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PubMed:29546444 JSONTXT

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pqqtest_sentence

Id Subject Object Predicate Lexical cue
T63076 874-886 TO:0002759, funRiceGene:341, xzyao:28134 denotes Grain number
T56650 1108-1120 TO:0002759, funRiceGene:341, xzyao:28134 denotes grain number
T17448 1257-1269 TO:0002759, funRiceGene:341, xzyao:28134 denotes grain number
T50904 992-1005 xzyao:31116 denotes restorer line
T90623 38-45 funRiceGene:434 denotes panicle
T20161 153-160 funRiceGene:434 denotes panicle
T60653 332-339 funRiceGene:434 denotes panicle
T81552 390-397 funRiceGene:434 denotes panicle
T85517 488-495 funRiceGene:434 denotes panicle
T90844 759-766 funRiceGene:434 denotes panicle
T30879 949-956 funRiceGene:434 denotes panicle
T6083 1553-1560 funRiceGene:434 denotes panicle
T57082 15-28 xzyao:41796 denotes genetic basis
T85564 248-261 xzyao:41796 denotes genetic basis
T31258 949-966 xzyao:18329 denotes panicle phenotype
T61928 441-446 funRiceGene:377 denotes yield
T66661 571-576 funRiceGene:377 denotes yield
T415 1613-1618 funRiceGene:377 denotes yield
T56160 373-378 funRiceGene:91 denotes grain
T53140 874-879 funRiceGene:91 denotes Grain
T79052 901-906 funRiceGene:91 denotes Grain
T13181 1108-1113 funRiceGene:91 denotes grain
T13133 1151-1156 funRiceGene:91 denotes grain
M_23 1257-1262 funRiceGene:91 denotes grain
M_24 1352-1366 xzyao:11492 denotes rare haplotype
M_25 675-690 WTO:0000110 denotes solar radiation
M_26 1098-1120 xzyao:20490 denotes increased grain number
M_27 901-911 TO:0000397, funRiceGene:32, xzyao:29368 denotes Grain Size
M_28 1151-1161 TO:0000397, funRiceGene:32, xzyao:29368 denotes grain size
M_29 1274-1286 xzyao:28178 denotes large grains
M_30 957-966 WTO:0000005 denotes phenotype
M_31 619-643 xzyao:26937 denotes environmental conditions
M_32 1252-1269 xzyao:8959 denotes high grain number
M_33 340-345 WTO:0000006 denotes trait
M_34 767-772 WTO:0000006 denotes trait
M_35 46-57 xzyao:24443 denotes hybrid rice
M_36 161-172 xzyao:24443 denotes hybrid rice
M_37 501-512 xzyao:24443 denotes hybrid rice
M_38 776-787 xzyao:24443 denotes hybrid rice
M_39 980-991 xzyao:24443 denotes hybrid rice
M_40 373-385 TO:0000919, funRiceGene:451, xzyao:9073 denotes grain weight
M_41 304-312 funRiceGene:189 denotes breeding
M_42 452-460 funRiceGene:189 denotes breeding
M_43 577-585 funRiceGene:189 denotes breeding
M_44 1458-1466 funRiceGene:189 denotes breeding
M_45 1624-1632 funRiceGene:189 denotes breeding
M_46 210-213 hunflair:NA:Gene denotes gs3
M_47 1128-1131 hunflair:NA:Gene denotes gs3
M_48 108-117 hunflair:NA:CellLine denotes Shuhui498
M_49 1006-1015 hunflair:NA:CellLine denotes Shuhui498
M_50 68-72 hunflair:NA:Gene denotes Gn1a
M_51 891-895 hunflair:NA:Gene denotes Gn1a
M_52 196-200 hunflair:NA:Gene denotes gn1a
M_53 1033-1037 hunflair:NA:Gene denotes gn1a
M_54 1331-1339 hunflair:NA:Gene denotes gn1aR498
M_55 53-57 hunflair:NA:Species denotes rice
M_56 168-172 hunflair:NA:Species denotes rice
M_57 447-451 hunflair:NA:Species denotes rice
M_58 508-512 hunflair:NA:Species denotes rice
M_59 783-787 hunflair:NA:Species denotes rice
M_60 987-991 hunflair:NA:Species denotes rice
M_61 1566-1570 hunflair:NA:Species denotes rice
M_62 1619-1623 hunflair:NA:Species denotes rice
M_63 77-80 hunflair:NA:Gene denotes GS3
M_64 915-918 hunflair:NA:Gene denotes GS3
M_65 53-57 pubtator:4530:Species denotes rice
M_66 168-172 pubtator:4530:Species denotes rice
M_67 447-451 pubtator:4530:Species denotes rice
M_68 508-512 pubtator:4530:Species denotes rice
M_69 783-787 pubtator:4530:Species denotes rice
M_70 987-991 pubtator:4530:Species denotes rice
M_71 1566-1570 pubtator:4530:Species denotes rice
M_72 1619-1623 pubtator:4530:Species denotes rice
M_73 665-690 pubtator:MESH:D011832:Disease denotes deficient solar radiation
M_0 15-28 cand:PECO:0007351-genetic background denotes genetic basis
M_1 15-28 cand:PECO:0007125-genetic environment denotes genetic basis
M_2 15-28 cand:TO:0000239-plant genetic trait unknown denotes genetic basis
M_3 15-28 cand:TO:0000256-genetic trait denotes genetic basis
M_4 15-28 cand:TO:0000341-plant genetic trait denotes genetic basis
M_5 15-28 cand:PECO:0007381-nuclear genetic background denotes genetic basis
M_6 15-28 cand:TO:0000002-epigenetic trait denotes genetic basis
M_7 15-28 cand:PO:0025147-sepal base denotes genetic basis
M_8 15-28 cand:PO:0025029-shoot axis denotes genetic basis
M_9 15-28 cand:PO:0025146-petal base denotes genetic basis
M_10 1288-1307 cand:PO:0020086-multiple fruit denotes Clustering analysis
M_11 1288-1307 cand:TO:0000845-collective phyllome structure morphology trait denotes Clustering analysis
M_12 1288-1307 cand:TO:0000836-multi-tissue plant structure morphology trait denotes Clustering analysis
M_13 1288-1307 cand:TO:0000839-plant structure morphology trait denotes Clustering analysis
M_14 1288-1307 cand:TO:0000489-carbohydrate composition related trait denotes Clustering analysis
M_15 1288-1307 cand:PO:0025578-collective phyllome structure development stage denotes Clustering analysis
M_16 1288-1307 cand:PO:0007616-flowering stage denotes Clustering analysis
M_17 1288-1307 cand:PO:0009040-sterile lemma denotes Clustering analysis
M_18 1288-1307 cand:TO:0000329-tillering ability denotes Clustering analysis
M_19 1288-1307 cand:WTO:0000381-Blumeria graminis denotes Clustering analysis
M_20 1288-1307 cand:funRiceGene:19-protein kinase denotes Clustering analysis
M_21 68-72 GeneID:RAPID:Os01g0197700MSUID:LOC_Os01g10110GraID:GR:0020051 denotes Gn1a
M_22 1331-1339 GeneID:NA denotes gn1aR498

21k_plant_trait_mention

Id Subject Object Predicate Lexical cue
M_0 767-772 WTO:0000006 denotes trait
M_1 304-312 funRiceGene:189 denotes breeding
M_2 452-460 funRiceGene:189 denotes breeding
M_3 577-585 funRiceGene:189 denotes breeding
M_4 1458-1466 funRiceGene:189 denotes breeding
M_5 957-966 WTO:0000005 denotes phenotype
M_6 153-160 funRiceGene:434 denotes panicle
M_7 332-339 funRiceGene:434 denotes panicle
M_8 759-766 funRiceGene:434 denotes panicle
M_9 949-956 funRiceGene:434 denotes panicle
M_10 647-660 xzyao:9731 denotes high humidity
M_11 373-378 funRiceGene:91 denotes grain
M_12 874-879 funRiceGene:91 denotes Grain
M_13 901-906 funRiceGene:91 denotes Grain
M_14 1108-1113 funRiceGene:91 denotes grain
M_15 1151-1156 funRiceGene:91 denotes grain
M_16 1257-1262 funRiceGene:91 denotes grain
M_17 901-911 TO:0000397, funRiceGene:32, xzyao:369 denotes Grain Size
M_18 1151-1161 TO:0000397, funRiceGene:32, xzyao:369 denotes grain size
M_19 373-385 TO:0000919, funRiceGene:451, xzyao:2169 denotes grain weight
M_20 943-966 xzyao:5273 denotes heavy panicle phenotype
M_21 874-886 TO:0002759, funRiceGene:341, xzyao:14670 denotes Grain number
M_22 1257-1269 TO:0002759, funRiceGene:341, xzyao:14670 denotes grain number
M_23 675-690 WTO:0000110, xzyao:263 denotes solar radiation
M_24 108-117 hunflair:NA:CellLine denotes Shuhui498
M_25 1006-1015 hunflair:NA:CellLine denotes Shuhui498
M_26 77-80 hunflair:NA:Gene denotes GS3
M_27 915-918 hunflair:NA:Gene denotes GS3
M_28 53-57 hunflair:NA:Species denotes rice
M_29 168-172 hunflair:NA:Species denotes rice
M_30 447-451 hunflair:NA:Species denotes rice
M_31 508-512 hunflair:NA:Species denotes rice
M_32 783-787 hunflair:NA:Species denotes rice
M_33 987-991 hunflair:NA:Species denotes rice
M_34 1566-1570 hunflair:NA:Species denotes rice
M_35 1619-1623 hunflair:NA:Species denotes rice
M_36 68-72 hunflair:NA:Gene denotes Gn1a
M_37 891-895 hunflair:NA:Gene denotes Gn1a
M_38 210-213 hunflair:NA:Gene denotes gs3
M_39 1128-1131 hunflair:NA:Gene denotes gs3
M_40 196-200 hunflair:NA:Gene denotes gn1a
M_41 1033-1037 hunflair:NA:Gene denotes gn1a
M_42 1331-1339 hunflair:NA:Gene denotes gn1aR498
M_43 665-690 pubtator:MESH:D011832:Disease denotes deficient solar radiation
M_44 53-57 pubtator:4530:Species denotes rice
M_45 168-172 pubtator:4530:Species denotes rice
M_46 447-451 pubtator:4530:Species denotes rice
M_47 508-512 pubtator:4530:Species denotes rice
M_48 783-787 pubtator:4530:Species denotes rice
M_49 987-991 pubtator:4530:Species denotes rice
M_50 1566-1570 pubtator:4530:Species denotes rice
M_51 1619-1623 pubtator:4530:Species denotes rice

OryzaGP_2021_v2

Id Subject Object Predicate Lexical cue
T1 68-72 http://identifiers.org/oryzabase.gene/6047 denotes Gn1a
T2 77-80 http://identifiers.org/oryzabase.gene/22998 denotes GS3
T3 77-80 http://identifiers.org/oryzabase.gene/2135 denotes GS3
T4 196-200 http://identifiers.org/oryzabase.gene/6047 denotes gn1a
T5 891-895 http://identifiers.org/oryzabase.gene/6047 denotes Gn1a
T6 915-918 http://identifiers.org/oryzabase.gene/22998 denotes GS3
T7 915-918 http://identifiers.org/oryzabase.gene/2135 denotes GS3
T8 1033-1037 http://identifiers.org/oryzabase.gene/6047 denotes gn1a
T60666 68-72 http://identifiers.org/rapdb.locus/Os01g0197700 denotes Gn1a
T97395 77-80 http://identifiers.org/rapdb.locus/Os12g0528400 denotes GS3
T8909 77-80 http://identifiers.org/rapdb.locus/Os03g0407400 denotes GS3
T19692 196-200 http://identifiers.org/rapdb.locus/Os01g0197700 denotes gn1a
T3602 891-895 http://identifiers.org/rapdb.locus/Os01g0197700 denotes Gn1a
T52897 915-918 http://identifiers.org/rapdb.locus/Os12g0528400 denotes GS3
T75342 915-918 http://identifiers.org/rapdb.locus/Os03g0407400 denotes GS3
T29549 1033-1037 http://identifiers.org/rapdb.locus/Os01g0197700 denotes gn1a

OryzaGP_2022

Id Subject Object Predicate Lexical cue
T1 874-889 http://identifiers.org/oryzabase.gene/6047 denotes Grain number 1a

OryzaGP_2021_FLAIR

Id Subject Object Predicate Lexical cue
M_0 68-72 hunflair:NA:Gene denotes Gn1a
M_1 891-895 hunflair:NA:Gene denotes Gn1a
M_2 210-213 hunflair:NA:Gene denotes gs3
M_3 1128-1131 hunflair:NA:Gene denotes gs3
M_4 196-200 hunflair:NA:Gene denotes gn1a
M_5 1033-1037 hunflair:NA:Gene denotes gn1a
M_6 108-117 hunflair:NA:CellLine denotes Shuhui498
M_7 1006-1015 hunflair:NA:CellLine denotes Shuhui498
M_8 53-57 hunflair:NA:Species denotes rice
M_9 168-172 hunflair:NA:Species denotes rice
M_10 447-451 hunflair:NA:Species denotes rice
M_11 508-512 hunflair:NA:Species denotes rice
M_12 783-787 hunflair:NA:Species denotes rice
M_13 987-991 hunflair:NA:Species denotes rice
M_14 1566-1570 hunflair:NA:Species denotes rice
M_15 1619-1623 hunflair:NA:Species denotes rice
M_16 1331-1339 hunflair:NA:Gene denotes gn1aR498
M_17 77-80 hunflair:NA:Gene denotes GS3
M_18 915-918 hunflair:NA:Gene denotes GS3

OryzaGP_2021

Id Subject Object Predicate Lexical cue
T1 68-72 http://identifiers.org/oryzabase.gene/6047 denotes Gn1a
T2 77-80 http://identifiers.org/oryzabase.gene/22998 denotes GS3
T3 77-80 http://identifiers.org/oryzabase.gene/2135 denotes GS3
T4 196-200 http://identifiers.org/oryzabase.gene/6047 denotes gn1a
T5 210-213 http://identifiers.org/oryzabase.gene/22998 denotes gs3
T6 210-213 http://identifiers.org/oryzabase.gene/2135 denotes gs3
T7 874-889 http://identifiers.org/oryzabase.gene/6047 denotes Grain number 1a
T8 891-895 http://identifiers.org/oryzabase.gene/6047 denotes Gn1a
T9 915-918 http://identifiers.org/oryzabase.gene/22998 denotes GS3
T10 915-918 http://identifiers.org/oryzabase.gene/2135 denotes GS3
T11 1033-1037 http://identifiers.org/oryzabase.gene/6047 denotes gn1a
T12 1108-1120 http://identifiers.org/oryzabase.gene/8136 denotes grain number
T13 1108-1120 http://identifiers.org/oryzabase.gene/2274 denotes grain number
T14 1108-1120 http://identifiers.org/oryzabase.gene/21251 denotes grain number
T15 1108-1120 http://identifiers.org/oryzabase.gene/11639 denotes grain number
T16 1128-1131 http://identifiers.org/oryzabase.gene/22998 denotes gs3
T17 1128-1131 http://identifiers.org/oryzabase.gene/2135 denotes gs3
T18 1151-1161 http://identifiers.org/oryzabase.gene/2135 denotes grain size
T19 1257-1269 http://identifiers.org/oryzabase.gene/8136 denotes grain number
T20 1257-1269 http://identifiers.org/oryzabase.gene/2274 denotes grain number
T21 1257-1269 http://identifiers.org/oryzabase.gene/21251 denotes grain number
T22 1257-1269 http://identifiers.org/oryzabase.gene/11639 denotes grain number
T76346 68-72 http://identifiers.org/ricegap/LOC_Os01g10110 denotes Gn1a
T53948 77-80 http://identifiers.org/ricegap/LOC_Os12g34380 denotes GS3
T97110 196-200 http://identifiers.org/ricegap/LOC_Os01g10110 denotes gn1a
T34573 210-213 http://identifiers.org/ricegap/LOC_Os12g34380 denotes gs3
T1021 874-889 http://identifiers.org/ricegap/LOC_Os01g10110 denotes Grain number 1a
T52826 891-895 http://identifiers.org/ricegap/LOC_Os01g10110 denotes Gn1a
T89437 915-918 http://identifiers.org/ricegap/LOC_Os12g34380 denotes GS3
T13195 1033-1037 http://identifiers.org/ricegap/LOC_Os01g10110 denotes gn1a
T67558 1108-1120 http://identifiers.org/ricegap/LOC_Os08g37890 denotes grain number
T74395 1108-1120 http://identifiers.org/ricegap/LOC_Os07g49460 denotes grain number
T37088 1108-1120 http://identifiers.org/ricegap/LOC_Os07g15770 denotes grain number
T71625 1108-1120 http://identifiers.org/ricegap/LOC_Os02g49880 denotes grain number
T6367 1128-1131 http://identifiers.org/ricegap/LOC_Os12g34380 denotes gs3
T22137 1257-1269 http://identifiers.org/ricegap/LOC_Os08g37890 denotes grain number
T79754 1257-1269 http://identifiers.org/ricegap/LOC_Os07g49460 denotes grain number
T70476 1257-1269 http://identifiers.org/ricegap/LOC_Os07g15770 denotes grain number
T76120 1257-1269 http://identifiers.org/ricegap/LOC_Os02g49880 denotes grain number
T17273 68-72 http://identifiers.org/rapdb.locus/Os01g0197700 denotes Gn1a
T65287 77-80 http://identifiers.org/rapdb.locus/Os12g0528400 denotes GS3
T83601 77-80 http://identifiers.org/rapdb.locus/Os03g0407400 denotes GS3
T18438 196-200 http://identifiers.org/rapdb.locus/Os01g0197700 denotes gn1a
T68937 210-213 http://identifiers.org/rapdb.locus/Os12g0528400 denotes gs3
T51152 210-213 http://identifiers.org/rapdb.locus/Os03g0407400 denotes gs3
T16709 874-889 http://identifiers.org/rapdb.locus/Os01g0197700 denotes Grain number 1a
T35859 891-895 http://identifiers.org/rapdb.locus/Os01g0197700 denotes Gn1a
T62380 901-913 http://identifiers.org/rapdb.locus/Os03g0407400 denotes Grain Size 3
T55379 915-918 http://identifiers.org/rapdb.locus/Os12g0528400 denotes GS3
T57143 915-918 http://identifiers.org/rapdb.locus/Os03g0407400 denotes GS3
T21715 1033-1037 http://identifiers.org/rapdb.locus/Os01g0197700 denotes gn1a
T22077 1108-1120 http://identifiers.org/rapdb.locus/Os08g0485500 denotes grain number
T96273 1108-1120 http://identifiers.org/rapdb.locus/Os07g0695100 denotes grain number
T64126 1108-1120 http://identifiers.org/rapdb.locus/Os07g0261200 denotes grain number
T43757 1108-1120 http://identifiers.org/rapdb.locus/Os02g0731700 denotes grain number
T16510 1128-1131 http://identifiers.org/rapdb.locus/Os12g0528400 denotes gs3
T3548 1128-1131 http://identifiers.org/rapdb.locus/Os03g0407400 denotes gs3
T18381 1151-1161 http://identifiers.org/rapdb.locus/Os03g0407400 denotes grain size
T53746 1257-1269 http://identifiers.org/rapdb.locus/Os08g0485500 denotes grain number
T43944 1257-1269 http://identifiers.org/rapdb.locus/Os07g0695100 denotes grain number
T58866 1257-1269 http://identifiers.org/rapdb.locus/Os07g0261200 denotes grain number
T23 1257-1269 http://identifiers.org/rapdb.locus/Os02g0731700 denotes grain number
T6008 68-72 http://identifiers.org/uniprot/Q4ADV8 denotes Gn1a
T86184 77-80 http://identifiers.org/uniprot/Q2PZ33 denotes GS3
T16925 77-80 http://identifiers.org/uniprot/C6L686 denotes GS3
T25427 77-80 http://identifiers.org/uniprot/A0A3G9EDT2 denotes GS3
T79802 874-889 http://identifiers.org/uniprot/Q4ADV8 denotes Grain number 1a
T31695 891-895 http://identifiers.org/uniprot/Q4ADV8 denotes Gn1a
T38146 915-918 http://identifiers.org/uniprot/Q2PZ33 denotes GS3
T9544 915-918 http://identifiers.org/uniprot/C6L686 denotes GS3
T27888 915-918 http://identifiers.org/uniprot/A0A3G9EDT2 denotes GS3
T62538 1108-1120 http://identifiers.org/uniprot/Q0D3B6 denotes grain number
T15441 1151-1161 http://identifiers.org/uniprot/C6L686 denotes grain size
T15885 1257-1269 http://identifiers.org/uniprot/Q0D3B6 denotes grain number
M_0 68-72 hunflair:NA:Gene denotes Gn1a
M_1 891-895 hunflair:NA:Gene denotes Gn1a
M_2 210-213 hunflair:NA:Gene denotes gs3
M_3 1128-1131 hunflair:NA:Gene denotes gs3
M_4 196-200 hunflair:NA:Gene denotes gn1a
M_5 1033-1037 hunflair:NA:Gene denotes gn1a
M_6 108-117 hunflair:NA:CellLine denotes Shuhui498
M_7 1006-1015 hunflair:NA:CellLine denotes Shuhui498
M_8 53-57 hunflair:NA:Species denotes rice
M_9 168-172 hunflair:NA:Species denotes rice
M_10 447-451 hunflair:NA:Species denotes rice
M_11 508-512 hunflair:NA:Species denotes rice
M_12 783-787 hunflair:NA:Species denotes rice
M_13 987-991 hunflair:NA:Species denotes rice
M_14 1566-1570 hunflair:NA:Species denotes rice
M_15 1619-1623 hunflair:NA:Species denotes rice
M_16 1331-1339 hunflair:NA:Gene denotes gn1aR498
M_17 77-80 hunflair:NA:Gene denotes GS3
M_18 915-918 hunflair:NA:Gene denotes GS3

kaiyin_test

Id Subject Object Predicate Lexical cue
T1 844-860 NegReg denotes loss-of-function
T2 861-870 Var denotes mutations
T3 891-895 Gene denotes Gn1a
T4 915-918 Gene denotes GS3
T6 923-934 Reg denotes responsible
T5 943-966 MPA denotes heavy panicle phenotype
R1 T2 T6 CauseOf mutations,responsible
R2 T5 T6 ThemeOf heavy panicle phenotype,responsible
R3 T4 T2 ThemeOf GS3,mutations
R4 T3 T2 ThemeOf Gn1a,mutations
R5 T2 T1 CauseOf mutations,loss-of-function

name_no

Id Subject Object Predicate Lexical cue
T1 844-860 NegReg denotes loss-of-function
T2 861-870 Var denotes mutations
T3 891-895 Gene denotes Gn1a
T4 915-918 Gene denotes GS3
T6 923-934 Reg denotes responsible
T5 943-966 MPA denotes heavy panicle phenotype
R1 T2 T6 CauseOf mutations,responsible
R2 T5 T6 ThemeOf heavy panicle phenotype,responsible
R3 T4 T2 ThemeOf GS3,mutations
R4 T3 T2 ThemeOf Gn1a,mutations
R5 T2 T1 CauseOf mutations,loss-of-function