PubMed:3094936
Annnotations
GlyCosmos6-Glycan-Motif-Image
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 26-47 | Glycan_Motif | denotes | N-acetylgalactosamine | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G27025MB |
| T2 | 61-72 | Glycan_Motif | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT |
| T3 | 196-217 | Glycan_Motif | denotes | N-acetylgalactosamine | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G27025MB |
| T4 | 673-684 | Glycan_Motif | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT |
| T5 | 1261-1282 | Glycan_Motif | denotes | chondroitin 4-sulfate | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G19059PI |
| T6 | 1261-1272 | Glycan_Motif | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT |
| T7 | 1416-1437 | Glycan_Motif | denotes | chondroitin 6-sulfate | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G34992DF |
| T8 | 1416-1427 | Glycan_Motif | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT |
Glycosmos6-MAT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 1394-1403 | http://purl.obolibrary.org/obo/MAT_0000189 | denotes | cartilage |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| TextSentencer_T1 | 0-90 | Sentence | denotes | The effect of penultimate N-acetylgalactosamine 4-sulfate on chondroitin chain elongation. |
| TextSentencer_T2 | 91-319 | Sentence | denotes | Previous work has shown that odd-numbered oligosaccharides containing nonreducing terminal, non-sulfated N-acetylgalactosamine (GalNAc) or 6-sulfated GalNAc are excellent acceptors for enzymic addition of glucuronic acid (GlcA). |
| TextSentencer_T3 | 320-395 | Sentence | denotes | However, the presence of a 4-sulfated GalNAc group blocks further addition. |
| TextSentencer_T4 | 396-615 | Sentence | denotes | We have now used even-numbered oligosaccharides (a mixture of 4-sulfated, 6-sulfated, and non-sulfated) as acceptors of [3H]GalNAc to investigate the effect of sulfate residues on the GalNAc in the penultimate position. |
| TextSentencer_T5 | 616-694 | Sentence | denotes | 3H-Labeled oligosaccharides were partially degraded with chondroitin AC lyase. |
| TextSentencer_T6 | 695-859 | Sentence | denotes | The labeled trisaccharides, consisting of the added [3H]GalNAc and the nonreducing terminal disaccharides of the oligosaccharide acceptors, were then characterized. |
| TextSentencer_T7 | 860-928 | Sentence | denotes | Both non-sulfated and mono-sulfated 3H-trisaccharides were observed. |
| TextSentencer_T8 | 929-1073 | Sentence | denotes | However, the 3H-trisaccharides were shown by chromatography with prepared standards to be non-sulfated or to be sulfated only at the 6-position. |
| TextSentencer_T9 | 1074-1209 | Sentence | denotes | Thus the oligosaccharides containing a 4-sulfated, penultimate GalNAc at the nonreducing end did not serve as acceptors for [3H]GalNAc. |
| TextSentencer_T10 | 1210-1438 | Sentence | denotes | Microsomes from mastocytoma cells, which make only chondroitin 4-sulfate, exhibited the same substrate specificity for exogenous oligosaccharide acceptors as did microsomes from chick cartilage which makes chondroitin 6-sulfate. |
| T1 | 0-90 | Sentence | denotes | The effect of penultimate N-acetylgalactosamine 4-sulfate on chondroitin chain elongation. |
| T2 | 91-319 | Sentence | denotes | Previous work has shown that odd-numbered oligosaccharides containing nonreducing terminal, non-sulfated N-acetylgalactosamine (GalNAc) or 6-sulfated GalNAc are excellent acceptors for enzymic addition of glucuronic acid (GlcA). |
| T3 | 320-395 | Sentence | denotes | However, the presence of a 4-sulfated GalNAc group blocks further addition. |
| T4 | 396-615 | Sentence | denotes | We have now used even-numbered oligosaccharides (a mixture of 4-sulfated, 6-sulfated, and non-sulfated) as acceptors of [3H]GalNAc to investigate the effect of sulfate residues on the GalNAc in the penultimate position. |
| T5 | 616-694 | Sentence | denotes | 3H-Labeled oligosaccharides were partially degraded with chondroitin AC lyase. |
| T6 | 695-859 | Sentence | denotes | The labeled trisaccharides, consisting of the added [3H]GalNAc and the nonreducing terminal disaccharides of the oligosaccharide acceptors, were then characterized. |
| T7 | 860-928 | Sentence | denotes | Both non-sulfated and mono-sulfated 3H-trisaccharides were observed. |
| T8 | 929-1073 | Sentence | denotes | However, the 3H-trisaccharides were shown by chromatography with prepared standards to be non-sulfated or to be sulfated only at the 6-position. |
| T9 | 1074-1209 | Sentence | denotes | Thus the oligosaccharides containing a 4-sulfated, penultimate GalNAc at the nonreducing end did not serve as acceptors for [3H]GalNAc. |
| T10 | 1210-1438 | Sentence | denotes | Microsomes from mastocytoma cells, which make only chondroitin 4-sulfate, exhibited the same substrate specificity for exogenous oligosaccharide acceptors as did microsomes from chick cartilage which makes chondroitin 6-sulfate. |
GlyCosmos6-Glycan-Motif-Structure
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 26-47 | https://glytoucan.org/Structures/Glycans/G27025MB | denotes | N-acetylgalactosamine |
| T2 | 61-72 | https://glytoucan.org/Structures/Glycans/G43702JT | denotes | chondroitin |
| T3 | 196-217 | https://glytoucan.org/Structures/Glycans/G27025MB | denotes | N-acetylgalactosamine |
| T4 | 673-684 | https://glytoucan.org/Structures/Glycans/G43702JT | denotes | chondroitin |
| T5 | 1261-1282 | https://glytoucan.org/Structures/Glycans/G19059PI | denotes | chondroitin 4-sulfate |
| T6 | 1261-1272 | https://glytoucan.org/Structures/Glycans/G43702JT | denotes | chondroitin |
| T7 | 1416-1437 | https://glytoucan.org/Structures/Glycans/G34992DF | denotes | chondroitin 6-sulfate |
| T8 | 1416-1427 | https://glytoucan.org/Structures/Glycans/G43702JT | denotes | chondroitin |
Glycosmos6-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 61-72 | http://www.glycoepitope.jp/epitopes/EP0081 | denotes | chondroitin |
| T2 | 673-684 | http://www.glycoepitope.jp/epitopes/EP0081 | denotes | chondroitin |
| T3 | 1261-1282 | http://www.glycoepitope.jp/epitopes/EP0082 | denotes | chondroitin 4-sulfate |
| T4 | 1261-1272 | http://www.glycoepitope.jp/epitopes/EP0081 | denotes | chondroitin |
| T5 | 1416-1437 | http://www.glycoepitope.jp/epitopes/EP0083 | denotes | chondroitin 6-sulfate |
| T6 | 1416-1427 | http://www.glycoepitope.jp/epitopes/EP0081 | denotes | chondroitin |
GlyCosmos15-Glycan
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 61-72 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T2 | 219-225 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
| T3 | 241-247 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
| T4 | 358-364 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
| T5 | 520-526 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
| T6 | 580-586 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
| T7 | 673-684 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T8 | 751-757 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
| T9 | 1137-1143 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
| T10 | 1202-1208 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
| T11 | 1261-1282 | Glycan | denotes | chondroitin 4-sulfate | https://api.glycosmos.org/wurcs2image/latest/png/binary/G19059PI |
| T12 | 1416-1437 | Glycan | denotes | chondroitin 6-sulfate | https://api.glycosmos.org/wurcs2image/latest/png/binary/G34992DF |
HP-phenotype
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T1 | 120-123 | Phenotype | denotes | odd | HP:0010865 |
mondo_disease
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 1226-1237 | Disease | denotes | mastocytoma | http://purl.obolibrary.org/obo/MONDO_0002724|http://purl.obolibrary.org/obo/MONDO_0003079 |
Glycan-GlyCosmos
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 61-72 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T2 | 219-225 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
| T3 | 241-247 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
| T4 | 358-364 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
| T5 | 520-526 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
| T6 | 580-586 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
| T7 | 673-684 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T8 | 751-757 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
| T9 | 1137-1143 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
| T10 | 1202-1208 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
| T11 | 1261-1282 | Glycan | denotes | chondroitin 4-sulfate | https://api.glycosmos.org/wurcs2image/latest/png/binary/G19059PI |
| T12 | 1416-1437 | Glycan | denotes | chondroitin 6-sulfate | https://api.glycosmos.org/wurcs2image/latest/png/binary/G34992DF |
GlyCosmos15-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 1394-1403 | Body_part | denotes | cartilage | http://purl.obolibrary.org/obo/UBERON_0002418|http://purl.obolibrary.org/obo/UBERON_0007844 |
GlyCosmos15-Sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-90 | Sentence | denotes | The effect of penultimate N-acetylgalactosamine 4-sulfate on chondroitin chain elongation. |
| T2 | 91-319 | Sentence | denotes | Previous work has shown that odd-numbered oligosaccharides containing nonreducing terminal, non-sulfated N-acetylgalactosamine (GalNAc) or 6-sulfated GalNAc are excellent acceptors for enzymic addition of glucuronic acid (GlcA). |
| T3 | 320-395 | Sentence | denotes | However, the presence of a 4-sulfated GalNAc group blocks further addition. |
| T4 | 396-615 | Sentence | denotes | We have now used even-numbered oligosaccharides (a mixture of 4-sulfated, 6-sulfated, and non-sulfated) as acceptors of [3H]GalNAc to investigate the effect of sulfate residues on the GalNAc in the penultimate position. |
| T5 | 616-694 | Sentence | denotes | 3H-Labeled oligosaccharides were partially degraded with chondroitin AC lyase. |
| T6 | 695-859 | Sentence | denotes | The labeled trisaccharides, consisting of the added [3H]GalNAc and the nonreducing terminal disaccharides of the oligosaccharide acceptors, were then characterized. |
| T7 | 860-928 | Sentence | denotes | Both non-sulfated and mono-sulfated 3H-trisaccharides were observed. |
| T8 | 929-1073 | Sentence | denotes | However, the 3H-trisaccharides were shown by chromatography with prepared standards to be non-sulfated or to be sulfated only at the 6-position. |
| T9 | 1074-1209 | Sentence | denotes | Thus the oligosaccharides containing a 4-sulfated, penultimate GalNAc at the nonreducing end did not serve as acceptors for [3H]GalNAc. |
| T10 | 1210-1438 | Sentence | denotes | Microsomes from mastocytoma cells, which make only chondroitin 4-sulfate, exhibited the same substrate specificity for exogenous oligosaccharide acceptors as did microsomes from chick cartilage which makes chondroitin 6-sulfate. |
GlyCosmos15-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 61-72 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
| T2 | 673-684 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
| T3 | 1261-1282 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin 4-sulfate | http://www.glycoepitope.jp/epitopes/EP0082 |
| T4 | 1416-1437 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin 6-sulfate | http://www.glycoepitope.jp/epitopes/EP0083 |
GlyCosmos15-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 1226-1237 | Disease | denotes | mastocytoma | MONDO:0003079 |
GlyCosmos15-FMA
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 1210-1220 | Body_part | denotes | Microsomes | FMA:67438 |
| T2 | 1372-1382 | Body_part | denotes | microsomes | FMA:67438 |
| T3 | 1394-1403 | Body_part | denotes | cartilage | FMA:71500 |
GlyCosmos15-MAT
| Id | Subject | Object | Predicate | Lexical cue | mat_id |
|---|---|---|---|---|---|
| T1 | 1394-1403 | Body_part | denotes | cartilage | http://purl.obolibrary.org/obo/MAT_0000189 |
GlyCosmos-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 61-72 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
| T2 | 673-684 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
| T3 | 1261-1282 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin 4-sulfate | http://www.glycoepitope.jp/epitopes/EP0082 |
| T4 | 1416-1437 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin 6-sulfate | http://www.glycoepitope.jp/epitopes/EP0083 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 1394-1403 | Body_part | denotes | cartilage | http://purl.obolibrary.org/obo/UBERON_0002418|http://purl.obolibrary.org/obo/UBERON_0007844 |
Anatomy-MAT
| Id | Subject | Object | Predicate | Lexical cue | mat_id |
|---|---|---|---|---|---|
| T1 | 1394-1403 | Body_part | denotes | cartilage | http://purl.obolibrary.org/obo/MAT_0000189 |