PubMed:31138793
Annnotations
PubMed_ArguminSci
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 110-198 | DRI_Approach | denotes | Regulatory T cells (Tregs) have crucial functions in the inhibition of immune responses. |
T2 | 199-367 | DRI_Background | denotes | Their development and suppressive functions are controlled by the T cell receptor (TCR), but the TCR signaling mechanisms that mediate these effects remain ill-defined. |
T3 | 368-560 | DRI_Outcome | denotes | Here we show that CARD11-BCL10-MALT1 (CBM) signaling mediates TCR-induced NF-κB activation in Tregs and controls the conversion of resting Tregs to effector Tregs under homeostatic conditions. |
T4 | 561-666 | DRI_Approach | denotes | However, in inflammatory milieus, cytokines can bypass the CBM requirement for this differentiation step. |
T5 | 667-699 | DRI_Background | denotes | By contrast, CBM signaling, in a |
T6 | 725-794 | DRI_Background | denotes | manner, is essential for mediating the suppressive function of Tregs. |
T7 | 795-961 | DRI_Background | denotes | In malignant melanoma models, acute genetic blockade of BCL10 signaling selectively in Tregs or pharmacological MALT1 inhibition enhances anti-tumor immune responses. |
T8 | 962-1155 | DRI_Approach | denotes | Together, our data uncover a segregation of Treg differentiation and suppressive function at the CBM complex level, and provide a rationale to explore MALT1 inhibitors for cancer immunotherapy. |
Goldhamster2_Cellosaurus
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 35-43 | CVCL_C410|Hybridoma|Mus musculus | denotes | activity |
T2 | 373-375 | CVCL_5M23|Cancer_cell_line|Mesocricetus auratus | denotes | we |
T3 | 442-444 | CVCL_W770|Cancer_cell_line|Homo sapiens | denotes | NF |
T4 | 446-447 | CVCL_6480|Finite_cell_line|Mus musculus | denotes | B |
T5 | 448-458 | CVCL_C410|Hybridoma|Mus musculus | denotes | activation |
T6 | 698-699 | CVCL_6479|Finite_cell_line|Mus musculus | denotes | a |
T7 | 989-990 | CVCL_6479|Finite_cell_line|Mus musculus | denotes | a |
T8 | 1090-1091 | CVCL_6479|Finite_cell_line|Mus musculus | denotes | a |
T9 | 1134-1140 | CVCL_E025|Induced_pluripotent_stem_cell|Homo sapiens | denotes | cancer |
GoldHamster
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 0-5 | PR:Q9Z0H7 | denotes | Bcl10 |
T2 | 0-5 | PR:000004689 | denotes | Bcl10 |
T3 | 0-5 | Q9QYN5 | denotes | Bcl10 |
T4 | 0-5 | PR:O95999 | denotes | Bcl10 |
T5 | 0-5 | Q9Z0H7 | denotes | Bcl10 |
T6 | 0-5 | O95999 | denotes | Bcl10 |
T7 | 0-5 | PR:Q9QYN5 | denotes | Bcl10 |
T10 | 17-21 | UBERON:0001961 | denotes | Malt |
T11 | 17-22 | PR:Q9UDY8 | denotes | Malt1 |
T12 | 17-22 | PR:Q2TBA3 | denotes | Malt1 |
T13 | 17-22 | PR:000010096 | denotes | Malt1 |
T14 | 17-34 | D000074884 | denotes | Malt1 paracaspase |
T15 | 23-34 | Q2TBA3 | denotes | paracaspase |
T16 | 23-34 | Q9GPM2 | denotes | paracaspase |
T17 | 23-34 | Q9UDY8 | denotes | paracaspase |
T19 | 23-34 | PR:000010096 | denotes | paracaspase |
T20 | 265-271 | CL:0000084 | denotes | T cell |
T21 | 265-280 | D011948 | denotes | T cell receptor |
T22 | 282-285 | PR:000015975 | denotes | TCR |
T24 | 282-285 | A2KF29 | denotes | TCR |
T25 | 282-285 | GO:0042101 | denotes | TCR |
T23 | 282-285 | GO:0006283 | denotes | TCR |
T26 | 296-299 | PR:000015975 | denotes | TCR |
T28 | 296-299 | A2KF29 | denotes | TCR |
T29 | 296-299 | GO:0042101 | denotes | TCR |
T27 | 296-299 | GO:0006283 | denotes | TCR |
T30 | 300-309 | GO:0023052 | denotes | signaling |
T31 | 386-392 | PR:Q9BXL7 | denotes | CARD11 |
T32 | 386-392 | PR:Q8CIS0 | denotes | CARD11 |
T33 | 386-392 | PR:000005034 | denotes | CARD11 |
T34 | 393-398 | PR:Q9Z0H7 | denotes | BCL10 |
T35 | 393-398 | PR:000004689 | denotes | BCL10 |
T36 | 393-398 | Q9QYN5 | denotes | BCL10 |
T37 | 393-398 | PR:O95999 | denotes | BCL10 |
T38 | 393-398 | Q9Z0H7 | denotes | BCL10 |
T39 | 393-398 | O95999 | denotes | BCL10 |
T40 | 393-398 | PR:Q9QYN5 | denotes | BCL10 |
T43 | 399-403 | UBERON:0001961 | denotes | MALT |
T44 | 399-404 | PR:Q9UDY8 | denotes | MALT1 |
T45 | 399-404 | PR:Q2TBA3 | denotes | MALT1 |
T46 | 399-404 | PR:000010096 | denotes | MALT1 |
T47 | 411-420 | GO:0023052 | denotes | signaling |
T48 | 430-433 | PR:000015975 | denotes | TCR |
T50 | 430-433 | A2KF29 | denotes | TCR |
T51 | 430-433 | GO:0042101 | denotes | TCR |
T49 | 430-433 | GO:0006283 | denotes | TCR |
T54 | 516-524 | CHEBI:35224 | denotes | effector |
T55 | 595-604 | D016207 | denotes | cytokines |
T56 | 595-604 | D016207 | denotes | cytokines |
T57 | 684-693 | GO:0023052 | denotes | signaling |
T60 | 700-704 | UBERON:0001961 | denotes | MALT |
T61 | 700-705 | PR:Q9UDY8 | denotes | MALT1 |
T62 | 700-705 | PR:Q2TBA3 | denotes | MALT1 |
T63 | 700-705 | PR:000010096 | denotes | MALT1 |
T64 | 706-714 | P68985 | denotes | protease |
T65 | 706-714 | P30202 | denotes | protease |
T66 | 706-714 | P42672 | denotes | protease |
T67 | 706-714 | P11826 | denotes | protease |
T68 | 706-714 | Q5TJ03 | denotes | protease |
T69 | 706-714 | O71070 | denotes | protease |
T70 | 706-714 | P63122 | denotes | protease |
T71 | 706-714 | P63131 | denotes | protease |
T72 | 706-714 | Q9IIH4 | denotes | protease |
T73 | 706-714 | P10270 | denotes | protease |
T74 | 706-714 | Q8JN66 | denotes | protease |
T75 | 706-714 | O40958 | denotes | protease |
T76 | 706-714 | P10265 | denotes | protease |
T77 | 706-714 | Q9QM72 | denotes | protease |
T78 | 706-714 | P63119 | denotes | protease |
T79 | 706-714 | Q9WF19 | denotes | protease |
T80 | 706-714 | P63120 | denotes | protease |
T81 | 706-714 | P63125 | denotes | protease |
T82 | 706-714 | P63124 | denotes | protease |
T83 | 706-714 | P68986 | denotes | protease |
T84 | 706-714 | Q96629 | denotes | protease |
T85 | 706-714 | P63121 | denotes | protease |
T86 | 706-714 | P09569 | denotes | protease |
T87 | 706-714 | P03253 | denotes | protease |
T88 | 706-714 | P63129 | denotes | protease |
T89 | 706-714 | P10381 | denotes | protease |
T90 | 706-714 | P07885 | denotes | protease |
T91 | 706-714 | Q83906 | denotes | protease |
T92 | 706-714 | P19119 | denotes | protease |
T93 | 706-714 | P63127 | denotes | protease |
T94 | 706-714 | Q84177 | denotes | protease |
T95 | 706-714 | P19151 | denotes | protease |
T96 | 706-714 | Q9Y6I0 | denotes | protease |
T97 | 706-714 | P63123 | denotes | protease |
T98 | 706-714 | P68984 | denotes | protease |
T99 | 706-714 | P87563 | denotes | protease |
T100 | 706-714 | P03252 | denotes | protease |
T101 | 706-714 | O71150 | denotes | protease |
T102 | 706-714 | P11825 | denotes | protease |
T103 | 798-816 | D008545 | denotes | malignant melanoma |
T104 | 798-816 | D008545 | denotes | malignant melanoma |
T107 | 851-856 | PR:Q9Z0H7 | denotes | BCL10 |
T108 | 851-856 | PR:000004689 | denotes | BCL10 |
T109 | 851-856 | Q9QYN5 | denotes | BCL10 |
T110 | 851-856 | PR:O95999 | denotes | BCL10 |
T111 | 851-856 | Q9Z0H7 | denotes | BCL10 |
T112 | 851-856 | O95999 | denotes | BCL10 |
T113 | 851-856 | PR:Q9QYN5 | denotes | BCL10 |
T114 | 857-866 | GO:0023052 | denotes | signaling |
T117 | 907-911 | UBERON:0001961 | denotes | MALT |
T118 | 907-912 | PR:Q9UDY8 | denotes | MALT1 |
T119 | 907-912 | PR:Q2TBA3 | denotes | MALT1 |
T120 | 907-912 | PR:000010096 | denotes | MALT1 |
T121 | 938-943 | D009369 | denotes | tumor |
T122 | 938-943 | D009369 | denotes | tumor |
T123 | 1006-1010 | CL:0000792 | denotes | Treg |
T124 | 1006-1010 | CL:0000815 | denotes | Treg |
T125 | 1059-1070 | GO:0032449 | denotes | CBM complex |
T128 | 1113-1117 | UBERON:0001961 | denotes | MALT |
T129 | 1113-1118 | PR:Q9UDY8 | denotes | MALT1 |
T130 | 1113-1118 | PR:Q2TBA3 | denotes | MALT1 |
T131 | 1113-1118 | PR:000010096 | denotes | MALT1 |
T132 | 1119-1129 | CHEBI:35222 | denotes | inhibitors |
GlyCosmos15-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T1 | 798-816 | Phenotype | denotes | malignant melanoma | HP:0002861 |
T2 | 938-943 | Phenotype | denotes | tumor | HP:0002664 |
T3 | 1134-1140 | Phenotype | denotes | cancer | HP:0002664 |
mondo_disease
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T1 | 59-77 | Disease | denotes | immune suppressive | http://purl.obolibrary.org/obo/MONDO_0007816 |
T2 | 798-816 | Disease | denotes | malignant melanoma | http://purl.obolibrary.org/obo/MONDO_0005105 |
T3 | 938-943 | Disease | denotes | tumor | http://purl.obolibrary.org/obo/MONDO_0005070 |
T4 | 1134-1140 | Disease | denotes | cancer | http://purl.obolibrary.org/obo/MONDO_0004992 |
Anatomy-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T1 | 265-271 | Body_part | denotes | T cell | http://purl.obolibrary.org/obo/CL_0000084 |
Glycosmos15-CL
Id | Subject | Object | Predicate | Lexical cue | cl_id |
---|---|---|---|---|---|
T1 | 90-108 | Cell | denotes | regulatory T cells | http://purl.obolibrary.org/obo/CL:0000815 |
T2 | 110-128 | Cell | denotes | Regulatory T cells | http://purl.obolibrary.org/obo/CL:0000815 |
T3 | 265-271 | Cell | denotes | T cell | http://purl.obolibrary.org/obo/CL:0000084 |
T4 | 1006-1010 | Cell | denotes | Treg | http://purl.obolibrary.org/obo/CL:0000792|http://purl.obolibrary.org/obo/CL:0000815 |