EnjuParser_T57 | EnjuParser_T55 | arg2Of | diagnostics,and |
| EnjuParser_R54 | EnjuParser_T57 | EnjuParser_T56 | arg1Of | diagnostics,clinical |
| EnjuParser_R55 | EnjuParser_T57 | EnjuParser_T58 | arg1Of | diagnostics,of |
| EnjuParser_R56 | EnjuParser_T59 | EnjuParser_T58 | arg2Of | 2019-nCoV,of |
LitCovid-ArguminSci
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-58 | DRI_Background | denotes | Novel coronavirus: From discovery to clinical diagnostics. |
| T2 | 59-156 | DRI_Background | denotes | A novel coronavirus designated as 2019-nCoV first appeared in Wuhan, China in late December 2019. |
| T3 | 157-272 | DRI_Background | denotes | Dozens of people died in China, and thousands of people infected as 2019-nCoV continues to spread around the world. |
| T4 | 273-380 | DRI_Approach | denotes | We have described the discovery, emergence, genomic characteristics, and clinical diagnostics of 2019-nCoV. |
LitCovid-OGER
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 317-324 | SO:0001026 | denotes | genomic |
LitCovid-PubTatorCentral
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 167-173 | Species:9606 | denotes | people |
| T2 | 206-212 | Species:9606 | denotes | people |
LitCovid-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 6-17 | NCBITaxon:11118 | denotes | coronavirus |
| T2 | 67-78 | NCBITaxon:11118 | denotes | coronavirus |
| T3 | 93-102 | SP_7 | denotes | 2019-nCoV |
| T4 | 167-173 | NCBITaxon:9606 | denotes | people |
| T5 | 174-178 | GO:0016265 | denotes | died |
| T6 | 206-212 | NCBITaxon:9606 | denotes | people |
| T7 | 225-234 | SP_7 | denotes | 2019-nCoV |
| T8 | 317-324 | SO:0001026 | denotes | genomic |
| T9 | 370-379 | SP_7 | denotes | 2019-nCoV |
LitCovid-sentences-v1
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| TextSentencer_T1 | 0-18 | Sentence | denotes | Novel coronavirus: |
| TextSentencer_T2 | 19-58 | Sentence | denotes | From discovery to clinical diagnostics. |
| TextSentencer_T3 | 59-156 | Sentence | denotes | A novel coronavirus designated as 2019-nCoV first appeared in Wuhan, China in late December 2019. |
| TextSentencer_T4 | 157-272 | Sentence | denotes | Dozens of people died in China, and thousands of people infected as 2019-nCoV continues to spread around the world. |
| TextSentencer_T5 | 273-380 | Sentence | denotes | We have described the discovery, emergence, genomic characteristics, and clinical diagnostics of 2019-nCoV. |
LitCovid-TimeML
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| tok1 | 0-5 | NNP | denotes | Novel |
| tok2 | 6-17 | JJ | denotes | coronavirus |
| tok3 | 17-18 | : | denotes | : |
| tok4 | 19-23 | IN | denotes | From |
| tok5 | 24-33 | NN | denotes | discovery |
| tok6 | 34-36 | TO | denotes | to |
| tok7 | 37-45 | JJ | denotes | clinical |
| tok8 | 46-57 | NNS | denotes | diagnostics |
| tok9 | 57-58 | . | denotes | . |
| tok10 | 59-60 | DT | denotes | A |
| tok11 | 61-66 | NN | denotes | novel |
| tok12 | 67-78 | JJ | denotes | coronavirus |
| tok13 | 79-89 | VBN | denotes | designated |
| tok14 | 90-92 | IN | denotes | as |
| tok15 | 93-97 | CD | denotes | 2019 |
| tok16 | 97-98 | : | denotes | - |
| tok17 | 98-102 | NN | denotes | nCoV |
| tok18 | 103-108 | RB | denotes | first |
| tok19 | 109-117 | VBD | denotes | appeared |
| tok20 | 118-120 | IN | denotes | in |
| tok21 | 121-126 | NNP | denotes | Wuhan |
| tok22 | 126-127 | , | denotes | , |
| tok23 | 128-133 | NNP | denotes | China |
| tok24 | 134-136 | IN | denotes | in |
| tok25 | 137-141 | JJ | denotes | late |
| tok26 | 142-150 | NNP | denotes | December |
| tok27 | 151-155 | CD | denotes | 2019 |
| tok28 | 155-156 | . | denotes | . |
| tok29 | 157-163 | NNS | denotes | Dozens |
| tok30 | 164-166 | IN | denotes | of |
| tok31 | 167-173 | NNS | denotes | people |
| tok32 | 174-178 | VBD | denotes | died |
| tok33 | 179-181 | IN | denotes | in |
| tok34 | 182-187 | NNP | denotes | China |
| tok35 | 187-188 | , | denotes | , |
| tok36 | 189-192 | CC | denotes | and |
| tok37 | 193-202 | NNS | denotes | thousands |
| tok38 | 203-205 | IN | denotes | of |
| tok39 | 206-212 | NNS | denotes | people |
| tok40 | 213-221 | VBN | denotes | infected |
| tok41 | 222-224 | IN | denotes | as |
| tok42 | 225-229 | CD | denotes | 2019 |
| tok43 | 229-230 | : | denotes | - |
| tok44 | 230-234 | NN | denotes | nCoV |
| tok45 | 235-244 | VBZ | denotes | continues |
| tok46 | 245-247 | TO | denotes | to |
| tok47 | 248-254 | VB | denotes | spread |
| tok48 | 255-261 | IN | denotes | around |
| tok49 | 262-265 | DT | denotes | the |
| tok50 | 266-271 | NN | denotes | world |
| tok51 | 271-272 | . | denotes | . |
| tok52 | 273-275 | PRP | denotes | We |
| tok53 | 276-280 | VBP | denotes | have |
| tok54 | 281-290 | VBN | denotes | described |
| tok55 | 291-294 | DT | denotes | the |
| tok56 | 295-304 | NN | denotes | discovery |
| tok57 | 304-305 | , | denotes | , |
| tok58 | 306-315 | NN | denotes | emergence |
| tok59 | 315-316 | , | denotes | , |
| tok60 | 317-324 | JJ | denotes | genomic |
| tok61 | 325-340 | NNS | denotes | characteristics |
| tok62 | 340-341 | , | denotes | , |
| tok63 | 342-345 | CC | denotes | and |
| tok64 | 346-354 | JJ | denotes | clinical |
| tok65 | 355-366 | NNS | denotes | diagnostics |
| tok66 | 367-369 | IN | denotes | of |
| tok67 | 370-374 | CD | denotes | 2019 |
| tok68 | 374-375 | : | denotes | - |
| tok69 | 375-379 | NN | denotes | nCoV |
| tok70 | 379-380 | . | denotes | . |
| lookup1 | 19-23 | stop | denotes | From |
| lookup2 | 34-36 | country_code | denotes | to |
| lookup3 | 90-92 | country_code | denotes | as |
| lookup4 | 93-97 | year | denotes | 2019 |
| lookup5 | 103-108 | date | denotes | first |
| lookup6 | 118-120 | country_code | denotes | in |
| lookup7 | 121-126 | location | denotes | Wuhan |
| lookup8 | 128-133 | location | denotes | China |
| lookup9 | 134-136 | country_code | denotes | in |
| lookup10 | 142-150 | date | denotes | December |
| lookup11 | 151-155 | year | denotes | 2019 |
| lookup12 | 179-181 | country_code | denotes | in |
| lookup13 | 182-187 | location | denotes | China |
| lookup14 | 222-224 | country_code | denotes | as |
| lookup15 | 225-229 | year | denotes | 2019 |
| lookup16 | 245-247 | country_code | denotes | to |
| lookup17 | 273-275 | stop | denotes | We |
| lookup18 | 370-374 | year | denotes | 2019 |
| event1 | 79-89 | OCCURRENCE | denotes | designated |
| event2 | 109-117 | OCCURRENCE | denotes | appeared |
| event3 | 281-290 | OCCURRENCE | denotes | described |
| event4 | 248-254 | OCCURRENCE | denotes | spread |
| event5 | 213-221 | OCCURRENCE | denotes | infected |
| event6 | 174-178 | OCCURRENCE | denotes | died |
| event7 | 235-244 | ASPECTUAL | denotes | continues |