PubMed:28553305 JSON TXT

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pqqtest_sentence

{"project":"pqqtest_sentence","denotations":[{"id":"M_0","span":{"begin":2,"end":102},"obj":"cand:PO:0025215-phyllome stomatal complex"},{"id":"M_1","span":{"begin":2,"end":102},"obj":"cand:PECO:0007272-Scirpophaga innotata exposure"},{"id":"M_2","span":{"begin":2,"end":102},"obj":"cand:WTO:0000549-resistance to Leaf Rust"},{"id":"M_3","span":{"begin":2,"end":102},"obj":"cand:funRiceGene:34-Brassinosteroid Signaling"},{"id":"M_4","span":{"begin":2,"end":102},"obj":"cand:WTO:0000542-resistance to Common Root Rot"},{"id":"M_5","span":{"begin":2,"end":102},"obj":"cand:funRiceGene:287-Heat Stress Response"},{"id":"M_6","span":{"begin":2,"end":102},"obj":"cand:PO:0007110-2.09 main shoot and axillary shoots visible at nine or more nodes stage"},{"id":"M_7","span":{"begin":2,"end":102},"obj":"cand:TO:0000837-cardinal part of a multi-tissue plant structure morphology trait"},{"id":"M_8","span":{"begin":2,"end":102},"obj":"cand:TO:0000926-multi-tissue plant structure growth and development trait"},{"id":"M_9","span":{"begin":2,"end":102},"obj":"cand:PECO:0007109-ssRNA positive-strand virus with no DNA stage exposure"},{"id":"M_10","span":{"begin":2,"end":102},"obj":"cand:PECO:0007111-ssRNA negative-strand virus exposure"},{"id":"M_11","span":{"begin":274,"end":304},"obj":"cand:TO:0020097-stomatal opening"},{"id":"M_12","span":{"begin":274,"end":304},"obj":"cand:PO:0008032-stomatal pore"},{"id":"M_13","span":{"begin":274,"end":304},"obj":"cand:TO:0000521-stomatal closure time"},{"id":"M_14","span":{"begin":274,"end":304},"obj":"cand:PO:0002000-stomatal complex"},{"id":"M_15","span":{"begin":274,"end":304},"obj":"cand:PO:0025221-tepal stomatal complex"},{"id":"M_16","span":{"begin":274,"end":304},"obj":"cand:PO:0025235-leaf stomatal pore"},{"id":"M_17","span":{"begin":274,"end":304},"obj":"cand:PO:0025398-phyllome substomatal cavity"},{"id":"M_18","span":{"begin":274,"end":304},"obj":"cand:PO:0025189-petiole stomatal complex"},{"id":"M_19","span":{"begin":274,"end":304},"obj":"cand:PO:0025215-phyllome stomatal complex"},{"id":"M_20","span":{"begin":274,"end":304},"obj":"cand:PO:0025234-phyllome stomatal pore"},{"id":"M_21","span":{"begin":20,"end":26},"obj":"GeneID:RAPID:Os01g0210700MSUID:LOC_Os01g11250"},{"id":"M_22","span":{"begin":228,"end":264},"obj":"GeneID:NA"},{"id":"T77552","span":{"begin":1425,"end":1441},"obj":"xzyao:44348"},{"id":"T27579","span":{"begin":1087,"end":1114},"obj":"xzyao:26673"},{"id":"T84518","span":{"begin":1425,"end":1451},"obj":"xzyao:2631"},{"id":"T20617","span":{"begin":466,"end":477},"obj":"xzyao:12970"},{"id":"T60277","span":{"begin":111,"end":116},"obj":"funRiceGene:377"},{"id":"T15547","span":{"begin":1337,"end":1342},"obj":"funRiceGene:377"},{"id":"T13308","span":{"begin":1460,"end":1465},"obj":"funRiceGene:377"},{"id":"T72530","span":{"begin":111,"end":124},"obj":"xzyao:7022"},{"id":"T92001","span":{"begin":1460,"end":1473},"obj":"xzyao:7022"},{"id":"T28622","span":{"begin":55,"end":63},"obj":"funRiceGene:367"},{"id":"T86906","span":{"begin":288,"end":296},"obj":"funRiceGene:367"},{"id":"T81555","span":{"begin":528,"end":536},"obj":"funRiceGene:367"},{"id":"T27975","span":{"begin":1066,"end":1074},"obj":"funRiceGene:367"},{"id":"T15901","span":{"begin":1229,"end":1237},"obj":"funRiceGene:367"},{"id":"T26325","span":{"begin":941,"end":970},"obj":"xzyao:25066"},{"id":"T90429","span":{"begin":955,"end":965},"obj":"xzyao:641"},{"id":"T21530","span":{"begin":1308,"end":1323},"obj":"xzyao:6550"},{"id":"T64722","span":{"begin":1327,"end":1333},"obj":"WTO:0000021, funRiceGene:221"},{"id":"T15821","span":{"begin":683,"end":695},"obj":"xzyao:32070"},{"id":"T62725","span":{"begin":664,"end":675},"obj":"xzyao:8656"},{"id":"T41504","span":{"begin":246,"end":264},"obj":"xzyao:3326"},{"id":"T13562","span":{"begin":976,"end":987},"obj":"xzyao:15868"},{"id":"T61222","span":{"begin":228,"end":264},"obj":"xzyao:7034"},{"id":"M_23","span":{"begin":274,"end":304},"obj":"xzyao:2347"},{"id":"M_24","span":{"begin":1052,"end":1082},"obj":"xzyao:2347"},{"id":"M_25","span":{"begin":85,"end":102},"obj":"TO:0000276, funRiceGene:56, xzyao:34997"},{"id":"M_26","span":{"begin":1097,"end":1114},"obj":"TO:0000276, funRiceGene:56, xzyao:34997"},{"id":"M_27","span":{"begin":1434,"end":1451},"obj":"TO:0000276, funRiceGene:56, xzyao:34997"},{"id":"M_28","span":{"begin":55,"end":71},"obj":"TO:0020097, xzyao:557"},{"id":"M_29","span":{"begin":288,"end":304},"obj":"TO:0020097, xzyao:557"},{"id":"M_30","span":{"begin":1066,"end":1082},"obj":"TO:0020097, xzyao:557"},{"id":"M_31","span":{"begin":1229,"end":1245},"obj":"TO:0020097, xzyao:557"},{"id":"M_32","span":{"begin":344,"end":365},"obj":"xzyao:33635"},{"id":"M_33","span":{"begin":1174,"end":1195},"obj":"xzyao:33635"},{"id":"M_34","span":{"begin":85,"end":92},"obj":"WTO:0000218, funRiceGene:356"},{"id":"M_35","span":{"begin":1097,"end":1104},"obj":"WTO:0000218, funRiceGene:356"},{"id":"M_36","span":{"begin":1434,"end":1441},"obj":"WTO:0000218, funRiceGene:356"},{"id":"M_37","span":{"begin":705,"end":725},"obj":"xzyao:28703"},{"id":"M_38","span":{"begin":134,"end":141},"obj":"funRiceGene:461"},{"id":"M_39","span":{"begin":246,"end":255},"obj":"funRiceGene:412"},{"id":"M_40","span":{"begin":356,"end":365},"obj":"funRiceGene:412"},{"id":"M_41","span":{"begin":1186,"end":1195},"obj":"funRiceGene:412"},{"id":"M_42","span":{"begin":356,"end":373},"obj":"xzyao:6057"},{"id":"M_43","span":{"begin":1186,"end":1203},"obj":"xzyao:6057"},{"id":"M_44","span":{"begin":2,"end":102},"obj":"xzyao:13640"},{"id":"M_45","span":{"begin":93,"end":102},"obj":"funRiceGene:214"},{"id":"M_46","span":{"begin":1105,"end":1114},"obj":"funRiceGene:214"},{"id":"M_47","span":{"begin":1442,"end":1451},"obj":"funRiceGene:214"},{"id":"M_48","span":{"begin":960,"end":970},"obj":"funRiceGene:49, xzyao:35823"},{"id":"M_49","span":{"begin":727,"end":732},"obj":"hunflair:NA:Species"},{"id":"M_50","span":{"begin":404,"end":410},"obj":"hunflair:NA:Gene"},{"id":"M_51","span":{"begin":246,"end":255},"obj":"hunflair:NA:Chemical"},{"id":"M_52","span":{"begin":356,"end":365},"obj":"hunflair:NA:Chemical"},{"id":"M_53","span":{"begin":1186,"end":1195},"obj":"hunflair:NA:Chemical"},{"id":"M_54","span":{"begin":326,"end":373},"obj":"hunflair:NA:Gene"},{"id":"M_55","span":{"begin":1346,"end":1350},"obj":"hunflair:NA:Species"},{"id":"M_56","span":{"begin":356,"end":373},"obj":"hunflair:NA:Gene"},{"id":"M_57","span":{"begin":1186,"end":1203},"obj":"hunflair:NA:Gene"},{"id":"M_58","span":{"begin":384,"end":390},"obj":"hunflair:NA:Gene"},{"id":"M_59","span":{"begin":228,"end":264},"obj":"hunflair:NA:Gene"},{"id":"M_60","span":{"begin":664,"end":675},"obj":"hunflair:NA:Chemical"},{"id":"M_61","span":{"begin":128,"end":132},"obj":"hunflair:NA:Species"},{"id":"M_62","span":{"begin":306,"end":310},"obj":"hunflair:NA:Species"},{"id":"M_63","span":{"begin":168,"end":173},"obj":"hunflair:NA:Chemical"},{"id":"M_64","span":{"begin":960,"end":965},"obj":"hunflair:NA:Chemical"},{"id":"M_65","span":{"begin":20,"end":26},"obj":"hunflair:NA:Gene"},{"id":"M_66","span":{"begin":392,"end":398},"obj":"hunflair:NA:Gene"},{"id":"M_67","span":{"begin":430,"end":436},"obj":"hunflair:NA:Gene"},{"id":"M_68","span":{"begin":518,"end":524},"obj":"hunflair:NA:Gene"},{"id":"M_69","span":{"begin":595,"end":601},"obj":"hunflair:NA:Gene"},{"id":"M_70","span":{"begin":610,"end":616},"obj":"hunflair:NA:Gene"},{"id":"M_71","span":{"begin":628,"end":634},"obj":"hunflair:NA:Gene"},{"id":"M_72","span":{"begin":920,"end":926},"obj":"hunflair:NA:Gene"},{"id":"M_73","span":{"begin":1142,"end":1148},"obj":"hunflair:NA:Gene"},{"id":"M_74","span":{"begin":1280,"end":1286},"obj":"hunflair:NA:Gene"},{"id":"M_75","span":{"begin":1368,"end":1374},"obj":"hunflair:NA:Gene"},{"id":"M_76","span":{"begin":635,"end":640},"obj":"pubtator:p.T285D:ProteinMutation"},{"id":"M_77","span":{"begin":128,"end":132},"obj":"pubtator:4530:Species"},{"id":"M_78","span":{"begin":306,"end":310},"obj":"pubtator:4530:Species"},{"id":"M_79","span":{"begin":602,"end":607},"obj":"pubtator:p.T235R:ProteinMutation"},{"id":"M_80","span":{"begin":927,"end":932},"obj":"pubtator:p.T235R:ProteinMutation"},{"id":"M_81","span":{"begin":1287,"end":1292},"obj":"pubtator:p.T235R:ProteinMutation"},{"id":"M_82","span":{"begin":246,"end":255},"obj":"pubtator:MESH:D011188:Chemical"},{"id":"M_83","span":{"begin":356,"end":365},"obj":"pubtator:MESH:D011188:Chemical"},{"id":"M_84","span":{"begin":1186,"end":1195},"obj":"pubtator:MESH:D011188:Chemical"},{"id":"M_85","span":{"begin":288,"end":304},"obj":"pubtator:MESH:D013280:Disease"},{"id":"M_86","span":{"begin":1066,"end":1082},"obj":"pubtator:MESH:D013280:Disease"},{"id":"M_87","span":{"begin":1229,"end":1245},"obj":"pubtator:MESH:D013280:Disease"},{"id":"M_88","span":{"begin":1346,"end":1350},"obj":"pubtator:4530:Species"},{"id":"M_89","span":{"begin":85,"end":102},"obj":"pubtator:MESH:C536747:Disease"},{"id":"M_90","span":{"begin":617,"end":622},"obj":"pubtator:c.285T\u0026gt;A:DNAMutation"},{"id":"M_91","span":{"begin":55,"end":71},"obj":"pubtator:MESH:D013280:Disease"},{"id":"M_92","span":{"begin":727,"end":732},"obj":"pubtator:4932:Species"}],"text":"A Dominant Negative OsKAT2 Mutant Delays Light-Induced Stomatal Opening and Improves Drought Tolerance without Yield Penalty in Rice.\nStomata are the main gateways for water and air transport between leaves and the environment. Inward-rectifying potassium channels regulate photo-induced stomatal opening. Rice contains three inward rectifying shaker-like potassium channel proteins, OsKAT1, OsKAT2, and OsKAT3. Among these, only OsKAT2 is specifically expressed in guard cells. Here, we investigated the functions of OsKAT2 in stomatal regulation using three dominant negative mutant proteins, OsKAT2(T235R), OsKAT2(T285A) and OsKAT2(T285D), which are altered in amino acids in the channel pore and at a phosphorylation site. Yeast complementation and patch clamp assays showed that all three mutant proteins lost channel activity. However, among plants overexpressing these mutant proteins, only plants overexpressing OsKAT2(T235R) showed significantly less water loss than the control. Moreover, overexpression of this mutant protein led to delayed photo-induced stomatal opening and increased drought tolerance. Our results indicate that OsKAT2 is an inward- rectifying shaker-like potassium channel that mainly functions in stomatal opening. Interestingly, overexpression of OsKAT2(T235R) did not cause serious defects in growth or yield in rice, suggesting that OsKAT2 is a potential target for engineering plants with improved drought tolerance without yield penalty."}

21k_plant_trait_mention

OryzaGP_2021

OryzaGP_2021_v2

OryzaGP_2021_FLAIR

{"project":"OryzaGP_2021_FLAIR","denotations":[{"id":"M_0","span":{"begin":404,"end":410},"obj":"hunflair:NA:Gene"},{"id":"M_1","span":{"begin":384,"end":390},"obj":"hunflair:NA:Gene"},{"id":"M_2","span":{"begin":128,"end":132},"obj":"hunflair:NA:Species"},{"id":"M_3","span":{"begin":306,"end":310},"obj":"hunflair:NA:Species"},{"id":"M_4","span":{"begin":727,"end":732},"obj":"hunflair:NA:Species"},{"id":"M_5","span":{"begin":664,"end":675},"obj":"hunflair:NA:Chemical"},{"id":"M_6","span":{"begin":1346,"end":1350},"obj":"hunflair:NA:Species"},{"id":"M_7","span":{"begin":168,"end":173},"obj":"hunflair:NA:Chemical"},{"id":"M_8","span":{"begin":960,"end":965},"obj":"hunflair:NA:Chemical"},{"id":"M_9","span":{"begin":356,"end":373},"obj":"hunflair:NA:Gene"},{"id":"M_10","span":{"begin":1186,"end":1203},"obj":"hunflair:NA:Gene"},{"id":"M_11","span":{"begin":326,"end":373},"obj":"hunflair:NA:Gene"},{"id":"M_12","span":{"begin":246,"end":255},"obj":"hunflair:NA:Chemical"},{"id":"M_13","span":{"begin":356,"end":365},"obj":"hunflair:NA:Chemical"},{"id":"M_14","span":{"begin":1186,"end":1195},"obj":"hunflair:NA:Chemical"},{"id":"M_15","span":{"begin":228,"end":264},"obj":"hunflair:NA:Gene"},{"id":"M_16","span":{"begin":20,"end":26},"obj":"hunflair:NA:Gene"},{"id":"M_17","span":{"begin":392,"end":398},"obj":"hunflair:NA:Gene"},{"id":"M_18","span":{"begin":430,"end":436},"obj":"hunflair:NA:Gene"},{"id":"M_19","span":{"begin":518,"end":524},"obj":"hunflair:NA:Gene"},{"id":"M_20","span":{"begin":595,"end":601},"obj":"hunflair:NA:Gene"},{"id":"M_21","span":{"begin":610,"end":616},"obj":"hunflair:NA:Gene"},{"id":"M_22","span":{"begin":628,"end":634},"obj":"hunflair:NA:Gene"},{"id":"M_23","span":{"begin":920,"end":926},"obj":"hunflair:NA:Gene"},{"id":"M_24","span":{"begin":1142,"end":1148},"obj":"hunflair:NA:Gene"},{"id":"M_25","span":{"begin":1280,"end":1286},"obj":"hunflair:NA:Gene"},{"id":"M_26","span":{"begin":1368,"end":1374},"obj":"hunflair:NA:Gene"}],"text":"A Dominant Negative OsKAT2 Mutant Delays Light-Induced Stomatal Opening and Improves Drought Tolerance without Yield Penalty in Rice.\nStomata are the main gateways for water and air transport between leaves and the environment. Inward-rectifying potassium channels regulate photo-induced stomatal opening. Rice contains three inward rectifying shaker-like potassium channel proteins, OsKAT1, OsKAT2, and OsKAT3. Among these, only OsKAT2 is specifically expressed in guard cells. Here, we investigated the functions of OsKAT2 in stomatal regulation using three dominant negative mutant proteins, OsKAT2(T235R), OsKAT2(T285A) and OsKAT2(T285D), which are altered in amino acids in the channel pore and at a phosphorylation site. Yeast complementation and patch clamp assays showed that all three mutant proteins lost channel activity. However, among plants overexpressing these mutant proteins, only plants overexpressing OsKAT2(T235R) showed significantly less water loss than the control. Moreover, overexpression of this mutant protein led to delayed photo-induced stomatal opening and increased drought tolerance. Our results indicate that OsKAT2 is an inward- rectifying shaker-like potassium channel that mainly functions in stomatal opening. Interestingly, overexpression of OsKAT2(T235R) did not cause serious defects in growth or yield in rice, suggesting that OsKAT2 is a potential target for engineering plants with improved drought tolerance without yield penalty."}

funRiceGenes-all

{"project":"funRiceGenes-all","denotations":[{"id":"PTO-all_T1","span":{"begin":55,"end":71},"obj":"http://purl.obolibrary.org/obo/TO_0020097"},{"id":"PTO-all_T2","span":{"begin":85,"end":102},"obj":"http://purl.obolibrary.org/obo/TO_0000276"},{"id":"PTO-all_T3","span":{"begin":288,"end":304},"obj":"http://purl.obolibrary.org/obo/TO_0020097"},{"id":"PTO-all_T4","span":{"begin":1066,"end":1082},"obj":"http://purl.obolibrary.org/obo/TO_0020097"},{"id":"PTO-all_T5","span":{"begin":1097,"end":1114},"obj":"http://purl.obolibrary.org/obo/TO_0000276"},{"id":"PTO-all_T6","span":{"begin":1229,"end":1245},"obj":"http://purl.obolibrary.org/obo/TO_0020097"},{"id":"PTO-all_T7","span":{"begin":1434,"end":1451},"obj":"http://purl.obolibrary.org/obo/TO_0000276"}],"text":"A Dominant Negative OsKAT2 Mutant Delays Light-Induced Stomatal Opening and Improves Drought Tolerance without Yield Penalty in Rice.\nStomata are the main gateways for water and air transport between leaves and the environment. Inward-rectifying potassium channels regulate photo-induced stomatal opening. Rice contains three inward rectifying shaker-like potassium channel proteins, OsKAT1, OsKAT2, and OsKAT3. Among these, only OsKAT2 is specifically expressed in guard cells. Here, we investigated the functions of OsKAT2 in stomatal regulation using three dominant negative mutant proteins, OsKAT2(T235R), OsKAT2(T285A) and OsKAT2(T285D), which are altered in amino acids in the channel pore and at a phosphorylation site. Yeast complementation and patch clamp assays showed that all three mutant proteins lost channel activity. However, among plants overexpressing these mutant proteins, only plants overexpressing OsKAT2(T235R) showed significantly less water loss than the control. Moreover, overexpression of this mutant protein led to delayed photo-induced stomatal opening and increased drought tolerance. Our results indicate that OsKAT2 is an inward- rectifying shaker-like potassium channel that mainly functions in stomatal opening. Interestingly, overexpression of OsKAT2(T235R) did not cause serious defects in growth or yield in rice, suggesting that OsKAT2 is a potential target for engineering plants with improved drought tolerance without yield penalty."}

funRiceGenes-exact

{"project":"funRiceGenes-exact","denotations":[{"id":"PTO-exact_T1","span":{"begin":55,"end":71},"obj":"http://purl.obolibrary.org/obo/TO_0020097"},{"id":"PTO-exact_T2","span":{"begin":85,"end":102},"obj":"http://purl.obolibrary.org/obo/TO_0000276"},{"id":"PTO-exact_T3","span":{"begin":288,"end":304},"obj":"http://purl.obolibrary.org/obo/TO_0020097"},{"id":"PTO-exact_T4","span":{"begin":1066,"end":1082},"obj":"http://purl.obolibrary.org/obo/TO_0020097"},{"id":"PTO-exact_T5","span":{"begin":1097,"end":1114},"obj":"http://purl.obolibrary.org/obo/TO_0000276"},{"id":"PTO-exact_T6","span":{"begin":1229,"end":1245},"obj":"http://purl.obolibrary.org/obo/TO_0020097"},{"id":"PTO-exact_T7","span":{"begin":1434,"end":1451},"obj":"http://purl.obolibrary.org/obo/TO_0000276"}],"text":"A Dominant Negative OsKAT2 Mutant Delays Light-Induced Stomatal Opening and Improves Drought Tolerance without Yield Penalty in Rice.\nStomata are the main gateways for water and air transport between leaves and the environment. Inward-rectifying potassium channels regulate photo-induced stomatal opening. Rice contains three inward rectifying shaker-like potassium channel proteins, OsKAT1, OsKAT2, and OsKAT3. Among these, only OsKAT2 is specifically expressed in guard cells. Here, we investigated the functions of OsKAT2 in stomatal regulation using three dominant negative mutant proteins, OsKAT2(T235R), OsKAT2(T285A) and OsKAT2(T285D), which are altered in amino acids in the channel pore and at a phosphorylation site. Yeast complementation and patch clamp assays showed that all three mutant proteins lost channel activity. However, among plants overexpressing these mutant proteins, only plants overexpressing OsKAT2(T235R) showed significantly less water loss than the control. Moreover, overexpression of this mutant protein led to delayed photo-induced stomatal opening and increased drought tolerance. Our results indicate that OsKAT2 is an inward- rectifying shaker-like potassium channel that mainly functions in stomatal opening. Interestingly, overexpression of OsKAT2(T235R) did not cause serious defects in growth or yield in rice, suggesting that OsKAT2 is a potential target for engineering plants with improved drought tolerance without yield penalty."}

OryzaGP

{"project":"OryzaGP","denotations":[{"id":"T1","span":{"begin":20,"end":26},"obj":"gene"},{"id":"T2","span":{"begin":384,"end":390},"obj":"gene"},{"id":"T3","span":{"begin":392,"end":398},"obj":"gene"},{"id":"T4","span":{"begin":404,"end":410},"obj":"gene"},{"id":"T5","span":{"begin":430,"end":436},"obj":"gene"},{"id":"T6","span":{"begin":1142,"end":1148},"obj":"gene"}],"text":"A Dominant Negative OsKAT2 Mutant Delays Light-Induced Stomatal Opening and Improves Drought Tolerance without Yield Penalty in Rice.\nStomata are the main gateways for water and air transport between leaves and the environment. Inward-rectifying potassium channels regulate photo-induced stomatal opening. Rice contains three inward rectifying shaker-like potassium channel proteins, OsKAT1, OsKAT2, and OsKAT3. Among these, only OsKAT2 is specifically expressed in guard cells. Here, we investigated the functions of OsKAT2 in stomatal regulation using three dominant negative mutant proteins, OsKAT2(T235R), OsKAT2(T285A) and OsKAT2(T285D), which are altered in amino acids in the channel pore and at a phosphorylation site. Yeast complementation and patch clamp assays showed that all three mutant proteins lost channel activity. However, among plants overexpressing these mutant proteins, only plants overexpressing OsKAT2(T235R) showed significantly less water loss than the control. Moreover, overexpression of this mutant protein led to delayed photo-induced stomatal opening and increased drought tolerance. Our results indicate that OsKAT2 is an inward- rectifying shaker-like potassium channel that mainly functions in stomatal opening. Interestingly, overexpression of OsKAT2(T235R) did not cause serious defects in growth or yield in rice, suggesting that OsKAT2 is a potential target for engineering plants with improved drought tolerance without yield penalty."}