PubMed:31541154
Annnotations
Glycan-GlyCosmos
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 944-954 | Glycan | denotes | xyloglucan | https://api.glycosmos.org/wurcs2image/latest/png/binary/G25326UC |
| T2 | 956-967 | Glycan | denotes | glucomannan | https://api.glycosmos.org/wurcs2image/latest/png/binary/G88924MD |
| T3 | 972-985 | Glycan | denotes | galactomannan | https://api.glycosmos.org/wurcs2image/latest/png/binary/G93424OB |
| T4 | 1172-1182 | Glycan | denotes | cellobiose | https://api.glycosmos.org/wurcs2image/latest/png/binary/G55560AP |
| T5 | 1187-1198 | Glycan | denotes | cellotriose | https://api.glycosmos.org/wurcs2image/latest/png/binary/G50026IZ |
GlyCosmos-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 944-954 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | xyloglucan | http://www.glycoepitope.jp/epitopes/EP0511 |
| T2 | 956-967 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | glucomannan | http://www.glycoepitope.jp/epitopes/EP0509 |
| T3 | 972-985 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | galactomannan | http://www.glycoepitope.jp/epitopes/EP0510 |
GlyCosmos15-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 90-93 | Body_part | denotes | gut | http://purl.obolibrary.org/obo/UBERON_0001007|http://purl.obolibrary.org/obo/UBERON_0001555|http://purl.obolibrary.org/obo/UBERON_0004907 |
| T4 | 556-559 | Body_part | denotes | gut | http://purl.obolibrary.org/obo/UBERON_0001007|http://purl.obolibrary.org/obo/UBERON_0001555|http://purl.obolibrary.org/obo/UBERON_0004907 |
| T7 | 1451-1454 | Body_part | denotes | gut | http://purl.obolibrary.org/obo/UBERON_0001007|http://purl.obolibrary.org/obo/UBERON_0001555|http://purl.obolibrary.org/obo/UBERON_0004907 |
GlyCosmos15-Sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-105 | Sentence | denotes | A processive endoglucanase with multi-substrate specificity is characterized from porcine gut microbiota. |
| T2 | 106-220 | Sentence | denotes | Cellulases play important roles in the dietary fibre digestion in pigs, and have multiple industrial applications. |
| T3 | 221-309 | Sentence | denotes | The porcine intestinal microbiota display a unique feature in rapid cellulose digestion. |
| T4 | 310-632 | Sentence | denotes | Herein, we have expressed a cellulase gene, p4818Cel5_2A, which singly encoded a catalytic domain belonging to glycoside hydrolase family 5 subfamily 2, and was previously identified from a metagenomic expression library constructed from porcine gut microbiome after feeding grower pigs with a cellulose-supplemented diet. |
| T5 | 633-749 | Sentence | denotes | The activity of purified p4818Cel5_2A was maximal at pH 6.0 and 50 °C and displayed resistance to trypsin digestion. |
| T6 | 750-986 | Sentence | denotes | This enzyme exhibited activities towards a wide variety of plant polysaccharides, including cellulosic substrates of avicel and solka-Floc®, and the hemicelluloses of β-(1 → 4)/(1 → 3)-glucans, xyloglucan, glucomannan and galactomannan. |
| T7 | 987-1227 | Sentence | denotes | Viscosity, reducing sugar distribution and hydrolysis product analyses further revealed that this enzyme was a processive endo-β-(1 → 4)-glucanase capable of hydrolyzing cellulose into cellobiose and cellotriose as the primary end products. |
| T8 | 1228-1344 | Sentence | denotes | These catalytic features of p4818Cel5_2A were further explored in the context of a three-dimensional homology model. |
| T9 | 1345-1566 | Sentence | denotes | Altogether, results of this study report a microbial processive endoglucanase identified from the porcine gut microbiome, and it may be tailored as an efficient biocatalyst candidate for potential industrial applications. |
GlyCosmos15-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 944-954 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | xyloglucan | http://www.glycoepitope.jp/epitopes/EP0511 |
| T2 | 956-967 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | glucomannan | http://www.glycoepitope.jp/epitopes/EP0509 |
| T3 | 972-985 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | galactomannan | http://www.glycoepitope.jp/epitopes/EP0510 |
GlyCosmos15-Lectin-Jamboree
| Id | Subject | Object | Predicate | Lexical cue | glycosmos_id |
|---|---|---|---|---|---|
| T1 | 13-26 | Lectin | denotes | endoglucanase | GL_002899 |
| T2 | 1409-1422 | Lectin | denotes | endoglucanase | GL_002899 |
GlyCosmos15-NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 94-104 | OrganismTaxon | denotes | microbiota | 13613 |
| T2 | 172-176 | OrganismTaxon | denotes | pigs | 9823 |
| T3 | 244-254 | OrganismTaxon | denotes | microbiota | 13613 |
| T4 | 592-596 | OrganismTaxon | denotes | pigs | 9823 |
GlyCosmos15-FMA
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 90-93 | Body_part | denotes | gut | FMA:7199 |
| T2 | 233-243 | Body_part | denotes | intestinal | FMA:7199 |
| T3 | 556-559 | Body_part | denotes | gut | FMA:7199 |
| T4 | 1451-1454 | Body_part | denotes | gut | FMA:7199 |
GlyCosmos15-MAT
| Id | Subject | Object | Predicate | Lexical cue | mat_id |
|---|---|---|---|---|---|
| T1 | 90-93 | Body_part | denotes | gut | http://purl.obolibrary.org/obo/MAT_0000043 |
| T2 | 233-243 | Body_part | denotes | intestinal | http://purl.obolibrary.org/obo/MAT_0000043 |
| T3 | 556-559 | Body_part | denotes | gut | http://purl.obolibrary.org/obo/MAT_0000043 |
| T4 | 1451-1454 | Body_part | denotes | gut | http://purl.obolibrary.org/obo/MAT_0000043 |
GlyCosmos15-Glycan
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 944-954 | Glycan | denotes | xyloglucan | https://api.glycosmos.org/wurcs2image/latest/png/binary/G25326UC |
| T2 | 956-967 | Glycan | denotes | glucomannan | https://api.glycosmos.org/wurcs2image/latest/png/binary/G88924MD |
| T3 | 972-985 | Glycan | denotes | galactomannan | https://api.glycosmos.org/wurcs2image/latest/png/binary/G93424OB |
| T4 | 1172-1182 | Glycan | denotes | cellobiose | https://api.glycosmos.org/wurcs2image/latest/png/binary/G55560AP |
| T5 | 1187-1198 | Glycan | denotes | cellotriose | https://api.glycosmos.org/wurcs2image/latest/png/binary/G50026IZ |
NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 94-104 | OrganismTaxon | denotes | microbiota | 13613 |
| T2 | 172-176 | OrganismTaxon | denotes | pigs | 9823 |
| T3 | 244-254 | OrganismTaxon | denotes | microbiota | 13613 |
| T4 | 592-596 | OrganismTaxon | denotes | pigs | 9823 |
Anatomy-MAT
| Id | Subject | Object | Predicate | Lexical cue | mat_id |
|---|---|---|---|---|---|
| T1 | 90-93 | Body_part | denotes | gut | http://purl.obolibrary.org/obo/MAT_0000043 |
| T2 | 233-243 | Body_part | denotes | intestinal | http://purl.obolibrary.org/obo/MAT_0000043 |
| T3 | 556-559 | Body_part | denotes | gut | http://purl.obolibrary.org/obo/MAT_0000043 |
| T4 | 1451-1454 | Body_part | denotes | gut | http://purl.obolibrary.org/obo/MAT_0000043 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 90-93 | Body_part | denotes | gut | http://purl.obolibrary.org/obo/UBERON_0001007|http://purl.obolibrary.org/obo/UBERON_0001555|http://purl.obolibrary.org/obo/UBERON_0004907 |
| T4 | 556-559 | Body_part | denotes | gut | http://purl.obolibrary.org/obo/UBERON_0001007|http://purl.obolibrary.org/obo/UBERON_0001555|http://purl.obolibrary.org/obo/UBERON_0004907 |
| T7 | 1451-1454 | Body_part | denotes | gut | http://purl.obolibrary.org/obo/UBERON_0001007|http://purl.obolibrary.org/obo/UBERON_0001555|http://purl.obolibrary.org/obo/UBERON_0004907 |