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PubMed:30870429 JSONTXT

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pqqtest_sentence

Id Subject Object Predicate Lexical cue
M_0 564-578 xzyao:4696 denotes rice cultivars
M_1 112-124 xzyao:1553 denotes Oryza sativa
M_2 333-345 xzyao:1553 denotes Oryza sativa
M_3 248-266 xzyao:1447 denotes organic phosphorus
M_4 536-547 WTO:0000011, funRiceGene:359 denotes development
M_5 943-950 xzyao:20768 denotes seed PA
M_6 376-385 xzyao:11179 denotes rice bran
M_7 457-467 xzyao:31817 denotes brown rice
M_8 78-94 xzyao:8351 denotes seed phytic acid
M_9 1519-1534 xzyao:15695 denotes enzyme activity
M_10 1629-1644 xzyao:15695 denotes enzyme activity
M_11 83-94 xzyao:31639 denotes phytic acid
M_12 206-217 xzyao:31639 denotes phytic acid
M_13 78-82 PO:0009010, funRiceGene:180 denotes seed
M_14 943-947 PO:0009010, funRiceGene:180 denotes seed
M_15 730-750 xzyao:30463 denotes chemical mutagenesis
M_16 83-102 xzyao:38486 denotes phytic acid content
M_17 730-738 WTO:0000069 denotes chemical
M_18 256-266 funRiceGene:436 denotes phosphorus
M_19 775-794 xzyao:10648 denotes Genetic segregation
M_20 760-773 xzyao:14 denotes rice cultivar
M_21 999-1013 xzyao:40968 denotes point mutation
M_22 1242-1270 hunflair:NA:Chemical denotes myo-inositol 3-monophosphate
M_23 1326-1329 hunflair:NA:Chemical denotes ATP
M_24 83-94 hunflair:NA:Chemical denotes phytic acid
M_25 206-217 hunflair:NA:Chemical denotes phytic acid
M_26 1097-1100 hunflair:NA:Chemical denotes Thr
M_27 1117-1120 hunflair:NA:Chemical denotes Ile
M_28 683-690 hunflair:NA:Gene denotes Sanggol
M_29 962-969 hunflair:NA:Gene denotes Sanggol
M_30 1648-1655 hunflair:NA:Gene denotes Sanggol
M_31 975-986 hunflair:NA:Gene denotes lpa1-3 gene
M_32 430-450 hunflair:NA:Disease denotes mineral deficiencies
M_33 1388-1394 hunflair:NA:Chemical denotes Thr208
M_34 457-467 hunflair:NA:Species denotes brown rice
M_35 112-124 hunflair:NA:Species denotes Oryza sativa
M_36 333-345 hunflair:NA:Species denotes Oryza sativa
M_37 256-266 hunflair:NA:Chemical denotes phosphorus
M_38 853-859 hunflair:NA:Gene denotes lpa1-3
M_39 975-981 hunflair:NA:Gene denotes lpa1-3
M_40 1609-1615 hunflair:NA:Gene denotes lpa1-3
M_41 754-764 hunflair:NA:Species denotes Ilpum rice
M_42 25-29 hunflair:NA:Gene denotes Lpa1
M_43 1204-1208 hunflair:NA:Gene denotes Lpa1
M_44 1315-1319 hunflair:NA:Gene denotes Lpa1
M_45 1624-1628 hunflair:NA:Gene denotes Lpa1
M_46 184-189 hunflair:NA:Chemical denotes InsP6
M_47 642-648 hunflair:NA:Gene denotes OsLpa1
M_48 868-874 hunflair:NA:Gene denotes OsLpa1
M_49 141-182 hunflair:NA:Chemical denotes myo-inositol-1,2,3,4,5,6-hexakisphosphate
M_50 106-110 hunflair:NA:Species denotes rice
M_51 327-331 hunflair:NA:Species denotes rice
M_52 376-380 hunflair:NA:Species denotes rice
M_53 463-467 hunflair:NA:Species denotes rice
M_54 564-568 hunflair:NA:Species denotes rice
M_55 760-764 hunflair:NA:Species denotes rice
M_56 219-221 hunflair:NA:Gene denotes PA
M_57 351-353 hunflair:NA:Gene denotes PA
M_58 555-557 hunflair:NA:Gene denotes PA
M_59 658-660 hunflair:NA:Gene denotes PA
M_60 698-700 hunflair:NA:Gene denotes PA
M_61 948-950 hunflair:NA:Gene denotes PA
M_62 1678-1680 hunflair:NA:Gene denotes PA
M_63 430-450 pubtator:MESH:C537337:Disease denotes mineral deficiencies
M_64 1122-1127 pubtator:MESH:D000596:Chemical denotes amino
M_65 1097-1100 pubtator:MESH:C055175:Chemical denotes Thr
M_66 1015-1020 pubtator:c.623C>T:DNAMutation denotes C623T
M_67 1105-1115 pubtator:MESH:C043801:Chemical denotes isoleucine
M_68 1326-1329 pubtator:MESH:D000255:Chemical denotes ATP
M_69 1117-1120 pubtator:MESH:C041445:Chemical denotes Ile
M_70 1388-1394 pubtator:MESH:C055175:Chemical denotes Thr208
M_71 112-126 pubtator:4530:Species denotes Oryza sativa L
M_72 333-347 pubtator:4530:Species denotes Oryza sativa L
M_73 1242-1270 pubtator:MESH:C047872:Chemical denotes myo-inositol 3-monophosphate
M_74 559-562 pubtator:MESH:C522988:Chemical denotes LPA
M_75 141-182 pubtator:MESH:C020419:Chemical denotes myo-inositol-1,2,3,4,5,6-hexakisphosphate
M_76 106-110 pubtator:4530:Species denotes rice
M_77 327-331 pubtator:4530:Species denotes rice
M_78 376-380 pubtator:4530:Species denotes rice
M_79 463-467 pubtator:4530:Species denotes rice
M_80 564-568 pubtator:4530:Species denotes rice
M_81 760-764 pubtator:4530:Species denotes rice
M_82 1086-1095 pubtator:MESH:C061951:Chemical denotes threonine
M_83 256-266 pubtator:MESH:D010758:Chemical denotes phosphorus
M_84 83-94 pubtator:MESH:D010833:Chemical denotes phytic acid
M_85 206-217 pubtator:MESH:D010833:Chemical denotes phytic acid

OryzaGP_2021_v2

Id Subject Object Predicate Lexical cue
T1 25-29 http://identifiers.org/oryzabase.gene/6062 denotes Lpa1
T2 559-562 http://identifiers.org/oryzabase.gene/9322 denotes LPA
T3 559-562 http://identifiers.org/oryzabase.gene/14702 denotes LPA
T4 642-648 http://identifiers.org/oryzabase.gene/6062 denotes OsLpa1
T5 853-857 http://identifiers.org/oryzabase.gene/6062 denotes lpa1
T6 868-874 http://identifiers.org/oryzabase.gene/6062 denotes OsLpa1
T7 882-894 http://identifiers.org/rapdb.locus/Os02g0819400 denotes Os02g0819400
T8 975-979 http://identifiers.org/oryzabase.gene/6062 denotes lpa1
T9 1204-1208 http://identifiers.org/oryzabase.gene/6062 denotes Lpa1
T10 1278-1280 http://identifiers.org/oryzabase.gene/23136 denotes P1
T11 1315-1319 http://identifiers.org/oryzabase.gene/6062 denotes Lpa1
T12 1326-1329 http://identifiers.org/oryzabase.gene/639 denotes ATP
T13 1609-1613 http://identifiers.org/oryzabase.gene/6062 denotes lpa1
T14 1624-1628 http://identifiers.org/oryzabase.gene/6062 denotes Lpa1
T75890 25-29 http://identifiers.org/rapdb.locus/Os02g0819400 denotes Lpa1
T19776 559-562 http://identifiers.org/rapdb.locus/Os04g0652400 denotes LPA
T28029 559-562 http://identifiers.org/rapdb.locus/Os03g0737701 denotes LPA
T83646 642-648 http://identifiers.org/rapdb.locus/Os02g0819400 denotes OsLpa1
T38139 853-857 http://identifiers.org/rapdb.locus/Os02g0819400 denotes lpa1
T36930 868-874 http://identifiers.org/rapdb.locus/Os02g0819400 denotes OsLpa1
T5948 882-894 http://identifiers.org/rapdb.locus/Os02g0819400 denotes Os02g0819400
T50467 975-979 http://identifiers.org/rapdb.locus/Os02g0819400 denotes lpa1
T89388 1204-1208 http://identifiers.org/rapdb.locus/Os02g0819400 denotes Lpa1
T20947 1278-1280 http://identifiers.org/rapdb.locus/Os03g0303500 denotes P1
T6520 1315-1319 http://identifiers.org/rapdb.locus/Os02g0819400 denotes Lpa1
T79257 1609-1613 http://identifiers.org/rapdb.locus/Os02g0819400 denotes lpa1
T60211 1624-1628 http://identifiers.org/rapdb.locus/Os02g0819400 denotes Lpa1

21k_plant_trait_mention

Id Subject Object Predicate Lexical cue
M_0 730-738 WTO:0000069 denotes chemical
M_1 536-547 WTO:0000011, funRiceGene:359 denotes development
M_2 943-947 PO:0009010, funRiceGene:180 denotes seed
M_3 256-266 funRiceGene:436 denotes phosphorus
M_4 112-124 hunflair:NA:Species denotes Oryza sativa
M_5 333-345 hunflair:NA:Species denotes Oryza sativa
M_6 184-189 hunflair:NA:Chemical denotes InsP6
M_7 1388-1394 hunflair:NA:Chemical denotes Thr208
M_8 256-266 hunflair:NA:Chemical denotes phosphorus
M_9 1097-1100 hunflair:NA:Chemical denotes Thr
M_10 683-690 hunflair:NA:Gene denotes Sanggol
M_11 962-969 hunflair:NA:Gene denotes Sanggol
M_12 1648-1655 hunflair:NA:Gene denotes Sanggol
M_13 430-450 hunflair:NA:Disease denotes mineral deficiencies
M_14 25-29 hunflair:NA:Gene denotes Lpa1
M_15 1204-1208 hunflair:NA:Gene denotes Lpa1
M_16 1315-1319 hunflair:NA:Gene denotes Lpa1
M_17 1624-1628 hunflair:NA:Gene denotes Lpa1
M_18 754-764 hunflair:NA:Species denotes Ilpum rice
M_19 1117-1120 hunflair:NA:Chemical denotes Ile
M_20 1326-1329 hunflair:NA:Chemical denotes ATP
M_21 457-467 hunflair:NA:Species denotes brown rice
M_22 219-221 hunflair:NA:Gene denotes PA
M_23 351-353 hunflair:NA:Gene denotes PA
M_24 555-557 hunflair:NA:Gene denotes PA
M_25 658-660 hunflair:NA:Gene denotes PA
M_26 698-700 hunflair:NA:Gene denotes PA
M_27 948-950 hunflair:NA:Gene denotes PA
M_28 1678-1680 hunflair:NA:Gene denotes PA
M_29 83-94 hunflair:NA:Chemical denotes phytic acid
M_30 206-217 hunflair:NA:Chemical denotes phytic acid
M_31 642-648 hunflair:NA:Gene denotes OsLpa1
M_32 868-874 hunflair:NA:Gene denotes OsLpa1
M_33 141-182 hunflair:NA:Chemical denotes myo-inositol-1,2,3,4,5,6-hexakisphosphate
M_34 853-859 hunflair:NA:Gene denotes lpa1-3
M_35 975-981 hunflair:NA:Gene denotes lpa1-3
M_36 1609-1615 hunflair:NA:Gene denotes lpa1-3
M_37 1242-1270 hunflair:NA:Chemical denotes myo-inositol 3-monophosphate
M_38 106-110 hunflair:NA:Species denotes rice
M_39 327-331 hunflair:NA:Species denotes rice
M_40 376-380 hunflair:NA:Species denotes rice
M_41 463-467 hunflair:NA:Species denotes rice
M_42 564-568 hunflair:NA:Species denotes rice
M_43 760-764 hunflair:NA:Species denotes rice
M_44 975-986 hunflair:NA:Gene denotes lpa1-3 gene
M_45 1326-1329 pubtator:MESH:D000255:Chemical denotes ATP
M_46 1015-1020 pubtator:c.623C>T:DNAMutation denotes C623T
M_47 1117-1120 pubtator:MESH:C041445:Chemical denotes Ile
M_48 1388-1394 pubtator:MESH:C055175:Chemical denotes Thr208
M_49 1086-1095 pubtator:MESH:C061951:Chemical denotes threonine
M_50 1105-1115 pubtator:MESH:C043801:Chemical denotes isoleucine
M_51 430-450 pubtator:MESH:C537337:Disease denotes mineral deficiencies
M_52 559-562 pubtator:MESH:C522988:Chemical denotes LPA
M_53 1097-1100 pubtator:MESH:C055175:Chemical denotes Thr
M_54 1242-1270 pubtator:MESH:C047872:Chemical denotes myo-inositol 3-monophosphate
M_55 141-182 pubtator:MESH:C020419:Chemical denotes myo-inositol-1,2,3,4,5,6-hexakisphosphate
M_56 83-94 pubtator:MESH:D010833:Chemical denotes phytic acid
M_57 206-217 pubtator:MESH:D010833:Chemical denotes phytic acid
M_58 106-110 pubtator:4530:Species denotes rice
M_59 327-331 pubtator:4530:Species denotes rice
M_60 376-380 pubtator:4530:Species denotes rice
M_61 463-467 pubtator:4530:Species denotes rice
M_62 564-568 pubtator:4530:Species denotes rice
M_63 760-764 pubtator:4530:Species denotes rice
M_64 1122-1127 pubtator:MESH:D000596:Chemical denotes amino
M_65 256-266 pubtator:MESH:D010758:Chemical denotes phosphorus
M_66 112-126 pubtator:4530:Species denotes Oryza sativa L
M_67 333-347 pubtator:4530:Species denotes Oryza sativa L

OryzaGP_2021_FLAIR

Id Subject Object Predicate Lexical cue
M_0 112-124 hunflair:NA:Species denotes Oryza sativa
M_1 333-345 hunflair:NA:Species denotes Oryza sativa
M_2 25-29 hunflair:NA:Gene denotes Lpa1
M_3 1204-1208 hunflair:NA:Gene denotes Lpa1
M_4 1315-1319 hunflair:NA:Gene denotes Lpa1
M_5 1624-1628 hunflair:NA:Gene denotes Lpa1
M_6 754-764 hunflair:NA:Species denotes Ilpum rice
M_7 853-859 hunflair:NA:Gene denotes lpa1-3
M_8 975-981 hunflair:NA:Gene denotes lpa1-3
M_9 1609-1615 hunflair:NA:Gene denotes lpa1-3
M_10 1272-1280 hunflair:NA:Chemical denotes Ins(3)P1
M_11 141-182 hunflair:NA:Chemical denotes myo-inositol-1,2,3,4,5,6-hexakisphosphate
M_12 219-221 hunflair:NA:Gene denotes PA
M_13 351-353 hunflair:NA:Gene denotes PA
M_14 555-557 hunflair:NA:Gene denotes PA
M_15 658-660 hunflair:NA:Gene denotes PA
M_16 698-700 hunflair:NA:Gene denotes PA
M_17 948-950 hunflair:NA:Gene denotes PA
M_18 1678-1680 hunflair:NA:Gene denotes PA
M_19 457-467 hunflair:NA:Species denotes brown rice
M_20 1388-1394 hunflair:NA:Chemical denotes Thr208
M_21 1242-1270 hunflair:NA:Chemical denotes myo-inositol 3-monophosphate
M_22 430-450 hunflair:NA:Disease denotes mineral deficiencies
M_23 256-266 hunflair:NA:Chemical denotes phosphorus
M_24 106-110 hunflair:NA:Species denotes rice
M_25 327-331 hunflair:NA:Species denotes rice
M_26 376-380 hunflair:NA:Species denotes rice
M_27 463-467 hunflair:NA:Species denotes rice
M_28 564-568 hunflair:NA:Species denotes rice
M_29 760-764 hunflair:NA:Species denotes rice
M_30 1097-1100 hunflair:NA:Chemical denotes Thr
M_31 642-648 hunflair:NA:Gene denotes OsLpa1
M_32 868-874 hunflair:NA:Gene denotes OsLpa1
M_33 184-189 hunflair:NA:Chemical denotes InsP6
M_34 1326-1329 hunflair:NA:Chemical denotes ATP
M_35 683-690 hunflair:NA:Gene denotes Sanggol
M_36 962-969 hunflair:NA:Gene denotes Sanggol
M_37 1648-1655 hunflair:NA:Gene denotes Sanggol
M_38 975-986 hunflair:NA:Gene denotes lpa1-3 gene
M_39 1117-1120 hunflair:NA:Chemical denotes Ile
M_40 83-94 hunflair:NA:Chemical denotes phytic acid
M_41 206-217 hunflair:NA:Chemical denotes phytic acid

OryzaGP_2021

Id Subject Object Predicate Lexical cue
T1 25-29 http://identifiers.org/oryzabase.gene/6062 denotes Lpa1
T2 559-562 http://identifiers.org/oryzabase.gene/9322 denotes LPA
T3 559-562 http://identifiers.org/oryzabase.gene/14702 denotes LPA
T4 642-648 http://identifiers.org/oryzabase.gene/6062 denotes OsLpa1
T5 853-857 http://identifiers.org/oryzabase.gene/6062 denotes lpa1
T6 853-857 http://identifiers.org/oryzabase.gene/13161 denotes lpa1
T7 868-874 http://identifiers.org/oryzabase.gene/6062 denotes OsLpa1
T8 882-894 http://identifiers.org/rapdb.locus/Os02g0819400 denotes Os02g0819400
T9 975-979 http://identifiers.org/oryzabase.gene/6062 denotes lpa1
T10 975-979 http://identifiers.org/oryzabase.gene/13161 denotes lpa1
T11 1204-1208 http://identifiers.org/oryzabase.gene/6062 denotes Lpa1
T12 1278-1280 http://identifiers.org/oryzabase.gene/23136 denotes P1
T13 1315-1319 http://identifiers.org/oryzabase.gene/6062 denotes Lpa1
T14 1326-1329 http://identifiers.org/oryzabase.gene/639 denotes ATP
T15 1609-1613 http://identifiers.org/oryzabase.gene/6062 denotes lpa1
T16 1609-1613 http://identifiers.org/oryzabase.gene/13161 denotes lpa1
T17 1624-1628 http://identifiers.org/oryzabase.gene/6062 denotes Lpa1
T64912 25-29 http://identifiers.org/ricegap/LOC_Os02g57400 denotes Lpa1
T79349 559-562 http://identifiers.org/ricegap/LOC_Os04g55800 denotes LPA
T94370 559-562 http://identifiers.org/ricegap/LOC_Os03g52760 denotes LPA
T23603 642-648 http://identifiers.org/ricegap/LOC_Os02g57400 denotes OsLpa1
T47956 853-857 http://identifiers.org/ricegap/LOC_Os03g13400 denotes lpa1
T9752 853-857 http://identifiers.org/ricegap/LOC_Os02g57400 denotes lpa1
T17441 868-874 http://identifiers.org/ricegap/LOC_Os02g57400 denotes OsLpa1
T39540 975-979 http://identifiers.org/ricegap/LOC_Os03g13400 denotes lpa1
T54244 975-979 http://identifiers.org/ricegap/LOC_Os02g57400 denotes lpa1
T43922 1204-1208 http://identifiers.org/ricegap/LOC_Os02g57400 denotes Lpa1
T26958 1278-1280 http://identifiers.org/ricegap/LOC_Os03g19120 denotes P1
T39709 1315-1319 http://identifiers.org/ricegap/LOC_Os02g57400 denotes Lpa1
T3898 1609-1613 http://identifiers.org/ricegap/LOC_Os03g13400 denotes lpa1
T26788 1609-1613 http://identifiers.org/ricegap/LOC_Os02g57400 denotes lpa1
T49967 1624-1628 http://identifiers.org/ricegap/LOC_Os02g57400 denotes Lpa1
T92830 25-29 http://identifiers.org/rapdb.locus/Os02g0819400 denotes Lpa1
T67321 559-562 http://identifiers.org/rapdb.locus/Os04g0652400 denotes LPA
T29615 559-562 http://identifiers.org/rapdb.locus/Os03g0737701 denotes LPA
T30085 642-648 http://identifiers.org/rapdb.locus/Os02g0819400 denotes OsLpa1
T46343 853-857 http://identifiers.org/rapdb.locus/Os03g0237250 denotes lpa1
T64810 853-857 http://identifiers.org/rapdb.locus/Os02g0819400 denotes lpa1
T82473 868-874 http://identifiers.org/rapdb.locus/Os02g0819400 denotes OsLpa1
T49671 975-979 http://identifiers.org/rapdb.locus/Os03g0237250 denotes lpa1
T27875 975-979 http://identifiers.org/rapdb.locus/Os02g0819400 denotes lpa1
T83059 1204-1208 http://identifiers.org/rapdb.locus/Os02g0819400 denotes Lpa1
T12186 1278-1280 http://identifiers.org/rapdb.locus/Os03g0303500 denotes P1
T6000 1315-1319 http://identifiers.org/rapdb.locus/Os02g0819400 denotes Lpa1
T87189 1609-1613 http://identifiers.org/rapdb.locus/Os03g0237250 denotes lpa1
T36130 1609-1613 http://identifiers.org/rapdb.locus/Os02g0819400 denotes lpa1
T56611 1624-1628 http://identifiers.org/rapdb.locus/Os02g0819400 denotes Lpa1
T92162 25-29 http://identifiers.org/uniprot/B5SVV5 denotes Lpa1
T68039 25-29 http://identifiers.org/uniprot/B5SVV4 denotes Lpa1
T81387 25-29 http://identifiers.org/uniprot/B5SVV3 denotes Lpa1
T91580 559-562 http://identifiers.org/uniprot/Q84R36 denotes LPA
T53100 559-562 http://identifiers.org/uniprot/Q0J9H5 denotes LPA
T8552 559-562 http://identifiers.org/uniprot/Q00RP3 denotes LPA
T94293 642-648 http://identifiers.org/uniprot/B5SVV5 denotes OsLpa1
T15306 642-648 http://identifiers.org/uniprot/B5SVV4 denotes OsLpa1
T73469 642-648 http://identifiers.org/uniprot/B5SVV3 denotes OsLpa1
T84523 868-874 http://identifiers.org/uniprot/B5SVV5 denotes OsLpa1
T86449 868-874 http://identifiers.org/uniprot/B5SVV4 denotes OsLpa1
T23446 868-874 http://identifiers.org/uniprot/B5SVV3 denotes OsLpa1
T50980 1204-1208 http://identifiers.org/uniprot/B5SVV5 denotes Lpa1
T14960 1204-1208 http://identifiers.org/uniprot/B5SVV4 denotes Lpa1
T40911 1204-1208 http://identifiers.org/uniprot/B5SVV3 denotes Lpa1
T45250 1278-1280 http://identifiers.org/uniprot/Q8S3X7 denotes P1
T92277 1278-1280 http://identifiers.org/uniprot/Q10MM2 denotes P1
T18 1315-1319 http://identifiers.org/uniprot/B5SVV5 denotes Lpa1
T19 1315-1319 http://identifiers.org/uniprot/B5SVV4 denotes Lpa1
T20 1315-1319 http://identifiers.org/uniprot/B5SVV3 denotes Lpa1
T21 1624-1628 http://identifiers.org/uniprot/B5SVV5 denotes Lpa1
T22 1624-1628 http://identifiers.org/uniprot/B5SVV4 denotes Lpa1
T23 1624-1628 http://identifiers.org/uniprot/B5SVV3 denotes Lpa1
M_0 112-124 hunflair:NA:Species denotes Oryza sativa
M_1 333-345 hunflair:NA:Species denotes Oryza sativa
M_2 25-29 hunflair:NA:Gene denotes Lpa1
M_3 1204-1208 hunflair:NA:Gene denotes Lpa1
M_4 1315-1319 hunflair:NA:Gene denotes Lpa1
M_5 1624-1628 hunflair:NA:Gene denotes Lpa1
M_6 754-764 hunflair:NA:Species denotes Ilpum rice
M_7 853-859 hunflair:NA:Gene denotes lpa1-3
M_8 975-981 hunflair:NA:Gene denotes lpa1-3
M_9 1609-1615 hunflair:NA:Gene denotes lpa1-3
M_10 1272-1280 hunflair:NA:Chemical denotes Ins(3)P1
M_11 141-182 hunflair:NA:Chemical denotes myo-inositol-1,2,3,4,5,6-hexakisphosphate
M_12 219-221 hunflair:NA:Gene denotes PA
M_13 351-353 hunflair:NA:Gene denotes PA
M_14 555-557 hunflair:NA:Gene denotes PA
M_15 658-660 hunflair:NA:Gene denotes PA
M_16 698-700 hunflair:NA:Gene denotes PA
M_17 948-950 hunflair:NA:Gene denotes PA
M_18 1678-1680 hunflair:NA:Gene denotes PA
M_19 457-467 hunflair:NA:Species denotes brown rice
M_20 1388-1394 hunflair:NA:Chemical denotes Thr208
M_21 1242-1270 hunflair:NA:Chemical denotes myo-inositol 3-monophosphate
M_22 430-450 hunflair:NA:Disease denotes mineral deficiencies
M_23 256-266 hunflair:NA:Chemical denotes phosphorus
M_24 106-110 hunflair:NA:Species denotes rice
M_25 327-331 hunflair:NA:Species denotes rice
M_26 376-380 hunflair:NA:Species denotes rice
M_27 463-467 hunflair:NA:Species denotes rice
M_28 564-568 hunflair:NA:Species denotes rice
M_29 760-764 hunflair:NA:Species denotes rice
M_30 1097-1100 hunflair:NA:Chemical denotes Thr
M_31 642-648 hunflair:NA:Gene denotes OsLpa1
M_32 868-874 hunflair:NA:Gene denotes OsLpa1
M_33 184-189 hunflair:NA:Chemical denotes InsP6
M_34 1326-1329 hunflair:NA:Chemical denotes ATP
M_35 683-690 hunflair:NA:Gene denotes Sanggol
M_36 962-969 hunflair:NA:Gene denotes Sanggol
M_37 1648-1655 hunflair:NA:Gene denotes Sanggol
M_38 975-986 hunflair:NA:Gene denotes lpa1-3 gene
M_39 1117-1120 hunflair:NA:Chemical denotes Ile
M_40 83-94 hunflair:NA:Chemical denotes phytic acid
M_41 206-217 hunflair:NA:Chemical denotes phytic acid

Oryza_sentences

Id Subject Object Predicate Lexical cue
T1 0-129 Sentence denotes Novel allelic variant of Lpa1 gene associated with a significant reduction in seed phytic acid content in rice (Oryza sativa L.).
T2 130-323 Sentence denotes In plants, myo-inositol-1,2,3,4,5,6-hexakisphosphate (InsP6), also known as phytic acid (PA), is a major component of organic phosphorus (P), and accounts for up to 85% of the total P in seeds.
T3 324-478 Sentence denotes In rice (Oryza sativa L.), PA mainly accumulates in rice bran, and chelates mineral cations, resulting in mineral deficiencies among brown rice consumers.
T4 479-579 Sentence denotes Therefore, considerable efforts have been focused on the development of low PA (LPA) rice cultivars.
T5 580-774 Sentence denotes In this study, we performed genetic and molecular analyses of OsLpa1, a major PA biosynthesis gene, in Sanggol, a low PA mutant variety developed via chemical mutagenesis of Ilpum rice cultivar.
T6 775-1173 Sentence denotes Genetic segregation and sequencing analyses revealed that a recessive allele, lpa1-3, at the OsLpa1 locus (Os02g0819400) was responsible for a significant reduction in seed PA content in Sanggol. The lpa1-3 gene harboured a point mutation (C623T) in the fourth exon of the predicted coding region, resulting in threonine (Thr) to isoleucine (Ile) amino acidsubstitution at position 208 (Thr208Ile).
T7 1174-1358 Sentence denotes Three-dimensional analysis of Lpa1 protein structure indicated that myo-inositol 3-monophosphate [Ins(3)P1] could bind to the active site of Lpa1, with ATP as a cofactor for catalysis.
T8 1359-1555 Sentence denotes Furthermore, the presence of Thr208 in the loop adjacent to the entry site of the binding pocket suggests that Thr208Ile substitution is involved in regulating enzyme activity via phosphorylation.
T9 1556-1694 Sentence denotes Therefore, we propose that Thr208Ile substitution in lpa1-3 reduces Lpa1 enzyme activity in Sanggol, resulting in reduced PA biosynthesis.