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LitCoin-entities-OrganismTaxon-PD

Id Subject Object Predicate Lexical cue db_id
T1 441-446 OrganismTaxon denotes human NCBItxid:9606

LitCoin-sentences

Id Subject Object Predicate Lexical cue
T1 0-121 Sentence denotes Dynamic subunit turnover in ESCRT-III assemblies is regulated by Vps4 to mediate membrane remodelling during cytokinesis.
T2 122-270 Sentence denotes The endosomal sorting complex required for transport (ESCRT)-III mediates membrane fission in fundamental cellular processes, including cytokinesis.
T3 271-384 Sentence denotes ESCRT-III is thought to form persistent filaments that over time increase their curvature to constrict membranes.
T4 385-546 Sentence denotes Unexpectedly, we found that ESCRT-III at the midbody of human cells rapidly turns over subunits with cytoplasmic pools while gradually forming larger assemblies.
T5 547-733 Sentence denotes ESCRT-III turnover depended on the ATPase VPS4, which accumulated at the midbody simultaneously with ESCRT-III subunits, and was required for assembly of functional ESCRT-III structures.
T6 734-932 Sentence denotes In vitro, the Vps2/Vps24 subunits of ESCRT-III formed side-by-side filaments with Snf7 and inhibited further polymerization, but the growth inhibition was alleviated by the addition of Vps4 and ATP.
T7 933-1074 Sentence denotes High-speed atomic force microscopy further revealed highly dynamic arrays of growing and shrinking ESCRT-III spirals in the presence of Vps4.
T8 1075-1249 Sentence denotes Continuous ESCRT-III remodelling by subunit turnover might facilitate shape adaptions to variable membrane geometries, with broad implications for diverse cellular processes.

LitCoin-entities

Id Subject Object Predicate Lexical cue db_id
13081 28-37 GeneOrGeneProduct denotes ESCRT-III NCBIGene:128866|NCBIGene:27243|NCBIGene:51652
13082 65-69 GeneOrGeneProduct denotes Vps4 NCBIGene:27183|NCBIGene:9525
13083 126-186 GeneOrGeneProduct denotes endosomal sorting complex required for transport (ESCRT)-III NCBIGene:128866|NCBIGene:27243|NCBIGene:51652
13084 271-280 GeneOrGeneProduct denotes ESCRT-III NCBIGene:128866|NCBIGene:27243|NCBIGene:51652
13085 413-422 GeneOrGeneProduct denotes ESCRT-III NCBIGene:128866|NCBIGene:27243|NCBIGene:51652
13086 441-446 OrganismTaxon denotes human NCBITaxon:9606
13087 547-556 GeneOrGeneProduct denotes ESCRT-III NCBIGene:128866|NCBIGene:27243|NCBIGene:51652
13088 582-588 GeneOrGeneProduct denotes ATPase NCBIGene:27183|NCBIGene:9525
13089 589-593 GeneOrGeneProduct denotes VPS4 NCBIGene:27183|NCBIGene:9525
13090 648-657 GeneOrGeneProduct denotes ESCRT-III NCBIGene:128866|NCBIGene:27243|NCBIGene:51652
13091 712-721 GeneOrGeneProduct denotes ESCRT-III NCBIGene:128866|NCBIGene:27243|NCBIGene:51652
13092 748-752 GeneOrGeneProduct denotes Vps2 NCBIGene:27243
13093 753-758 GeneOrGeneProduct denotes Vps24 NCBIGene:51652
13094 771-780 GeneOrGeneProduct denotes ESCRT-III NCBIGene:128866|NCBIGene:27243|NCBIGene:51652
13095 816-820 GeneOrGeneProduct denotes Snf7 NCBIGene:128866|NCBIGene:29082
13096 919-923 GeneOrGeneProduct denotes Vps4 NCBIGene:27183|NCBIGene:9525
13097 928-931 ChemicalEntity denotes ATP MESH:D000255
13098 1032-1041 GeneOrGeneProduct denotes ESCRT-III NCBIGene:128866|NCBIGene:27243|NCBIGene:51652
13099 1069-1073 GeneOrGeneProduct denotes Vps4 NCBIGene:27183|NCBIGene:9525
13100 1086-1095 GeneOrGeneProduct denotes ESCRT-III NCBIGene:128866|NCBIGene:27243|NCBIGene:51652

LitCoin-GeneOrGeneProduct-v0

Id Subject Object Predicate Lexical cue
T1 28-37 GeneOrGeneProduct denotes ESCRT-III
T2 38-48 GeneOrGeneProduct denotes assemblies
T3 52-61 GeneOrGeneProduct denotes regulated
T4 65-69 GeneOrGeneProduct denotes Vps4
T5 73-80 GeneOrGeneProduct denotes mediate
T6 109-120 GeneOrGeneProduct denotes cytokinesis
T7 136-143 GeneOrGeneProduct denotes sorting
T8 165-174 GeneOrGeneProduct denotes transport
T9 176-181 GeneOrGeneProduct denotes ESCRT
T10 183-186 GeneOrGeneProduct denotes III
T11 187-195 GeneOrGeneProduct denotes mediates
T12 237-246 GeneOrGeneProduct denotes processes
T13 258-269 GeneOrGeneProduct denotes cytokinesis
T14 271-280 GeneOrGeneProduct denotes ESCRT-III
T15 300-310 GeneOrGeneProduct denotes persistent
T16 331-335 GeneOrGeneProduct denotes time
T17 413-422 GeneOrGeneProduct denotes ESCRT-III
T18 447-452 GeneOrGeneProduct denotes cells
T19 486-497 GeneOrGeneProduct denotes cytoplasmic
T20 535-545 GeneOrGeneProduct denotes assemblies
T21 547-556 GeneOrGeneProduct denotes ESCRT-III
T22 582-588 GeneOrGeneProduct denotes ATPase
T23 589-593 GeneOrGeneProduct denotes VPS4
T24 648-657 GeneOrGeneProduct denotes ESCRT-III
T25 689-697 GeneOrGeneProduct denotes assembly
T26 712-721 GeneOrGeneProduct denotes ESCRT-III
T27 748-752 GeneOrGeneProduct denotes Vps2
T28 753-758 GeneOrGeneProduct denotes Vps24
T29 771-780 GeneOrGeneProduct denotes ESCRT-III
T30 788-792 GeneOrGeneProduct denotes side
T31 796-800 GeneOrGeneProduct denotes side
T32 816-820 GeneOrGeneProduct denotes Snf7
T33 867-873 GeneOrGeneProduct denotes growth
T34 919-923 GeneOrGeneProduct denotes Vps4
T35 928-931 GeneOrGeneProduct denotes ATP
T36 933-937 GeneOrGeneProduct denotes High
T37 951-956 GeneOrGeneProduct denotes force
T38 985-991 GeneOrGeneProduct denotes highly
T39 1010-1017 GeneOrGeneProduct denotes growing
T40 1032-1041 GeneOrGeneProduct denotes ESCRT-III
T41 1069-1073 GeneOrGeneProduct denotes Vps4
T42 1086-1095 GeneOrGeneProduct denotes ESCRT-III
T43 1199-1204 GeneOrGeneProduct denotes broad
T44 1239-1248 GeneOrGeneProduct denotes processes

LitCoin-GeneOrGeneProduct-v2

Id Subject Object Predicate Lexical cue
T1 28-37 GeneOrGeneProduct denotes ESCRT-III
T2 65-69 GeneOrGeneProduct denotes Vps4
T3 109-120 GeneOrGeneProduct denotes cytokinesis
T4 176-181 GeneOrGeneProduct denotes ESCRT
T5 258-269 GeneOrGeneProduct denotes cytokinesis
T6 271-280 GeneOrGeneProduct denotes ESCRT-III
T7 413-422 GeneOrGeneProduct denotes ESCRT-III
T8 486-497 GeneOrGeneProduct denotes cytoplasmic
T9 547-556 GeneOrGeneProduct denotes ESCRT-III
T10 582-588 GeneOrGeneProduct denotes ATPase
T11 589-593 GeneOrGeneProduct denotes VPS4
T12 648-657 GeneOrGeneProduct denotes ESCRT-III
T13 689-697 GeneOrGeneProduct denotes assembly
T14 712-721 GeneOrGeneProduct denotes ESCRT-III
T15 748-752 GeneOrGeneProduct denotes Vps2
T16 753-758 GeneOrGeneProduct denotes Vps24
T17 771-780 GeneOrGeneProduct denotes ESCRT-III
T18 788-792 GeneOrGeneProduct denotes side
T19 796-800 GeneOrGeneProduct denotes side
T20 816-820 GeneOrGeneProduct denotes Snf7
T21 867-873 GeneOrGeneProduct denotes growth
T22 919-923 GeneOrGeneProduct denotes Vps4
T23 1032-1041 GeneOrGeneProduct denotes ESCRT-III
T24 1069-1073 GeneOrGeneProduct denotes Vps4
T25 1086-1095 GeneOrGeneProduct denotes ESCRT-III
T26 1199-1204 GeneOrGeneProduct denotes broad

LitCoin-GeneOrGeneProduct-v3

Id Subject Object Predicate Lexical cue
T1 28-37 GeneOrGeneProduct denotes ESCRT-III
T2 65-69 GeneOrGeneProduct denotes Vps4
T3 176-181 GeneOrGeneProduct denotes ESCRT
T4 271-280 GeneOrGeneProduct denotes ESCRT-III
T5 413-422 GeneOrGeneProduct denotes ESCRT-III
T6 486-497 GeneOrGeneProduct denotes cytoplasmic
T7 547-556 GeneOrGeneProduct denotes ESCRT-III
T8 582-588 GeneOrGeneProduct denotes ATPase
T9 589-593 GeneOrGeneProduct denotes VPS4
T10 648-657 GeneOrGeneProduct denotes ESCRT-III
T11 712-721 GeneOrGeneProduct denotes ESCRT-III
T12 748-752 GeneOrGeneProduct denotes Vps2
T13 753-758 GeneOrGeneProduct denotes Vps24
T14 771-780 GeneOrGeneProduct denotes ESCRT-III
T15 816-820 GeneOrGeneProduct denotes Snf7
T16 919-923 GeneOrGeneProduct denotes Vps4
T17 1032-1041 GeneOrGeneProduct denotes ESCRT-III
T18 1069-1073 GeneOrGeneProduct denotes Vps4
T19 1086-1095 GeneOrGeneProduct denotes ESCRT-III

LitCoin-NCBITaxon-2

Id Subject Object Predicate Lexical cue
T1 441-446 OrganismTaxon denotes human

LitCoin-Chemical-MeSH-CHEBI

Id Subject Object Predicate Lexical cue ID:
T1 582-588 ChemicalEntity denotes ATPase D000251
T2 928-931 ChemicalEntity denotes ATP http://purl.obolibrary.org/obo/CHEBI_30616|http://purl.obolibrary.org/obo/CHEBI_15422

LitCoin-training-merged

Id Subject Object Predicate Lexical cue ID:
T2 928-931 ChemicalEntity denotes ATP http://purl.obolibrary.org/obo/CHEBI_15422|http://purl.obolibrary.org/obo/CHEBI_30616
T1 582-588 ChemicalEntity denotes ATPase D000251
T19 1086-1095 GeneOrGeneProduct denotes ESCRT-III
T18 1069-1073 GeneOrGeneProduct denotes Vps4
T17 1032-1041 GeneOrGeneProduct denotes ESCRT-III
T16 919-923 GeneOrGeneProduct denotes Vps4
T15 816-820 GeneOrGeneProduct denotes Snf7
T14 771-780 GeneOrGeneProduct denotes ESCRT-III
T13 753-758 GeneOrGeneProduct denotes Vps24
T12 748-752 GeneOrGeneProduct denotes Vps2
T11 712-721 GeneOrGeneProduct denotes ESCRT-III
T10 648-657 GeneOrGeneProduct denotes ESCRT-III
T9 589-593 GeneOrGeneProduct denotes VPS4
T8 582-588 GeneOrGeneProduct denotes ATPase
T7 547-556 GeneOrGeneProduct denotes ESCRT-III
T6 486-497 GeneOrGeneProduct denotes cytoplasmic
T5 413-422 GeneOrGeneProduct denotes ESCRT-III
T4 271-280 GeneOrGeneProduct denotes ESCRT-III
T3 176-181 GeneOrGeneProduct denotes ESCRT
T11476 65-69 GeneOrGeneProduct denotes Vps4
T49188 28-37 GeneOrGeneProduct denotes ESCRT-III
T78992 441-446 OrganismTaxon denotes human