PubMed:30836660 / 558-812
Annnotations
Inflammaging
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T5 | 0-254 | Sentence | denotes | In this study, we establish the unilateral ureteric obstruction (UUO) or folic acid (FA)-induced mice renal interstitial fibrosis in vivo and the transforming growth factor (TGF)-β1-stimulated human proximal tubular epithelial cell (HK-2) model in vitro. |
| T5 | 0-254 | Sentence | denotes | In this study, we establish the unilateral ureteric obstruction (UUO) or folic acid (FA)-induced mice renal interstitial fibrosis in vivo and the transforming growth factor (TGF)-β1-stimulated human proximal tubular epithelial cell (HK-2) model in vitro. |
LitCoin-entities-OrganismTaxon-PD
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T2 | 97-101 | OrganismTaxon | denotes | mice | NCBItxid:10095|NCBItxid:10088 |
| T4 | 193-198 | OrganismTaxon | denotes | human | NCBItxid:9606 |
LitCoin-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T5 | 0-254 | Sentence | denotes | In this study, we establish the unilateral ureteric obstruction (UUO) or folic acid (FA)-induced mice renal interstitial fibrosis in vivo and the transforming growth factor (TGF)-β1-stimulated human proximal tubular epithelial cell (HK-2) model in vitro. |
LitCoin-entities
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| 13584 | 32-63 | DiseaseOrPhenotypicFeature | denotes | unilateral ureteric obstruction | MESH:D014517 |
| 13585 | 65-68 | DiseaseOrPhenotypicFeature | denotes | UUO | MESH:D014517 |
| 13586 | 73-83 | ChemicalEntity | denotes | folic acid | MESH:D005492 |
| 13587 | 85-87 | ChemicalEntity | denotes | FA | MESH:D005492 |
| 13588 | 97-101 | OrganismTaxon | denotes | mice | NCBITaxon:10090 |
| 13589 | 102-129 | DiseaseOrPhenotypicFeature | denotes | renal interstitial fibrosis | MESH:D007674 |
| 13590 | 146-181 | GeneOrGeneProduct | denotes | transforming growth factor (TGF)-β1 | NCBIGene:21803 |
| 13591 | 193-198 | OrganismTaxon | denotes | human | NCBITaxon:9606 |
| 13592 | 233-237 | CellLine | denotes | HK-2 | NCBITaxon:9606 |
LitCoin_Mondo
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T2 | 43-63 | DiseaseOrPhenotypicFeature | denotes | ureteric obstruction | 0003329 |
LitCoin-GeneOrGeneProduct-v0
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T9 | 79-83 | GeneOrGeneProduct | denotes | acid |
| T10 | 89-96 | GeneOrGeneProduct | denotes | induced |
| T11 | 97-101 | GeneOrGeneProduct | denotes | mice |
| T12 | 159-172 | GeneOrGeneProduct | denotes | growth factor |
| T13 | 227-231 | GeneOrGeneProduct | denotes | cell |
| T14 | 233-237 | GeneOrGeneProduct | denotes | HK-2 |
LitCoin-GeneOrGeneProduct-v2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3 | 79-83 | GeneOrGeneProduct | denotes | acid |
| T4 | 159-172 | GeneOrGeneProduct | denotes | growth factor |
| T5 | 227-231 | GeneOrGeneProduct | denotes | cell |
| T6 | 233-237 | GeneOrGeneProduct | denotes | HK-2 |
LitCoin-Disease-MeSH
| Id | Subject | Object | Predicate | Lexical cue | originalLabel |
|---|---|---|---|---|---|
| T5 | 43-63 | DiseaseOrPhenotypicFeature | denotes | ureteric obstruction | D014517 |
| T6 | 65-68 | DiseaseOrPhenotypicFeature | denotes | UUO | D014517 |
| T7 | 121-129 | DiseaseOrPhenotypicFeature | denotes | fibrosis | D005355 |
LitCoin-GeneOrGeneProduct-v3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3 | 159-172 | GeneOrGeneProduct | denotes | growth factor |
| T4 | 174-177 | GeneOrGeneProduct | denotes | TGF |
LitCoin_Mondo_095
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T2 | 85-87 | DiseaseOrPhenotypicFeature | denotes | FA | 0100339|0002056 |
LitCoin-MeSH-Disease-2
| Id | Subject | Object | Predicate | Lexical cue | ID: |
|---|---|---|---|---|---|
| T6 | 43-63 | DiseaseOrPhenotypicFeature | denotes | ureteric obstruction | D014517 |
| T7 | 65-68 | DiseaseOrPhenotypicFeature | denotes | UUO | D014517 |
| T8 | 121-129 | DiseaseOrPhenotypicFeature | denotes | fibrosis | D005355 |
LitCoin_CellLine
| Id | Subject | Object | Predicate | Lexical cue | cellosaurus_accession_id |
|---|---|---|---|---|---|
| T1 | 233-237 | CellLine | denotes | HK-2 | AddedByYayamamo |
LitCoin-MONDO_bioort2019
| Id | Subject | Object | Predicate | Lexical cue | #label |
|---|---|---|---|---|---|
| T5 | 43-63 | DiseaseOrPhenotypicFeature | denotes | ureteric obstruction | D014517 |
| T6 | 65-68 | DiseaseOrPhenotypicFeature | denotes | UUO | D014517 |
| T7 | 121-129 | DiseaseOrPhenotypicFeature | denotes | fibrosis | D005355 |
LitCoin-NCBITaxon-2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2 | 97-101 | OrganismTaxon | denotes | mice |
| T3 | 193-198 | OrganismTaxon | denotes | human |
LitCoin-Chemical-MeSH-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | ID: |
|---|---|---|---|---|---|
| T6 | 73-83 | ChemicalEntity | denotes | folic acid | D005492|http://purl.obolibrary.org/obo/CHEBI_27470 |
| T8 | 85-87 | ChemicalEntity | denotes | FA | D005492 |
LitCoin-training-merged
| Id | Subject | Object | Predicate | Lexical cue | #label | ID: | cellosaurus_accession_id |
|---|---|---|---|---|---|---|---|
| T1 | 233-237 | CellLine | denotes | HK-2 | AddedByYayamamo | ||
| T8 | 85-87 | ChemicalEntity | denotes | FA | D005492 | ||
| T6 | 73-83 | ChemicalEntity | denotes | folic acid | http://purl.obolibrary.org/obo/CHEBI_27470|D005492 | ||
| T49127 | 174-177 | GeneOrGeneProduct | denotes | TGF | |||
| T2676 | 159-172 | GeneOrGeneProduct | denotes | growth factor | |||
| T59604 | 121-129 | DiseaseOrPhenotypicFeature | denotes | fibrosis | D005355 | ||
| T66543 | 65-68 | DiseaseOrPhenotypicFeature | denotes | UUO | D014517 | ||
| T20591 | 43-63 | DiseaseOrPhenotypicFeature | denotes | ureteric obstruction | D014517 | ||
| T77668 | 193-198 | OrganismTaxon | denotes | human | |||
| T93724 | 97-101 | OrganismTaxon | denotes | mice |