PubMed:31144988
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/31144988","sourcedb":"PubMed","sourceid":"31144988","source_url":"https://www.ncbi.nlm.nih.gov/pubmed/31144988","text":"lncRNA-CYTOR Works as an Oncogene Through the CYTOR/miR-3679-5p/MACC1 Axis in Colorectal Cancer.\nPieces of evidence have shown that cytoskeleton regulator RNA (CYTOR), a long noncoding RNA (lncRNA), played a pivotal role in development and progression of a variety of cancers. In contrast, further research is needed to study the clinical significance and the detailed mechanism of action of lncRNA-CYTOR in colorectal cancer (CRC). This study aimed to investigate the clinical significance of CYTOR in CRC prognosis and identify the relevant potential signaling pathways and underlying mechanism of competing endogenous RNA. Reverse transcription-quantitative polymerase chain reaction (RT-qPCR) indicated that the expression of CYTOR was significantly elevated in CRC tumor tissues and cell lines. Aberrant expression of CYTOR was significantly related to TNM stage, T stage, N stage, and perineural and venous invasions. Survival analysis indicated that high-CYTOR expression was associated with poor overall survival in CRC patients (p = 0.0057), and multivariate analysis showed that high-CYTOR expression was an independent prognostic factor, which led to poor OS. In addition, bioinformatics analysis revealed that there were 18 microRNAs (miRNAs) interacted with CYTOR, and one of them, miR-3679-5p might collaborate with metastasis-associated in colon cancer-1 (MACC1), which was selected for further analysis. Pearson correlation analysis showed a significant positive correlation between the expression levels of CYTOR and MACC1. In conclusion, this study suggested that lncRNA-CYTOR played an important role in tumorigenesis and development through the CYTOR/miR-3679-5p/MACC1 axis.","tracks":[{"project":"PubMed_ArguminSci","denotations":[{"id":"T1","span":{"begin":117,"end":276},"obj":"DRI_Challenge"},{"id":"T2","span":{"begin":277,"end":432},"obj":"DRI_Background"},{"id":"T3","span":{"begin":433,"end":625},"obj":"DRI_Challenge"},{"id":"T4","span":{"begin":626,"end":799},"obj":"DRI_Background"},{"id":"T5","span":{"begin":924,"end":1170},"obj":"DRI_Outcome"},{"id":"T6","span":{"begin":1541,"end":1694},"obj":"DRI_Challenge"}],"attributes":[{"subj":"T1","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T2","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T3","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T4","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T5","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T6","pred":"source","obj":"PubMed_ArguminSci"}]},{"project":"GoldHamster","denotations":[{"id":"T1","span":{"begin":0,"end":6},"obj":"D062085"},{"id":"T2","span":{"begin":52,"end":55},"obj":"PR:000010459"},{"id":"T3","span":{"begin":52,"end":55},"obj":"PR:Q9HAP2"},{"id":"T4","span":{"begin":52,"end":55},"obj":"PR:Q9DBD2"},{"id":"T5","span":{"begin":52,"end":55},"obj":"P13087"},{"id":"T6","span":{"begin":52,"end":55},"obj":"D3ZDI6"},{"id":"T7","span":{"begin":52,"end":55},"obj":"Q93105"},{"id":"T8","span":{"begin":52,"end":55},"obj":"PR:Q5T0T0"},{"id":"T9","span":{"begin":52,"end":55},"obj":"Q8BM54"},{"id":"T10","span":{"begin":52,"end":55},"obj":"Q8WY64"},{"id":"T11","span":{"begin":52,"end":55},"obj":"PR:000010844"},{"id":"T12","span":{"begin":52,"end":55},"obj":"PR:Q2VPU4"},{"id":"T13","span":{"begin":52,"end":55},"obj":"PR:000010182"},{"id":"T14","span":{"begin":52,"end":55},"obj":"PR:Q6TEM9"},{"id":"T15","span":{"begin":64,"end":69},"obj":"PR:Q6ZN28"},{"id":"T16","span":{"begin":64,"end":69},"obj":"PR:000010036"},{"id":"T17","span":{"begin":78,"end":95},"obj":"D015179"},{"id":"T18","span":{"begin":78,"end":95},"obj":"D015179"},{"id":"T21","span":{"begin":89,"end":95},"obj":"CVCL_E025"},{"id":"T22","span":{"begin":132,"end":144},"obj":"GO:0005856"},{"id":"T26","span":{"begin":155,"end":158},"obj":"SO:0000356"},{"id":"T23","span":{"begin":155,"end":158},"obj":"CHEBI:33697"},{"id":"T24","span":{"begin":155,"end":158},"obj":"D012313"},{"id":"T25","span":{"begin":155,"end":158},"obj":"GO:0005562"},{"id":"T27","span":{"begin":170,"end":188},"obj":"D062085"},{"id":"T28","span":{"begin":175,"end":188},"obj":"SO:0000655"},{"id":"T32","span":{"begin":185,"end":188},"obj":"GO:0005562"},{"id":"T34","span":{"begin":190,"end":196},"obj":"D062085"},{"id":"T35","span":{"begin":268,"end":275},"obj":"D009369"},{"id":"T36","span":{"begin":268,"end":275},"obj":"D009369"},{"id":"T37","span":{"begin":392,"end":398},"obj":"D062085"},{"id":"T38","span":{"begin":408,"end":425},"obj":"D015179"},{"id":"T39","span":{"begin":408,"end":425},"obj":"D015179"},{"id":"T40","span":{"begin":427,"end":430},"obj":"PR:Q8L925"},{"id":"T42","span":{"begin":427,"end":430},"obj":"PR:Q96318"},{"id":"T43","span":{"begin":427,"end":430},"obj":"PR:P29413"},{"id":"T44","span":{"begin":427,"end":430},"obj":"Q719L8"},{"id":"T41","span":{"begin":427,"end":430},"obj":"D015179"},{"id":"T45","span":{"begin":503,"end":506},"obj":"PR:Q8L925"},{"id":"T47","span":{"begin":503,"end":506},"obj":"PR:Q96318"},{"id":"T48","span":{"begin":503,"end":506},"obj":"PR:P29413"},{"id":"T49","span":{"begin":503,"end":506},"obj":"Q719L8"},{"id":"T46","span":{"begin":503,"end":506},"obj":"D015179"},{"id":"T50","span":{"begin":553,"end":562},"obj":"GO:0023052"},{"id":"T54","span":{"begin":621,"end":624},"obj":"SO:0000356"},{"id":"T51","span":{"begin":621,"end":624},"obj":"CHEBI:33697"},{"id":"T52","span":{"begin":621,"end":624},"obj":"D012313"},{"id":"T53","span":{"begin":621,"end":624},"obj":"GO:0005562"},{"id":"T55","span":{"begin":626,"end":633},"obj":"SO:0001031"},{"id":"T56","span":{"begin":626,"end":647},"obj":"GO:0001171"},{"id":"T58","span":{"begin":672,"end":677},"obj":"SO:0000419"},{"id":"T59","span":{"begin":672,"end":686},"obj":"MOP:0000635"},{"id":"T60","span":{"begin":766,"end":769},"obj":"PR:Q8L925"},{"id":"T62","span":{"begin":766,"end":769},"obj":"PR:Q96318"},{"id":"T63","span":{"begin":766,"end":769},"obj":"PR:P29413"},{"id":"T64","span":{"begin":766,"end":769},"obj":"Q719L8"},{"id":"T61","span":{"begin":766,"end":769},"obj":"D015179"},{"id":"T65","span":{"begin":770,"end":775},"obj":"D009369"},{"id":"T66","span":{"begin":770,"end":775},"obj":"D009369"},{"id":"T67","span":{"begin":1024,"end":1027},"obj":"PR:Q8L925"},{"id":"T69","span":{"begin":1024,"end":1027},"obj":"PR:Q96318"},{"id":"T70","span":{"begin":1024,"end":1027},"obj":"PR:P29413"},{"id":"T71","span":{"begin":1024,"end":1027},"obj":"Q719L8"},{"id":"T68","span":{"begin":1024,"end":1027},"obj":"D015179"},{"id":"T72","span":{"begin":1236,"end":1245},"obj":"D035683"},{"id":"T73","span":{"begin":1247,"end":1253},"obj":"D035683"},{"id":"T74","span":{"begin":1295,"end":1298},"obj":"PR:000010459"},{"id":"T75","span":{"begin":1295,"end":1298},"obj":"PR:Q9HAP2"},{"id":"T76","span":{"begin":1295,"end":1298},"obj":"PR:Q9DBD2"},{"id":"T77","span":{"begin":1295,"end":1298},"obj":"P13087"},{"id":"T78","span":{"begin":1295,"end":1298},"obj":"D3ZDI6"},{"id":"T79","span":{"begin":1295,"end":1298},"obj":"Q93105"},{"id":"T80","span":{"begin":1295,"end":1298},"obj":"PR:Q5T0T0"},{"id":"T81","span":{"begin":1295,"end":1298},"obj":"Q8BM54"},{"id":"T82","span":{"begin":1295,"end":1298},"obj":"Q8WY64"},{"id":"T83","span":{"begin":1295,"end":1298},"obj":"PR:000010844"},{"id":"T84","span":{"begin":1295,"end":1298},"obj":"PR:Q2VPU4"},{"id":"T85","span":{"begin":1295,"end":1298},"obj":"PR:000010182"},{"id":"T86","span":{"begin":1295,"end":1298},"obj":"PR:Q6TEM9"},{"id":"T87","span":{"begin":1330,"end":1340},"obj":"D009362"},{"id":"T88","span":{"begin":1330,"end":1340},"obj":"D009362"},{"id":"T89","span":{"begin":1355,"end":1360},"obj":"UBERON:0001155"},{"id":"T90","span":{"begin":1355,"end":1367},"obj":"D003110"},{"id":"T91","span":{"begin":1355,"end":1367},"obj":"D015179"},{"id":"T92","span":{"begin":1355,"end":1367},"obj":"D003110"},{"id":"T93","span":{"begin":1371,"end":1376},"obj":"PR:Q6ZN28"},{"id":"T94","span":{"begin":1371,"end":1376},"obj":"PR:000010036"},{"id":"T95","span":{"begin":1534,"end":1539},"obj":"PR:Q6ZN28"},{"id":"T96","span":{"begin":1534,"end":1539},"obj":"PR:000010036"},{"id":"T97","span":{"begin":1582,"end":1588},"obj":"D062085"},{"id":"T98","span":{"begin":1623,"end":1636},"obj":"D063646"},{"id":"T99","span":{"begin":1623,"end":1636},"obj":"D063646"},{"id":"T100","span":{"begin":1671,"end":1674},"obj":"PR:000010459"},{"id":"T101","span":{"begin":1671,"end":1674},"obj":"PR:Q9HAP2"},{"id":"T102","span":{"begin":1671,"end":1674},"obj":"PR:Q9DBD2"},{"id":"T103","span":{"begin":1671,"end":1674},"obj":"P13087"},{"id":"T104","span":{"begin":1671,"end":1674},"obj":"D3ZDI6"},{"id":"T105","span":{"begin":1671,"end":1674},"obj":"Q93105"},{"id":"T106","span":{"begin":1671,"end":1674},"obj":"PR:Q5T0T0"},{"id":"T107","span":{"begin":1671,"end":1674},"obj":"Q8BM54"},{"id":"T108","span":{"begin":1671,"end":1674},"obj":"Q8WY64"},{"id":"T109","span":{"begin":1671,"end":1674},"obj":"PR:000010844"},{"id":"T110","span":{"begin":1671,"end":1674},"obj":"PR:Q2VPU4"},{"id":"T111","span":{"begin":1671,"end":1674},"obj":"PR:000010182"},{"id":"T112","span":{"begin":1671,"end":1674},"obj":"PR:Q6TEM9"},{"id":"T113","span":{"begin":1683,"end":1688},"obj":"PR:Q6ZN28"},{"id":"T114","span":{"begin":1683,"end":1688},"obj":"PR:000010036"},{"id":"T115","span":{"begin":1689,"end":1693},"obj":"UBERON:0001093"}],"attributes":[{"subj":"T1","pred":"source","obj":"GoldHamster"},{"subj":"T2","pred":"source","obj":"GoldHamster"},{"subj":"T3","pred":"source","obj":"GoldHamster"},{"subj":"T4","pred":"source","obj":"GoldHamster"},{"subj":"T5","pred":"source","obj":"GoldHamster"},{"subj":"T6","pred":"source","obj":"GoldHamster"},{"subj":"T7","pred":"source","obj":"GoldHamster"},{"subj":"T8","pred":"source","obj":"GoldHamster"},{"subj":"T9","pred":"source","obj":"GoldHamster"},{"subj":"T10","pred":"source","obj":"GoldHamster"},{"subj":"T11","pred":"source","obj":"GoldHamster"},{"subj":"T12","pred":"source","obj":"GoldHamster"},{"subj":"T13","pred":"source","obj":"GoldHamster"},{"subj":"T14","pred":"source","obj":"GoldHamster"},{"subj":"T15","pred":"source","obj":"GoldHamster"},{"subj":"T16","pred":"source","obj":"GoldHamster"},{"subj":"T17","pred":"source","obj":"GoldHamster"},{"subj":"T18","pred":"source","obj":"GoldHamster"},{"subj":"T21","pred":"source","obj":"GoldHamster"},{"subj":"T22","pred":"source","obj":"GoldHamster"},{"subj":"T26","pred":"source","obj":"GoldHamster"},{"subj":"T23","pred":"source","obj":"GoldHamster"},{"subj":"T24","pred":"source","obj":"GoldHamster"},{"subj":"T25","pred":"source","obj":"GoldHamster"},{"subj":"T27","pred":"source","obj":"GoldHamster"},{"subj":"T28","pred":"source","obj":"GoldHamster"},{"subj":"T32","pred":"source","obj":"GoldHamster"},{"subj":"T34","pred":"source","obj":"GoldHamster"},{"subj":"T35","pred":"source","obj":"GoldHamster"},{"subj":"T36","pred":"source","obj":"GoldHamster"},{"subj":"T37","pred":"source","obj":"GoldHamster"},{"subj":"T38","pred":"source","obj":"GoldHamster"},{"subj":"T39","pred":"source","obj":"GoldHamster"},{"subj":"T40","pred":"source","obj":"GoldHamster"},{"subj":"T42","pred":"source","obj":"GoldHamster"},{"subj":"T43","pred":"source","obj":"GoldHamster"},{"subj":"T44","pred":"source","obj":"GoldHamster"},{"subj":"T41","pred":"source","obj":"GoldHamster"},{"subj":"T45","pred":"source","obj":"GoldHamster"},{"subj":"T47","pred":"source","obj":"GoldHamster"},{"subj":"T48","pred":"source","obj":"GoldHamster"},{"subj":"T49","pred":"source","obj":"GoldHamster"},{"subj":"T46","pred":"source","obj":"GoldHamster"},{"subj":"T50","pred":"source","obj":"GoldHamster"},{"subj":"T54","pred":"source","obj":"GoldHamster"},{"subj":"T51","pred":"source","obj":"GoldHamster"},{"subj":"T52","pred":"source","obj":"GoldHamster"},{"subj":"T53","pred":"source","obj":"GoldHamster"},{"subj":"T55","pred":"source","obj":"GoldHamster"},{"subj":"T56","pred":"source","obj":"GoldHamster"},{"subj":"T58","pred":"source","obj":"GoldHamster"},{"subj":"T59","pred":"source","obj":"GoldHamster"},{"subj":"T60","pred":"source","obj":"GoldHamster"},{"subj":"T62","pred":"source","obj":"GoldHamster"},{"subj":"T63","pred":"source","obj":"GoldHamster"},{"subj":"T64","pred":"source","obj":"GoldHamster"},{"subj":"T61","pred":"source","obj":"GoldHamster"},{"subj":"T65","pred":"source","obj":"GoldHamster"},{"subj":"T66","pred":"source","obj":"GoldHamster"},{"subj":"T67","pred":"source","obj":"GoldHamster"},{"subj":"T69","pred":"source","obj":"GoldHamster"},{"subj":"T70","pred":"source","obj":"GoldHamster"},{"subj":"T71","pred":"source","obj":"GoldHamster"},{"subj":"T68","pred":"source","obj":"GoldHamster"},{"subj":"T72","pred":"source","obj":"GoldHamster"},{"subj":"T73","pred":"source","obj":"GoldHamster"},{"subj":"T74","pred":"source","obj":"GoldHamster"},{"subj":"T75","pred":"source","obj":"GoldHamster"},{"subj":"T76","pred":"source","obj":"GoldHamster"},{"subj":"T77","pred":"source","obj":"GoldHamster"},{"subj":"T78","pred":"source","obj":"GoldHamster"},{"subj":"T79","pred":"source","obj":"GoldHamster"},{"subj":"T80","pred":"source","obj":"GoldHamster"},{"subj":"T81","pred":"source","obj":"GoldHamster"},{"subj":"T82","pred":"source","obj":"GoldHamster"},{"subj":"T83","pred":"source","obj":"GoldHamster"},{"subj":"T84","pred":"source","obj":"GoldHamster"},{"subj":"T85","pred":"source","obj":"GoldHamster"},{"subj":"T86","pred":"source","obj":"GoldHamster"},{"subj":"T87","pred":"source","obj":"GoldHamster"},{"subj":"T88","pred":"source","obj":"GoldHamster"},{"subj":"T89","pred":"source","obj":"GoldHamster"},{"subj":"T90","pred":"source","obj":"GoldHamster"},{"subj":"T91","pred":"source","obj":"GoldHamster"},{"subj":"T92","pred":"source","obj":"GoldHamster"},{"subj":"T93","pred":"source","obj":"GoldHamster"},{"subj":"T94","pred":"source","obj":"GoldHamster"},{"subj":"T95","pred":"source","obj":"GoldHamster"},{"subj":"T96","pred":"source","obj":"GoldHamster"},{"subj":"T97","pred":"source","obj":"GoldHamster"},{"subj":"T98","pred":"source","obj":"GoldHamster"},{"subj":"T99","pred":"source","obj":"GoldHamster"},{"subj":"T100","pred":"source","obj":"GoldHamster"},{"subj":"T101","pred":"source","obj":"GoldHamster"},{"subj":"T102","pred":"source","obj":"GoldHamster"},{"subj":"T103","pred":"source","obj":"GoldHamster"},{"subj":"T104","pred":"source","obj":"GoldHamster"},{"subj":"T105","pred":"source","obj":"GoldHamster"},{"subj":"T106","pred":"source","obj":"GoldHamster"},{"subj":"T107","pred":"source","obj":"GoldHamster"},{"subj":"T108","pred":"source","obj":"GoldHamster"},{"subj":"T109","pred":"source","obj":"GoldHamster"},{"subj":"T110","pred":"source","obj":"GoldHamster"},{"subj":"T111","pred":"source","obj":"GoldHamster"},{"subj":"T112","pred":"source","obj":"GoldHamster"},{"subj":"T113","pred":"source","obj":"GoldHamster"},{"subj":"T114","pred":"source","obj":"GoldHamster"},{"subj":"T115","pred":"source","obj":"GoldHamster"}]},{"project":"Goldhamster2_Cellosaurus","denotations":[{"id":"T1","span":{"begin":22,"end":24},"obj":"CVCL_8754|Cancer_cell_line|Homo sapiens"},{"id":"T2","span":{"begin":22,"end":24},"obj":"CVCL_H241|Cancer_cell_line|Homo sapiens"},{"id":"T3","span":{"begin":89,"end":95},"obj":"CVCL_E025|Induced_pluripotent_stem_cell|Homo sapiens"},{"id":"T4","span":{"begin":168,"end":169},"obj":"CVCL_6479|Finite_cell_line|Mus musculus"},{"id":"T5","span":{"begin":206,"end":207},"obj":"CVCL_6479|Finite_cell_line|Mus musculus"},{"id":"T6","span":{"begin":255,"end":256},"obj":"CVCL_6479|Finite_cell_line|Mus musculus"},{"id":"T7","span":{"begin":268,"end":275},"obj":"CVCL_E025|Induced_pluripotent_stem_cell|Homo sapiens"},{"id":"T8","span":{"begin":419,"end":425},"obj":"CVCL_E025|Induced_pluripotent_stem_cell|Homo sapiens"},{"id":"T9","span":{"begin":427,"end":430},"obj":"CVCL_E025|Induced_pluripotent_stem_cell|Homo sapiens"},{"id":"T10","span":{"begin":503,"end":506},"obj":"CVCL_E025|Induced_pluripotent_stem_cell|Homo sapiens"},{"id":"T11","span":{"begin":766,"end":769},"obj":"CVCL_E025|Induced_pluripotent_stem_cell|Homo sapiens"},{"id":"T12","span":{"begin":858,"end":861},"obj":"CVCL_Z093|Spontaneously_immortalized_cell_line|Trichoplusia ni"},{"id":"T13","span":{"begin":1024,"end":1027},"obj":"CVCL_E025|Induced_pluripotent_stem_cell|Homo sapiens"},{"id":"T14","span":{"begin":1115,"end":1117},"obj":"CVCL_8754|Cancer_cell_line|Homo sapiens"},{"id":"T15","span":{"begin":1115,"end":1117},"obj":"CVCL_H241|Cancer_cell_line|Homo sapiens"},{"id":"T16","span":{"begin":1233,"end":1235},"obj":"CVCL_T367|Transformed_cell_line|Chlorocebus aethiops"},{"id":"T17","span":{"begin":1282,"end":1285},"obj":"CVCL_Z424|Spontaneously_immortalized_cell_line|Ostrinia nubilalis"},{"id":"T18","span":{"begin":1361,"end":1367},"obj":"CVCL_E025|Induced_pluripotent_stem_cell|Homo sapiens"},{"id":"T19","span":{"begin":1456,"end":1457},"obj":"CVCL_6479|Finite_cell_line|Mus musculus"},{"id":"T20","span":{"begin":1602,"end":1604},"obj":"CVCL_8754|Cancer_cell_line|Homo sapiens"},{"id":"T21","span":{"begin":1602,"end":1604},"obj":"CVCL_H241|Cancer_cell_line|Homo sapiens"}],"attributes":[{"subj":"T1","pred":"source","obj":"Goldhamster2_Cellosaurus"},{"subj":"T2","pred":"source","obj":"Goldhamster2_Cellosaurus"},{"subj":"T3","pred":"source","obj":"Goldhamster2_Cellosaurus"},{"subj":"T4","pred":"source","obj":"Goldhamster2_Cellosaurus"},{"subj":"T5","pred":"source","obj":"Goldhamster2_Cellosaurus"},{"subj":"T6","pred":"source","obj":"Goldhamster2_Cellosaurus"},{"subj":"T7","pred":"source","obj":"Goldhamster2_Cellosaurus"},{"subj":"T8","pred":"source","obj":"Goldhamster2_Cellosaurus"},{"subj":"T9","pred":"source","obj":"Goldhamster2_Cellosaurus"},{"subj":"T10","pred":"source","obj":"Goldhamster2_Cellosaurus"},{"subj":"T11","pred":"source","obj":"Goldhamster2_Cellosaurus"},{"subj":"T12","pred":"source","obj":"Goldhamster2_Cellosaurus"},{"subj":"T13","pred":"source","obj":"Goldhamster2_Cellosaurus"},{"subj":"T14","pred":"source","obj":"Goldhamster2_Cellosaurus"},{"subj":"T15","pred":"source","obj":"Goldhamster2_Cellosaurus"},{"subj":"T16","pred":"source","obj":"Goldhamster2_Cellosaurus"},{"subj":"T17","pred":"source","obj":"Goldhamster2_Cellosaurus"},{"subj":"T18","pred":"source","obj":"Goldhamster2_Cellosaurus"},{"subj":"T19","pred":"source","obj":"Goldhamster2_Cellosaurus"},{"subj":"T20","pred":"source","obj":"Goldhamster2_Cellosaurus"},{"subj":"T21","pred":"source","obj":"Goldhamster2_Cellosaurus"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"PubMed_ArguminSci","color":"#ec93d0","default":true},{"id":"GoldHamster","color":"#93eaec"},{"id":"Goldhamster2_Cellosaurus","color":"#ecd493"}]}]}}