PubMed:29587633 / 189-1159 JSONTXT

{"project":"GoldHamster","denotations":[{"id":"T11","span":{"begin":40,"end":57},"obj":"D004272"},{"id":"T12","span":{"begin":40,"end":57},"obj":"SO:0001032"},{"id":"T10","span":{"begin":40,"end":57},"obj":"GO:0000262"},{"id":"T17","span":{"begin":61,"end":69},"obj":"D049872"},{"id":"T18","span":{"begin":275,"end":292},"obj":"GO:0007530"},{"id":"T19","span":{"begin":333,"end":340},"obj":"D049872"},{"id":"T20","span":{"begin":388,"end":408},"obj":"GO:0000262"},{"id":"T21","span":{"begin":402,"end":408},"obj":"SO:0001026"},{"id":"T22","span":{"begin":431,"end":435},"obj":"PR:000013784"},{"id":"T23","span":{"begin":431,"end":435},"obj":"Q9NTZ6"},{"id":"T24","span":{"begin":431,"end":435},"obj":"Q8SQ27"},{"id":"T25","span":{"begin":431,"end":435},"obj":"Q8R4X3"},{"id":"T26","span":{"begin":436,"end":442},"obj":"D049872"},{"id":"T29","span":{"begin":444,"end":459},"obj":"47528"},{"id":"T30","span":{"begin":503,"end":523},"obj":"GO:0000262"},{"id":"T31","span":{"begin":517,"end":523},"obj":"SO:0001026"},{"id":"T32","span":{"begin":542,"end":546},"obj":"D004372"},{"id":"T33","span":{"begin":542,"end":546},"obj":"8839"},{"id":"T34","span":{"begin":547,"end":553},"obj":"D049872"},{"id":"T37","span":{"begin":555,"end":571},"obj":"143294"},{"id":"T38","span":{"begin":606,"end":614},"obj":"CHEBI:36080"},{"id":"T39","span":{"begin":639,"end":646},"obj":"D049872"},{"id":"T40","span":{"begin":757,"end":770},"obj":"SO:0001077"},{"id":"T41","span":{"begin":757,"end":770},"obj":"GO:0044214"},{"id":"T42","span":{"begin":757,"end":770},"obj":"GO:0016021"},{"id":"T43","span":{"begin":780,"end":783},"obj":"CHEBI:85361"},{"id":"T44","span":{"begin":786,"end":792},"obj":"SO:0000725"},{"id":"T45","span":{"begin":786,"end":792},"obj":"SO:0000418"},{"id":"T46","span":{"begin":786,"end":801},"obj":"D021382"},{"id":"T55","span":{"begin":803,"end":806},"obj":"1799649"},{"id":"T50","span":{"begin":803,"end":806},"obj":"PR:P49903"},{"id":"T54","span":{"begin":803,"end":806},"obj":"PR:000014643"},{"id":"T57","span":{"begin":803,"end":806},"obj":"PR:Q8S948"},{"id":"T53","span":{"begin":803,"end":806},"obj":"D016750"},{"id":"T56","span":{"begin":803,"end":806},"obj":"C535540"},{"id":"T52","span":{"begin":803,"end":806},"obj":"GO:0046524"},{"id":"T51","span":{"begin":803,"end":806},"obj":"CVCL_R927"},{"id":"T58","span":{"begin":809,"end":815},"obj":"SO:0000725"},{"id":"T59","span":{"begin":809,"end":815},"obj":"SO:0000418"},{"id":"T60","span":{"begin":832,"end":835},"obj":"O81191"},{"id":"T61","span":{"begin":832,"end":835},"obj":"D000168"},{"id":"T62","span":{"begin":832,"end":835},"obj":"GO:0004776"},{"id":"T63","span":{"begin":850,"end":862},"obj":"GO:0051179"},{"id":"T64","span":{"begin":914,"end":917},"obj":"CHEBI:85361"},{"id":"T65","span":{"begin":954,"end":960},"obj":"D049872"}],"text":"Doubly uniparental inheritance (DUI) of mitochondrial DNA in bivalves is a fascinating exception to strictly maternal inheritance as practiced by all other animals. Recent work on DUI suggests that there may be unique regions of the mitochondrial genomes that play a role in sex determination and/or sexual development in freshwater mussels (order Unionoida). In this study, one complete mitochondrial genome of the hermaphroditic swan mussel, Anodonta cygnea, is sequenced and compared to the complete mitochondrial genome of the gonochoric duck mussel, Anodonta anatina. An in silico assessment of novel proteins found within freshwater bivalve species (known as F-, H-, and M-open reading frames or ORFs) is conducted, with special attention to putative transmembrane domains (TMs), signal peptides (SPs), signal cleavage sites (SCS), subcellular localization, and potential control regions. Characteristics of TMs are also examined across freshwater mussel lineages."}

{"project":"PubMed_Structured_Abstracts","denotations":[{"id":"T1","span":{"begin":0,"end":970},"obj":"BACKGROUND"}],"text":"Doubly uniparental inheritance (DUI) of mitochondrial DNA in bivalves is a fascinating exception to strictly maternal inheritance as practiced by all other animals. Recent work on DUI suggests that there may be unique regions of the mitochondrial genomes that play a role in sex determination and/or sexual development in freshwater mussels (order Unionoida). In this study, one complete mitochondrial genome of the hermaphroditic swan mussel, Anodonta cygnea, is sequenced and compared to the complete mitochondrial genome of the gonochoric duck mussel, Anodonta anatina. An in silico assessment of novel proteins found within freshwater bivalve species (known as F-, H-, and M-open reading frames or ORFs) is conducted, with special attention to putative transmembrane domains (TMs), signal peptides (SPs), signal cleavage sites (SCS), subcellular localization, and potential control regions. Characteristics of TMs are also examined across freshwater mussel lineages."}

{"project":"Goldhamster2_Cellosaurus","denotations":[{"id":"T1","span":{"begin":73,"end":74},"obj":"CVCL_6479|Finite_cell_line|Mus musculus"},{"id":"T2","span":{"begin":204,"end":207},"obj":"CVCL_E773|Transformed_cell_line|Homo sapiens"},{"id":"T3","span":{"begin":265,"end":266},"obj":"CVCL_6479|Finite_cell_line|Mus musculus"},{"id":"T4","span":{"begin":375,"end":378},"obj":"CVCL_Z424|Spontaneously_immortalized_cell_line|Ostrinia nubilalis"},{"id":"T5","span":{"begin":573,"end":575},"obj":"CVCL_8754|Cancer_cell_line|Homo sapiens"},{"id":"T6","span":{"begin":573,"end":575},"obj":"CVCL_H241|Cancer_cell_line|Homo sapiens"},{"id":"T7","span":{"begin":803,"end":806},"obj":"CVCL_4920|Spontaneously_immortalized_cell_line|Sus scrofa"},{"id":"T8","span":{"begin":803,"end":806},"obj":"CVCL_R927|Spontaneously_immortalized_cell_line|Lateolabrax japonicus"}],"text":"Doubly uniparental inheritance (DUI) of mitochondrial DNA in bivalves is a fascinating exception to strictly maternal inheritance as practiced by all other animals. Recent work on DUI suggests that there may be unique regions of the mitochondrial genomes that play a role in sex determination and/or sexual development in freshwater mussels (order Unionoida). In this study, one complete mitochondrial genome of the hermaphroditic swan mussel, Anodonta cygnea, is sequenced and compared to the complete mitochondrial genome of the gonochoric duck mussel, Anodonta anatina. An in silico assessment of novel proteins found within freshwater bivalve species (known as F-, H-, and M-open reading frames or ORFs) is conducted, with special attention to putative transmembrane domains (TMs), signal peptides (SPs), signal cleavage sites (SCS), subcellular localization, and potential control regions. Characteristics of TMs are also examined across freshwater mussel lineages."}