
PubMed:28604678
Annnotations
LitCoin-entities-OrganismTaxon-PD
Id | Subject | Object | Predicate | Lexical cue | db_id |
---|---|---|---|---|---|
T1 | 441-446 | OrganismTaxon | denotes | human | NCBItxid:9606 |
LitCoin-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 0-121 | Sentence | denotes | Dynamic subunit turnover in ESCRT-III assemblies is regulated by Vps4 to mediate membrane remodelling during cytokinesis. |
T2 | 122-270 | Sentence | denotes | The endosomal sorting complex required for transport (ESCRT)-III mediates membrane fission in fundamental cellular processes, including cytokinesis. |
T3 | 271-384 | Sentence | denotes | ESCRT-III is thought to form persistent filaments that over time increase their curvature to constrict membranes. |
T4 | 385-546 | Sentence | denotes | Unexpectedly, we found that ESCRT-III at the midbody of human cells rapidly turns over subunits with cytoplasmic pools while gradually forming larger assemblies. |
T5 | 547-733 | Sentence | denotes | ESCRT-III turnover depended on the ATPase VPS4, which accumulated at the midbody simultaneously with ESCRT-III subunits, and was required for assembly of functional ESCRT-III structures. |
T6 | 734-932 | Sentence | denotes | In vitro, the Vps2/Vps24 subunits of ESCRT-III formed side-by-side filaments with Snf7 and inhibited further polymerization, but the growth inhibition was alleviated by the addition of Vps4 and ATP. |
T7 | 933-1074 | Sentence | denotes | High-speed atomic force microscopy further revealed highly dynamic arrays of growing and shrinking ESCRT-III spirals in the presence of Vps4. |
T8 | 1075-1249 | Sentence | denotes | Continuous ESCRT-III remodelling by subunit turnover might facilitate shape adaptions to variable membrane geometries, with broad implications for diverse cellular processes. |
LitCoin-entities
Id | Subject | Object | Predicate | Lexical cue | db_id |
---|---|---|---|---|---|
13081 | 28-37 | GeneOrGeneProduct | denotes | ESCRT-III | NCBIGene:128866|NCBIGene:27243|NCBIGene:51652 |
13082 | 65-69 | GeneOrGeneProduct | denotes | Vps4 | NCBIGene:27183|NCBIGene:9525 |
13083 | 126-186 | GeneOrGeneProduct | denotes | endosomal sorting complex required for transport (ESCRT)-III | NCBIGene:128866|NCBIGene:27243|NCBIGene:51652 |
13084 | 271-280 | GeneOrGeneProduct | denotes | ESCRT-III | NCBIGene:128866|NCBIGene:27243|NCBIGene:51652 |
13085 | 413-422 | GeneOrGeneProduct | denotes | ESCRT-III | NCBIGene:128866|NCBIGene:27243|NCBIGene:51652 |
13086 | 441-446 | OrganismTaxon | denotes | human | NCBITaxon:9606 |
13087 | 547-556 | GeneOrGeneProduct | denotes | ESCRT-III | NCBIGene:128866|NCBIGene:27243|NCBIGene:51652 |
13088 | 582-588 | GeneOrGeneProduct | denotes | ATPase | NCBIGene:27183|NCBIGene:9525 |
13089 | 589-593 | GeneOrGeneProduct | denotes | VPS4 | NCBIGene:27183|NCBIGene:9525 |
13090 | 648-657 | GeneOrGeneProduct | denotes | ESCRT-III | NCBIGene:128866|NCBIGene:27243|NCBIGene:51652 |
13091 | 712-721 | GeneOrGeneProduct | denotes | ESCRT-III | NCBIGene:128866|NCBIGene:27243|NCBIGene:51652 |
13092 | 748-752 | GeneOrGeneProduct | denotes | Vps2 | NCBIGene:27243 |
13093 | 753-758 | GeneOrGeneProduct | denotes | Vps24 | NCBIGene:51652 |
13094 | 771-780 | GeneOrGeneProduct | denotes | ESCRT-III | NCBIGene:128866|NCBIGene:27243|NCBIGene:51652 |
13095 | 816-820 | GeneOrGeneProduct | denotes | Snf7 | NCBIGene:128866|NCBIGene:29082 |
13096 | 919-923 | GeneOrGeneProduct | denotes | Vps4 | NCBIGene:27183|NCBIGene:9525 |
13097 | 928-931 | ChemicalEntity | denotes | ATP | MESH:D000255 |
13098 | 1032-1041 | GeneOrGeneProduct | denotes | ESCRT-III | NCBIGene:128866|NCBIGene:27243|NCBIGene:51652 |
13099 | 1069-1073 | GeneOrGeneProduct | denotes | Vps4 | NCBIGene:27183|NCBIGene:9525 |
13100 | 1086-1095 | GeneOrGeneProduct | denotes | ESCRT-III | NCBIGene:128866|NCBIGene:27243|NCBIGene:51652 |
LitCoin-GeneOrGeneProduct-v0
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 28-37 | GeneOrGeneProduct | denotes | ESCRT-III |
T2 | 38-48 | GeneOrGeneProduct | denotes | assemblies |
T3 | 52-61 | GeneOrGeneProduct | denotes | regulated |
T4 | 65-69 | GeneOrGeneProduct | denotes | Vps4 |
T5 | 73-80 | GeneOrGeneProduct | denotes | mediate |
T6 | 109-120 | GeneOrGeneProduct | denotes | cytokinesis |
T7 | 136-143 | GeneOrGeneProduct | denotes | sorting |
T8 | 165-174 | GeneOrGeneProduct | denotes | transport |
T9 | 176-181 | GeneOrGeneProduct | denotes | ESCRT |
T10 | 183-186 | GeneOrGeneProduct | denotes | III |
T11 | 187-195 | GeneOrGeneProduct | denotes | mediates |
T12 | 237-246 | GeneOrGeneProduct | denotes | processes |
T13 | 258-269 | GeneOrGeneProduct | denotes | cytokinesis |
T14 | 271-280 | GeneOrGeneProduct | denotes | ESCRT-III |
T15 | 300-310 | GeneOrGeneProduct | denotes | persistent |
T16 | 331-335 | GeneOrGeneProduct | denotes | time |
T17 | 413-422 | GeneOrGeneProduct | denotes | ESCRT-III |
T18 | 447-452 | GeneOrGeneProduct | denotes | cells |
T19 | 486-497 | GeneOrGeneProduct | denotes | cytoplasmic |
T20 | 535-545 | GeneOrGeneProduct | denotes | assemblies |
T21 | 547-556 | GeneOrGeneProduct | denotes | ESCRT-III |
T22 | 582-588 | GeneOrGeneProduct | denotes | ATPase |
T23 | 589-593 | GeneOrGeneProduct | denotes | VPS4 |
T24 | 648-657 | GeneOrGeneProduct | denotes | ESCRT-III |
T25 | 689-697 | GeneOrGeneProduct | denotes | assembly |
T26 | 712-721 | GeneOrGeneProduct | denotes | ESCRT-III |
T27 | 748-752 | GeneOrGeneProduct | denotes | Vps2 |
T28 | 753-758 | GeneOrGeneProduct | denotes | Vps24 |
T29 | 771-780 | GeneOrGeneProduct | denotes | ESCRT-III |
T30 | 788-792 | GeneOrGeneProduct | denotes | side |
T31 | 796-800 | GeneOrGeneProduct | denotes | side |
T32 | 816-820 | GeneOrGeneProduct | denotes | Snf7 |
T33 | 867-873 | GeneOrGeneProduct | denotes | growth |
T34 | 919-923 | GeneOrGeneProduct | denotes | Vps4 |
T35 | 928-931 | GeneOrGeneProduct | denotes | ATP |
T36 | 933-937 | GeneOrGeneProduct | denotes | High |
T37 | 951-956 | GeneOrGeneProduct | denotes | force |
T38 | 985-991 | GeneOrGeneProduct | denotes | highly |
T39 | 1010-1017 | GeneOrGeneProduct | denotes | growing |
T40 | 1032-1041 | GeneOrGeneProduct | denotes | ESCRT-III |
T41 | 1069-1073 | GeneOrGeneProduct | denotes | Vps4 |
T42 | 1086-1095 | GeneOrGeneProduct | denotes | ESCRT-III |
T43 | 1199-1204 | GeneOrGeneProduct | denotes | broad |
T44 | 1239-1248 | GeneOrGeneProduct | denotes | processes |
LitCoin-GeneOrGeneProduct-v2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 28-37 | GeneOrGeneProduct | denotes | ESCRT-III |
T2 | 65-69 | GeneOrGeneProduct | denotes | Vps4 |
T3 | 109-120 | GeneOrGeneProduct | denotes | cytokinesis |
T4 | 176-181 | GeneOrGeneProduct | denotes | ESCRT |
T5 | 258-269 | GeneOrGeneProduct | denotes | cytokinesis |
T6 | 271-280 | GeneOrGeneProduct | denotes | ESCRT-III |
T7 | 413-422 | GeneOrGeneProduct | denotes | ESCRT-III |
T8 | 486-497 | GeneOrGeneProduct | denotes | cytoplasmic |
T9 | 547-556 | GeneOrGeneProduct | denotes | ESCRT-III |
T10 | 582-588 | GeneOrGeneProduct | denotes | ATPase |
T11 | 589-593 | GeneOrGeneProduct | denotes | VPS4 |
T12 | 648-657 | GeneOrGeneProduct | denotes | ESCRT-III |
T13 | 689-697 | GeneOrGeneProduct | denotes | assembly |
T14 | 712-721 | GeneOrGeneProduct | denotes | ESCRT-III |
T15 | 748-752 | GeneOrGeneProduct | denotes | Vps2 |
T16 | 753-758 | GeneOrGeneProduct | denotes | Vps24 |
T17 | 771-780 | GeneOrGeneProduct | denotes | ESCRT-III |
T18 | 788-792 | GeneOrGeneProduct | denotes | side |
T19 | 796-800 | GeneOrGeneProduct | denotes | side |
T20 | 816-820 | GeneOrGeneProduct | denotes | Snf7 |
T21 | 867-873 | GeneOrGeneProduct | denotes | growth |
T22 | 919-923 | GeneOrGeneProduct | denotes | Vps4 |
T23 | 1032-1041 | GeneOrGeneProduct | denotes | ESCRT-III |
T24 | 1069-1073 | GeneOrGeneProduct | denotes | Vps4 |
T25 | 1086-1095 | GeneOrGeneProduct | denotes | ESCRT-III |
T26 | 1199-1204 | GeneOrGeneProduct | denotes | broad |
LitCoin-GeneOrGeneProduct-v3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 28-37 | GeneOrGeneProduct | denotes | ESCRT-III |
T2 | 65-69 | GeneOrGeneProduct | denotes | Vps4 |
T3 | 176-181 | GeneOrGeneProduct | denotes | ESCRT |
T4 | 271-280 | GeneOrGeneProduct | denotes | ESCRT-III |
T5 | 413-422 | GeneOrGeneProduct | denotes | ESCRT-III |
T6 | 486-497 | GeneOrGeneProduct | denotes | cytoplasmic |
T7 | 547-556 | GeneOrGeneProduct | denotes | ESCRT-III |
T8 | 582-588 | GeneOrGeneProduct | denotes | ATPase |
T9 | 589-593 | GeneOrGeneProduct | denotes | VPS4 |
T10 | 648-657 | GeneOrGeneProduct | denotes | ESCRT-III |
T11 | 712-721 | GeneOrGeneProduct | denotes | ESCRT-III |
T12 | 748-752 | GeneOrGeneProduct | denotes | Vps2 |
T13 | 753-758 | GeneOrGeneProduct | denotes | Vps24 |
T14 | 771-780 | GeneOrGeneProduct | denotes | ESCRT-III |
T15 | 816-820 | GeneOrGeneProduct | denotes | Snf7 |
T16 | 919-923 | GeneOrGeneProduct | denotes | Vps4 |
T17 | 1032-1041 | GeneOrGeneProduct | denotes | ESCRT-III |
T18 | 1069-1073 | GeneOrGeneProduct | denotes | Vps4 |
T19 | 1086-1095 | GeneOrGeneProduct | denotes | ESCRT-III |
LitCoin-NCBITaxon-2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 441-446 | OrganismTaxon | denotes | human |
LitCoin-Chemical-MeSH-CHEBI
Id | Subject | Object | Predicate | Lexical cue | ID: |
---|---|---|---|---|---|
T1 | 582-588 | ChemicalEntity | denotes | ATPase | D000251 |
T2 | 928-931 | ChemicalEntity | denotes | ATP | http://purl.obolibrary.org/obo/CHEBI_30616|http://purl.obolibrary.org/obo/CHEBI_15422 |
LitCoin-training-merged
Id | Subject | Object | Predicate | Lexical cue | ID: |
---|---|---|---|---|---|
T2 | 928-931 | ChemicalEntity | denotes | ATP | http://purl.obolibrary.org/obo/CHEBI_15422|http://purl.obolibrary.org/obo/CHEBI_30616 |
T1 | 582-588 | ChemicalEntity | denotes | ATPase | D000251 |
T19 | 1086-1095 | GeneOrGeneProduct | denotes | ESCRT-III | |
T18 | 1069-1073 | GeneOrGeneProduct | denotes | Vps4 | |
T17 | 1032-1041 | GeneOrGeneProduct | denotes | ESCRT-III | |
T16 | 919-923 | GeneOrGeneProduct | denotes | Vps4 | |
T15 | 816-820 | GeneOrGeneProduct | denotes | Snf7 | |
T14 | 771-780 | GeneOrGeneProduct | denotes | ESCRT-III | |
T13 | 753-758 | GeneOrGeneProduct | denotes | Vps24 | |
T12 | 748-752 | GeneOrGeneProduct | denotes | Vps2 | |
T11 | 712-721 | GeneOrGeneProduct | denotes | ESCRT-III | |
T10 | 648-657 | GeneOrGeneProduct | denotes | ESCRT-III | |
T9 | 589-593 | GeneOrGeneProduct | denotes | VPS4 | |
T8 | 582-588 | GeneOrGeneProduct | denotes | ATPase | |
T7 | 547-556 | GeneOrGeneProduct | denotes | ESCRT-III | |
T6 | 486-497 | GeneOrGeneProduct | denotes | cytoplasmic | |
T5 | 413-422 | GeneOrGeneProduct | denotes | ESCRT-III | |
T4 | 271-280 | GeneOrGeneProduct | denotes | ESCRT-III | |
T3 | 176-181 | GeneOrGeneProduct | denotes | ESCRT | |
T11476 | 65-69 | GeneOrGeneProduct | denotes | Vps4 | |
T49188 | 28-37 | GeneOrGeneProduct | denotes | ESCRT-III | |
T78992 | 441-446 | OrganismTaxon | denotes | human |