PubMed:28604678
Annnotations
LitCoin-entities-OrganismTaxon-PD
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 441-446 | OrganismTaxon | denotes | human | NCBItxid:9606 |
LitCoin-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-121 | Sentence | denotes | Dynamic subunit turnover in ESCRT-III assemblies is regulated by Vps4 to mediate membrane remodelling during cytokinesis. |
| T2 | 122-270 | Sentence | denotes | The endosomal sorting complex required for transport (ESCRT)-III mediates membrane fission in fundamental cellular processes, including cytokinesis. |
| T3 | 271-384 | Sentence | denotes | ESCRT-III is thought to form persistent filaments that over time increase their curvature to constrict membranes. |
| T4 | 385-546 | Sentence | denotes | Unexpectedly, we found that ESCRT-III at the midbody of human cells rapidly turns over subunits with cytoplasmic pools while gradually forming larger assemblies. |
| T5 | 547-733 | Sentence | denotes | ESCRT-III turnover depended on the ATPase VPS4, which accumulated at the midbody simultaneously with ESCRT-III subunits, and was required for assembly of functional ESCRT-III structures. |
| T6 | 734-932 | Sentence | denotes | In vitro, the Vps2/Vps24 subunits of ESCRT-III formed side-by-side filaments with Snf7 and inhibited further polymerization, but the growth inhibition was alleviated by the addition of Vps4 and ATP. |
| T7 | 933-1074 | Sentence | denotes | High-speed atomic force microscopy further revealed highly dynamic arrays of growing and shrinking ESCRT-III spirals in the presence of Vps4. |
| T8 | 1075-1249 | Sentence | denotes | Continuous ESCRT-III remodelling by subunit turnover might facilitate shape adaptions to variable membrane geometries, with broad implications for diverse cellular processes. |
LitCoin-entities
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| 13081 | 28-37 | GeneOrGeneProduct | denotes | ESCRT-III | NCBIGene:128866|NCBIGene:27243|NCBIGene:51652 |
| 13082 | 65-69 | GeneOrGeneProduct | denotes | Vps4 | NCBIGene:27183|NCBIGene:9525 |
| 13083 | 126-186 | GeneOrGeneProduct | denotes | endosomal sorting complex required for transport (ESCRT)-III | NCBIGene:128866|NCBIGene:27243|NCBIGene:51652 |
| 13084 | 271-280 | GeneOrGeneProduct | denotes | ESCRT-III | NCBIGene:128866|NCBIGene:27243|NCBIGene:51652 |
| 13085 | 413-422 | GeneOrGeneProduct | denotes | ESCRT-III | NCBIGene:128866|NCBIGene:27243|NCBIGene:51652 |
| 13086 | 441-446 | OrganismTaxon | denotes | human | NCBITaxon:9606 |
| 13087 | 547-556 | GeneOrGeneProduct | denotes | ESCRT-III | NCBIGene:128866|NCBIGene:27243|NCBIGene:51652 |
| 13088 | 582-588 | GeneOrGeneProduct | denotes | ATPase | NCBIGene:27183|NCBIGene:9525 |
| 13089 | 589-593 | GeneOrGeneProduct | denotes | VPS4 | NCBIGene:27183|NCBIGene:9525 |
| 13090 | 648-657 | GeneOrGeneProduct | denotes | ESCRT-III | NCBIGene:128866|NCBIGene:27243|NCBIGene:51652 |
| 13091 | 712-721 | GeneOrGeneProduct | denotes | ESCRT-III | NCBIGene:128866|NCBIGene:27243|NCBIGene:51652 |
| 13092 | 748-752 | GeneOrGeneProduct | denotes | Vps2 | NCBIGene:27243 |
| 13093 | 753-758 | GeneOrGeneProduct | denotes | Vps24 | NCBIGene:51652 |
| 13094 | 771-780 | GeneOrGeneProduct | denotes | ESCRT-III | NCBIGene:128866|NCBIGene:27243|NCBIGene:51652 |
| 13095 | 816-820 | GeneOrGeneProduct | denotes | Snf7 | NCBIGene:128866|NCBIGene:29082 |
| 13096 | 919-923 | GeneOrGeneProduct | denotes | Vps4 | NCBIGene:27183|NCBIGene:9525 |
| 13097 | 928-931 | ChemicalEntity | denotes | ATP | MESH:D000255 |
| 13098 | 1032-1041 | GeneOrGeneProduct | denotes | ESCRT-III | NCBIGene:128866|NCBIGene:27243|NCBIGene:51652 |
| 13099 | 1069-1073 | GeneOrGeneProduct | denotes | Vps4 | NCBIGene:27183|NCBIGene:9525 |
| 13100 | 1086-1095 | GeneOrGeneProduct | denotes | ESCRT-III | NCBIGene:128866|NCBIGene:27243|NCBIGene:51652 |
LitCoin-GeneOrGeneProduct-v0
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 28-37 | GeneOrGeneProduct | denotes | ESCRT-III |
| T2 | 38-48 | GeneOrGeneProduct | denotes | assemblies |
| T3 | 52-61 | GeneOrGeneProduct | denotes | regulated |
| T4 | 65-69 | GeneOrGeneProduct | denotes | Vps4 |
| T5 | 73-80 | GeneOrGeneProduct | denotes | mediate |
| T6 | 109-120 | GeneOrGeneProduct | denotes | cytokinesis |
| T7 | 136-143 | GeneOrGeneProduct | denotes | sorting |
| T8 | 165-174 | GeneOrGeneProduct | denotes | transport |
| T9 | 176-181 | GeneOrGeneProduct | denotes | ESCRT |
| T10 | 183-186 | GeneOrGeneProduct | denotes | III |
| T11 | 187-195 | GeneOrGeneProduct | denotes | mediates |
| T12 | 237-246 | GeneOrGeneProduct | denotes | processes |
| T13 | 258-269 | GeneOrGeneProduct | denotes | cytokinesis |
| T14 | 271-280 | GeneOrGeneProduct | denotes | ESCRT-III |
| T15 | 300-310 | GeneOrGeneProduct | denotes | persistent |
| T16 | 331-335 | GeneOrGeneProduct | denotes | time |
| T17 | 413-422 | GeneOrGeneProduct | denotes | ESCRT-III |
| T18 | 447-452 | GeneOrGeneProduct | denotes | cells |
| T19 | 486-497 | GeneOrGeneProduct | denotes | cytoplasmic |
| T20 | 535-545 | GeneOrGeneProduct | denotes | assemblies |
| T21 | 547-556 | GeneOrGeneProduct | denotes | ESCRT-III |
| T22 | 582-588 | GeneOrGeneProduct | denotes | ATPase |
| T23 | 589-593 | GeneOrGeneProduct | denotes | VPS4 |
| T24 | 648-657 | GeneOrGeneProduct | denotes | ESCRT-III |
| T25 | 689-697 | GeneOrGeneProduct | denotes | assembly |
| T26 | 712-721 | GeneOrGeneProduct | denotes | ESCRT-III |
| T27 | 748-752 | GeneOrGeneProduct | denotes | Vps2 |
| T28 | 753-758 | GeneOrGeneProduct | denotes | Vps24 |
| T29 | 771-780 | GeneOrGeneProduct | denotes | ESCRT-III |
| T30 | 788-792 | GeneOrGeneProduct | denotes | side |
| T31 | 796-800 | GeneOrGeneProduct | denotes | side |
| T32 | 816-820 | GeneOrGeneProduct | denotes | Snf7 |
| T33 | 867-873 | GeneOrGeneProduct | denotes | growth |
| T34 | 919-923 | GeneOrGeneProduct | denotes | Vps4 |
| T35 | 928-931 | GeneOrGeneProduct | denotes | ATP |
| T36 | 933-937 | GeneOrGeneProduct | denotes | High |
| T37 | 951-956 | GeneOrGeneProduct | denotes | force |
| T38 | 985-991 | GeneOrGeneProduct | denotes | highly |
| T39 | 1010-1017 | GeneOrGeneProduct | denotes | growing |
| T40 | 1032-1041 | GeneOrGeneProduct | denotes | ESCRT-III |
| T41 | 1069-1073 | GeneOrGeneProduct | denotes | Vps4 |
| T42 | 1086-1095 | GeneOrGeneProduct | denotes | ESCRT-III |
| T43 | 1199-1204 | GeneOrGeneProduct | denotes | broad |
| T44 | 1239-1248 | GeneOrGeneProduct | denotes | processes |
LitCoin-GeneOrGeneProduct-v2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 28-37 | GeneOrGeneProduct | denotes | ESCRT-III |
| T2 | 65-69 | GeneOrGeneProduct | denotes | Vps4 |
| T3 | 109-120 | GeneOrGeneProduct | denotes | cytokinesis |
| T4 | 176-181 | GeneOrGeneProduct | denotes | ESCRT |
| T5 | 258-269 | GeneOrGeneProduct | denotes | cytokinesis |
| T6 | 271-280 | GeneOrGeneProduct | denotes | ESCRT-III |
| T7 | 413-422 | GeneOrGeneProduct | denotes | ESCRT-III |
| T8 | 486-497 | GeneOrGeneProduct | denotes | cytoplasmic |
| T9 | 547-556 | GeneOrGeneProduct | denotes | ESCRT-III |
| T10 | 582-588 | GeneOrGeneProduct | denotes | ATPase |
| T11 | 589-593 | GeneOrGeneProduct | denotes | VPS4 |
| T12 | 648-657 | GeneOrGeneProduct | denotes | ESCRT-III |
| T13 | 689-697 | GeneOrGeneProduct | denotes | assembly |
| T14 | 712-721 | GeneOrGeneProduct | denotes | ESCRT-III |
| T15 | 748-752 | GeneOrGeneProduct | denotes | Vps2 |
| T16 | 753-758 | GeneOrGeneProduct | denotes | Vps24 |
| T17 | 771-780 | GeneOrGeneProduct | denotes | ESCRT-III |
| T18 | 788-792 | GeneOrGeneProduct | denotes | side |
| T19 | 796-800 | GeneOrGeneProduct | denotes | side |
| T20 | 816-820 | GeneOrGeneProduct | denotes | Snf7 |
| T21 | 867-873 | GeneOrGeneProduct | denotes | growth |
| T22 | 919-923 | GeneOrGeneProduct | denotes | Vps4 |
| T23 | 1032-1041 | GeneOrGeneProduct | denotes | ESCRT-III |
| T24 | 1069-1073 | GeneOrGeneProduct | denotes | Vps4 |
| T25 | 1086-1095 | GeneOrGeneProduct | denotes | ESCRT-III |
| T26 | 1199-1204 | GeneOrGeneProduct | denotes | broad |
LitCoin-GeneOrGeneProduct-v3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 28-37 | GeneOrGeneProduct | denotes | ESCRT-III |
| T2 | 65-69 | GeneOrGeneProduct | denotes | Vps4 |
| T3 | 176-181 | GeneOrGeneProduct | denotes | ESCRT |
| T4 | 271-280 | GeneOrGeneProduct | denotes | ESCRT-III |
| T5 | 413-422 | GeneOrGeneProduct | denotes | ESCRT-III |
| T6 | 486-497 | GeneOrGeneProduct | denotes | cytoplasmic |
| T7 | 547-556 | GeneOrGeneProduct | denotes | ESCRT-III |
| T8 | 582-588 | GeneOrGeneProduct | denotes | ATPase |
| T9 | 589-593 | GeneOrGeneProduct | denotes | VPS4 |
| T10 | 648-657 | GeneOrGeneProduct | denotes | ESCRT-III |
| T11 | 712-721 | GeneOrGeneProduct | denotes | ESCRT-III |
| T12 | 748-752 | GeneOrGeneProduct | denotes | Vps2 |
| T13 | 753-758 | GeneOrGeneProduct | denotes | Vps24 |
| T14 | 771-780 | GeneOrGeneProduct | denotes | ESCRT-III |
| T15 | 816-820 | GeneOrGeneProduct | denotes | Snf7 |
| T16 | 919-923 | GeneOrGeneProduct | denotes | Vps4 |
| T17 | 1032-1041 | GeneOrGeneProduct | denotes | ESCRT-III |
| T18 | 1069-1073 | GeneOrGeneProduct | denotes | Vps4 |
| T19 | 1086-1095 | GeneOrGeneProduct | denotes | ESCRT-III |
LitCoin-NCBITaxon-2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 441-446 | OrganismTaxon | denotes | human |
LitCoin-Chemical-MeSH-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | ID: |
|---|---|---|---|---|---|
| T1 | 582-588 | ChemicalEntity | denotes | ATPase | D000251 |
| T2 | 928-931 | ChemicalEntity | denotes | ATP | http://purl.obolibrary.org/obo/CHEBI_30616|http://purl.obolibrary.org/obo/CHEBI_15422 |
LitCoin-training-merged
| Id | Subject | Object | Predicate | Lexical cue | ID: |
|---|---|---|---|---|---|
| T2 | 928-931 | ChemicalEntity | denotes | ATP | http://purl.obolibrary.org/obo/CHEBI_15422|http://purl.obolibrary.org/obo/CHEBI_30616 |
| T1 | 582-588 | ChemicalEntity | denotes | ATPase | D000251 |
| T19 | 1086-1095 | GeneOrGeneProduct | denotes | ESCRT-III | |
| T18 | 1069-1073 | GeneOrGeneProduct | denotes | Vps4 | |
| T17 | 1032-1041 | GeneOrGeneProduct | denotes | ESCRT-III | |
| T16 | 919-923 | GeneOrGeneProduct | denotes | Vps4 | |
| T15 | 816-820 | GeneOrGeneProduct | denotes | Snf7 | |
| T14 | 771-780 | GeneOrGeneProduct | denotes | ESCRT-III | |
| T13 | 753-758 | GeneOrGeneProduct | denotes | Vps24 | |
| T12 | 748-752 | GeneOrGeneProduct | denotes | Vps2 | |
| T11 | 712-721 | GeneOrGeneProduct | denotes | ESCRT-III | |
| T10 | 648-657 | GeneOrGeneProduct | denotes | ESCRT-III | |
| T9 | 589-593 | GeneOrGeneProduct | denotes | VPS4 | |
| T8 | 582-588 | GeneOrGeneProduct | denotes | ATPase | |
| T7 | 547-556 | GeneOrGeneProduct | denotes | ESCRT-III | |
| T6 | 486-497 | GeneOrGeneProduct | denotes | cytoplasmic | |
| T5 | 413-422 | GeneOrGeneProduct | denotes | ESCRT-III | |
| T4 | 271-280 | GeneOrGeneProduct | denotes | ESCRT-III | |
| T3 | 176-181 | GeneOrGeneProduct | denotes | ESCRT | |
| T11476 | 65-69 | GeneOrGeneProduct | denotes | Vps4 | |
| T49188 | 28-37 | GeneOrGeneProduct | denotes | ESCRT-III | |
| T78992 | 441-446 | OrganismTaxon | denotes | human |