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PubMed_ArguminSci

Id Subject Object Predicate Lexical cue
T1 124-258 DRI_Challenge denotes Staphylococcus aureus is the most commonly isolated pathogen from clinical bovine mastitis samples and a difficult pathogen to combat.
T2 259-386 DRI_Background denotes Mesenchymal stem cells (MSC) are multipotent progenitor cells equipped with a variety of factors that inhibit bacterial growth.
T3 387-598 DRI_Background denotes The aim of the present study was to evaluate the in vitro antibacterial potential against S. aureus of conditioned medium (CM) from MSC derived from fetal bovine bone marrow (BM-MSC) and adipose tissue (AT-MSC).
T4 599-693 DRI_Background denotes BM-MSC, AT-MSC and fetal fibroblasts (FB) cultures were activated by infection with S. aureus.
T5 694-841 DRI_Background denotes Bacterial growth was evaluated in presence of CM, concentrated CM (CCM), activated CM (ACM) and concentrated ACM (CACM) from BM-MSC, AT-MSC and FB.
T6 842-1068 DRI_Approach denotes Gene expression of β-defensin 4A (bBD-4A), NK-lysine 1 (NK1), cathelicidin 2 (CATHL2), hepcidin (HEP) and indoleamine 2,3 dioxygenase (IDO) and protein expression of bBD-4A were determined in activated and non-activated cells.
T7 1069-1162 DRI_Background denotes The majority of BM-MSC and AT-MSC expressed CD73, Oct4 and Nanog, and were negative for CD34.
T8 1163-1246 DRI_Background denotes Growth of S. aureus decreased when it was exposed to CM from BM-MSC, AT-MSC and FB.
T9 1247-1358 DRI_Background denotes Moreover, growth of S. aureus in CCM, ACM and CACM was lower compared to controls of CM from BM-MSC and AT-MSC.
T10 1359-1450 DRI_Background denotes Activated AT-MSC increased mRNA levels of bBD4A and NK1, and protein levels of bBD4A in CM.
T11 1451-1594 DRI_Approach denotes Thus, CM from fetal bovine BM-MSC and AT-MSC has the capacity to reduce in average ~30% of S. aureus relative growth under in vitro conditions.
T12 1595-1691 DRI_Outcome denotes The in vitro antibacterial effect of fetal bovine MSC may be mediated by bBD4A and NK1 activity.

GoldHamster

Id Subject Object Predicate Lexical cue
T1 0-6 9913 denotes Bovine
T2 75-83 D008413 denotes mastitis
T3 75-83 D008413 denotes mastitis
T5 101-122 D013211 denotes Staphylococcus aureus
T6 101-122 1280 denotes Staphylococcus aureus
T7 199-205 9913 denotes bovine
T8 199-214 D008414 denotes bovine mastitis
T9 199-214 D008414 denotes bovine mastitis
T12 283-286 PR:000010664 denotes MSC
T13 283-286 PR:O60682 denotes MSC
T14 283-286 PR:O88940 denotes MSC
T15 283-286 CL:0000134 denotes MSC
T16 490-508 D017077 denotes conditioned medium
T17 519-522 PR:000010664 denotes MSC
T18 519-522 PR:O60682 denotes MSC
T19 519-522 PR:O88940 denotes MSC
T20 519-522 CL:0000134 denotes MSC
T21 542-548 9913 denotes bovine
T22 542-560 CVCL_4399 denotes bovine bone marrow
T26 549-560 UBERON:0002371 denotes bone marrow
T25 549-560 D001855 denotes bone marrow
T27 549-560 D001855 denotes bone marrow
T28 565-568 PR:000010664 denotes MSC
T29 565-568 PR:O60682 denotes MSC
T30 565-568 PR:O88940 denotes MSC
T31 565-568 CL:0000134 denotes MSC
T33 574-588 UBERON:0001013 denotes adipose tissue
T35 593-596 PR:000010664 denotes MSC
T36 593-596 PR:O60682 denotes MSC
T37 593-596 PR:O88940 denotes MSC
T38 593-596 CL:0000134 denotes MSC
T39 602-605 PR:000010664 denotes MSC
T40 602-605 PR:O60682 denotes MSC
T41 602-605 PR:O88940 denotes MSC
T42 602-605 CL:0000134 denotes MSC
T43 610-613 PR:000010664 denotes MSC
T44 610-613 PR:O60682 denotes MSC
T45 610-613 PR:O88940 denotes MSC
T46 610-613 CL:0000134 denotes MSC
T47 668-677 D007239 denotes infection
T48 668-677 D007239 denotes infection
T49 761-764 CVCL_2613 denotes CCM
T50 761-764 CVCL_R825 denotes CCM
T51 761-764 D020786 denotes CCM
T52 781-784 UBERON:0012649 denotes ACM
T53 803-806 UBERON:0012649 denotes ACM
T54 822-825 PR:000010664 denotes MSC
T55 822-825 PR:O60682 denotes MSC
T56 822-825 PR:O88940 denotes MSC
T57 822-825 CL:0000134 denotes MSC
T58 830-833 PR:000010664 denotes MSC
T59 830-833 PR:O60682 denotes MSC
T60 830-833 PR:O88940 denotes MSC
T61 830-833 CL:0000134 denotes MSC
T62 842-857 GO:0010467 denotes Gene expression
T63 863-871 Q86QN6 denotes defensin
T64 863-871 Q5BU36 denotes defensin
T65 863-871 P83404 denotes defensin
T66 863-871 C0HJX7 denotes defensin
T67 863-871 P80407 denotes defensin
T68 863-871 P37364 denotes defensin
T69 863-871 Q10745 denotes defensin
T70 863-871 Q17027 denotes defensin
T71 863-871 Q8WQZ3 denotes defensin
T72 863-871 P85213 denotes defensin
T73 863-871 Q86LE4 denotes defensin
T74 863-871 P81462 denotes defensin
T76 863-871 Q86QI5 denotes defensin
T77 863-871 B2D2C0 denotes defensin
T78 863-871 O96049 denotes defensin
T79 863-871 P80154 denotes defensin
T80 863-871 P36192 denotes defensin
T75 863-871 CHEBI:82761 denotes defensin
T84 888-894 6536 denotes lysine
T81 888-894 SO:0001450 denotes lysine
T82 888-894 CHEBI:25094 denotes lysine
T83 888-894 D008239 denotes lysine
T85 888-894 D008239 denotes lysine
T86 888-894 CHEBI:18019 denotes lysine
T87 898-901 PR:P22807 denotes NK1
T88 904-916 C070646 denotes cathelicidin
T89 904-916 CHEBI:81578 denotes cathelicidin
T90 904-916 C070646 denotes cathelicidin
T91 904-918 P19660 denotes cathelicidin 2
T92 904-918 P82018 denotes cathelicidin 2
T93 904-918 Q2IAL7 denotes cathelicidin 2
T94 904-918 P79362 denotes cathelicidin 2
T95 920-926 PR:Q2IAL7 denotes CATHL2
T96 929-937 PR:000008438 denotes hepcidin
T97 929-937 Q99MH3 denotes hepcidin
T98 929-937 P82951 denotes hepcidin
T99 929-937 Q5U9D2 denotes hepcidin
T100 929-937 Q9DFD6 denotes hepcidin
T101 929-937 Q9EQ21 denotes hepcidin
T102 929-937 P81172 denotes hepcidin
T103 929-937 Q5NVR8 denotes hepcidin
T104 929-937 Q8MJ80 denotes hepcidin
T106 929-937 A1Z0M0 denotes hepcidin
T105 929-937 D064451 denotes hepcidin
T108 939-942 PR:000008741 denotes HEP
T109 939-942 PR:Q23977 denotes HEP
T110 939-942 PR:Q9Y251 denotes HEP
T112 939-942 PR:Q71RP1 denotes HEP
T113 939-942 O15197 denotes HEP
T114 939-942 PR:000007133 denotes HEP
T107 939-942 CHEBI:48293 denotes HEP
T111 939-942 CHEBI:60991 denotes HEP
T116 948-975 P47125 denotes indoleamine 2,3 dioxygenase
T117 948-975 PR:000009030 denotes indoleamine 2,3 dioxygenase
T118 948-975 D050503 denotes indoleamine 2,3 dioxygenase
T119 964-980 D050503 denotes dioxygenase (IDO
T120 977-980 PR:P28776 denotes IDO
T121 977-980 PR:P14902 denotes IDO
T122 977-980 P47125 denotes IDO
T124 977-980 PR:000009030 denotes IDO
T125 977-980 E2GIN1 denotes IDO
T128 977-980 PR:Q9ERD9 denotes IDO
T126 977-980 GO:0033754 denotes IDO
T127 977-980 GO:0047719 denotes IDO
T133 986-993 SO:0000104 denotes protein
T132 986-993 PR:000000001 denotes protein
T129 986-993 GO:0003675 denotes protein
T130 986-993 CHEBI:36080 denotes protein
T131 986-993 CHEBI:11122 denotes protein
T134 1088-1091 PR:000010664 denotes MSC
T135 1088-1091 PR:O60682 denotes MSC
T136 1088-1091 PR:O88940 denotes MSC
T137 1088-1091 CL:0000134 denotes MSC
T138 1099-1102 PR:000010664 denotes MSC
T139 1099-1102 PR:O60682 denotes MSC
T140 1099-1102 PR:O88940 denotes MSC
T141 1099-1102 CL:0000134 denotes MSC
T142 1113-1117 PR:000001800 denotes CD73
T143 1119-1123 P20263 denotes Oct4
T144 1119-1123 Q5TM49 denotes Oct4
T145 1119-1123 Q9TSV5 denotes Oct4
T146 1119-1123 PR:P20263 denotes Oct4
T147 1119-1123 PR:Q01860 denotes Oct4
T148 1119-1123 PR:Q9LHQ6 denotes Oct4
T149 1119-1123 Q01860 denotes Oct4
T150 1119-1123 PR:000013044 denotes Oct4
T151 1128-1133 PR:A7Y7W3 denotes Nanog
T152 1128-1133 PR:Q80Z64 denotes Nanog
T153 1128-1133 PR:000010968 denotes Nanog
T154 1128-1133 PR:Q9H9S0 denotes Nanog
T155 1157-1161 PR:P28906 denotes CD34
T156 1157-1161 PR:000001003 denotes CD34
T157 1157-1161 PR:Q64314 denotes CD34
T158 1227-1230 PR:000010664 denotes MSC
T159 1227-1230 PR:O60682 denotes MSC
T160 1227-1230 PR:O88940 denotes MSC
T161 1227-1230 CL:0000134 denotes MSC
T162 1235-1238 PR:000010664 denotes MSC
T163 1235-1238 PR:O60682 denotes MSC
T164 1235-1238 PR:O88940 denotes MSC
T165 1235-1238 CL:0000134 denotes MSC
T166 1280-1283 CVCL_2613 denotes CCM
T167 1280-1283 CVCL_R825 denotes CCM
T168 1280-1283 D020786 denotes CCM
T169 1285-1288 UBERON:0012649 denotes ACM
T170 1343-1346 PR:000010664 denotes MSC
T171 1343-1346 PR:O60682 denotes MSC
T172 1343-1346 PR:O88940 denotes MSC
T173 1343-1346 CL:0000134 denotes MSC
T174 1354-1357 PR:000010664 denotes MSC
T175 1354-1357 PR:O60682 denotes MSC
T176 1354-1357 PR:O88940 denotes MSC
T177 1354-1357 CL:0000134 denotes MSC
T178 1372-1375 PR:000010664 denotes MSC
T179 1372-1375 PR:O60682 denotes MSC
T180 1372-1375 PR:O88940 denotes MSC
T181 1372-1375 CL:0000134 denotes MSC
T184 1386-1390 SO:0000234 denotes mRNA
T182 1386-1390 D012333 denotes mRNA
T183 1386-1390 CHEBI:33699 denotes mRNA
T185 1411-1414 PR:P22807 denotes NK1
T189 1420-1427 PR:000000001 denotes protein
T190 1420-1427 SO:0000104 denotes protein
T186 1420-1427 GO:0003675 denotes protein
T187 1420-1427 CHEBI:36080 denotes protein
T188 1420-1427 CHEBI:11122 denotes protein
T191 1471-1477 9913 denotes bovine
T192 1481-1484 PR:000010664 denotes MSC
T193 1481-1484 PR:O60682 denotes MSC
T194 1481-1484 PR:O88940 denotes MSC
T195 1481-1484 CL:0000134 denotes MSC
T196 1492-1495 PR:000010664 denotes MSC
T197 1492-1495 PR:O60682 denotes MSC
T198 1492-1495 PR:O88940 denotes MSC
T199 1492-1495 CL:0000134 denotes MSC
T200 1638-1644 9913 denotes bovine
T201 1645-1648 PR:000010664 denotes MSC
T202 1645-1648 PR:O60682 denotes MSC
T203 1645-1648 PR:O88940 denotes MSC
T204 1645-1648 CL:0000134 denotes MSC
T205 1678-1681 PR:P22807 denotes NK1

Goldhamster2_Cellosaurus

Id Subject Object Predicate Lexical cue
T1 227-228 CVCL_6479|Finite_cell_line|Mus musculus denotes a
T2 335-336 CVCL_6479|Finite_cell_line|Mus musculus denotes a
T3 510-512 CVCL_H246|Cancer_cell_line|Homo sapiens denotes CM
T4 542-560 CVCL_4399|Finite_cell_line|Bos taurus denotes bovine bone marrow
T5 562-564 CVCL_E481|Transformed_cell_line|Homo sapiens denotes BM
T6 562-564 CVCL_S926|Spontaneously_immortalized_cell_line|Lates calcarifer denotes BM
T7 599-601 CVCL_E481|Transformed_cell_line|Homo sapiens denotes BM
T8 599-601 CVCL_S926|Spontaneously_immortalized_cell_line|Lates calcarifer denotes BM
T9 655-664 CVCL_C410|Hybridoma|Mus musculus denotes activated
T10 740-742 CVCL_H246|Cancer_cell_line|Homo sapiens denotes CM
T11 757-759 CVCL_H246|Cancer_cell_line|Homo sapiens denotes CM
T12 761-764 CVCL_2613|Cancer_cell_line|Homo sapiens denotes CCM
T13 761-764 CVCL_R825|Spontaneously_immortalized_cell_line|Labeo catla denotes CCM
T14 761-764 CVCL_H246|Cancer_cell_line|Homo sapiens denotes CCM
T15 767-776 CVCL_C410|Hybridoma|Mus musculus denotes activated
T16 777-779 CVCL_H246|Cancer_cell_line|Homo sapiens denotes CM
T17 819-821 CVCL_E481|Transformed_cell_line|Homo sapiens denotes BM
T18 819-821 CVCL_S926|Spontaneously_immortalized_cell_line|Lates calcarifer denotes BM
T19 885-887 CVCL_1D01|Cancer_cell_line|Rattus norvegicus denotes NK
T20 1034-1043 CVCL_C410|Hybridoma|Mus musculus denotes activated
T21 1052-1061 CVCL_C410|Hybridoma|Mus musculus denotes activated
T22 1085-1087 CVCL_E481|Transformed_cell_line|Homo sapiens denotes BM
T23 1085-1087 CVCL_S926|Spontaneously_immortalized_cell_line|Lates calcarifer denotes BM
T24 1216-1218 CVCL_H246|Cancer_cell_line|Homo sapiens denotes CM
T25 1224-1226 CVCL_E481|Transformed_cell_line|Homo sapiens denotes BM
T26 1224-1226 CVCL_S926|Spontaneously_immortalized_cell_line|Lates calcarifer denotes BM
T27 1280-1283 CVCL_2613|Cancer_cell_line|Homo sapiens denotes CCM
T28 1280-1283 CVCL_R825|Spontaneously_immortalized_cell_line|Labeo catla denotes CCM
T29 1280-1283 CVCL_H246|Cancer_cell_line|Homo sapiens denotes CCM
T30 1332-1334 CVCL_H246|Cancer_cell_line|Homo sapiens denotes CM
T31 1340-1342 CVCL_E481|Transformed_cell_line|Homo sapiens denotes BM
T32 1340-1342 CVCL_S926|Spontaneously_immortalized_cell_line|Lates calcarifer denotes BM
T33 1359-1368 CVCL_C410|Hybridoma|Mus musculus denotes Activated
T34 1447-1449 CVCL_H246|Cancer_cell_line|Homo sapiens denotes CM
T35 1457-1459 CVCL_H246|Cancer_cell_line|Homo sapiens denotes CM
T36 1478-1480 CVCL_E481|Transformed_cell_line|Homo sapiens denotes BM
T37 1478-1480 CVCL_S926|Spontaneously_immortalized_cell_line|Lates calcarifer denotes BM
T38 1496-1499 CVCL_6758|Undefined_cell_line_type|Cricetulus griseus denotes has
T39 1496-1499 CVCL_E689|Transformed_cell_line|Homo sapiens denotes has
T40 1535-1537 CVCL_J925|Hybridoma|Mus musculus denotes 30
T41 1649-1652 CVCL_E773|Transformed_cell_line|Homo sapiens denotes may
T42 1682-1690 CVCL_C410|Hybridoma|Mus musculus denotes activity